RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 ZRANB1Q9UGI0 708 aa11.06□□□□□ -0.64
PRKCA-204ENST00000583361 BLMP54132 1417 aaPredicted RBP11.06□□□□□ -0.64
PRKCA-204ENST00000583361 EDC4Q6P2E9 1401 aaKnown RBP11.06□□□□□ -0.64
PRKCA-204ENST00000583361 PDE3BQ13370 1112 aa11.05□□□□□ -0.64
PRKCA-204ENST00000583361 TCP11L2Q8N4U5 519 aa11.05□□□□□ -0.64
PRKCA-204ENST00000583361 AATKQ6ZMQ8 1374 aa11.04□□□□□ -0.64
PRKCA-204ENST00000583361 NINLQ9Y2I6 1382 aa11.04□□□□□ -0.64
PRKCA-204ENST00000583361 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
PRKCA-204ENST00000583361 CRB1P82279 1406 aa11.04□□□□□ -0.64
PRKCA-204ENST00000583361 CDCA8Q53HL2 280 aa11.04□□□□□ -0.64
PRKCA-204ENST00000583361 PUS7Q96PZ0 661 aaKnown RBP11.04□□□□□ -0.64
PRKCA-204ENST00000583361 NFAT5O94916 1531 aa11.04□□□□□ -0.64
PRKCA-204ENST00000583361 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
PRKCA-204ENST00000583361 TNS1Q9HBL0 1735 aaKnown RBP11.03□□□□□ -0.64
PRKCA-204ENST00000583361 MYOM1P52179 1685 aa11.02□□□□□ -0.64
PRKCA-204ENST00000583361 BAG6P46379 1132 aa11.02□□□□□ -0.65
PRKCA-204ENST00000583361 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
PRKCA-204ENST00000583361 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.65
PRKCA-204ENST00000583361 COG3Q96JB2 828 aa11.02□□□□□ -0.65
PRKCA-204ENST00000583361 AXIN2Q9Y2T1 843 aa11.02□□□□□ -0.65
PRKCA-204ENST00000583361 THRAP3Q9Y2W1 955 aaKnown RBP11.02□□□□□ -0.65
PRKCA-204ENST00000583361 USP31Q70CQ4 1352 aa11.02□□□□□ -0.65
PRKCA-204ENST00000583361 WDR17Q8IZU2 1322 aa11.01□□□□□ -0.65
PRKCA-204ENST00000583361 LRRC37A3O60309 1634 aa11.01□□□□□ -0.65
PRKCA-204ENST00000583361 ANKRD36BQ8N2N9 1353 aa11.01□□□□□ -0.65
PRKCA-204ENST00000583361 SBF2Q86WG5 1849 aa11□□□□□ -0.65
PRKCA-204ENST00000583361 FAM196AQ6ZSG2 479 aa11□□□□□ -0.65
PRKCA-204ENST00000583361 RGPD2P0DJD1 1756 aa11□□□□□ -0.65
PRKCA-204ENST00000583361 OVOS2A0A0J9YW53 1432 aa11□□□□□ -0.65
PRKCA-204ENST00000583361 OVOS2Q6IE36 1432 aa11□□□□□ -0.65
PRKCA-204ENST00000583361 ABCC6O95255 1503 aa10.99□□□□□ -0.65
PRKCA-204ENST00000583361 FAM208AQ9UK61 1670 aaKnown RBP10.99□□□□□ -0.65
PRKCA-204ENST00000583361 TRIM37O94972 964 aa10.99□□□□□ -0.65
PRKCA-204ENST00000583361 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRKCA-204ENST00000583361 DDB1Q16531 1140 aa10.99□□□□□ -0.65
PRKCA-204ENST00000583361 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
PRKCA-204ENST00000583361 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
PRKCA-204ENST00000583361 NLRP2Q9NX02 1062 aa10.99□□□□□ -0.65
PRKCA-204ENST00000583361 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
PRKCA-204ENST00000583361 MAP2P11137 1827 aaKnown RBP10.98□□□□□ -0.65
PRKCA-204ENST00000583361 HSPA5P11021 654 aaKnown RBP10.97□□□□□ -0.65
PRKCA-204ENST00000583361 AMPHP49418 695 aa10.97□□□□□ -0.65
PRKCA-204ENST00000583361 ANKRD24Q8TF21 1146 aa10.97□□□□□ -0.65
PRKCA-204ENST00000583361 CARD10Q9BWT7 1032 aa10.97□□□□□ -0.65
PRKCA-204ENST00000583361 CCDC7Q96M83 1385 aa10.97□□□□□ -0.65
PRKCA-204ENST00000583361 OVOS2A0A0G2JMS6 1433 aa10.96□□□□□ -0.65
PRKCA-204ENST00000583361 NSD3Q9BZ95 1437 aa10.96□□□□□ -0.65
PRKCA-204ENST00000583361 APBA3O96018 575 aa10.96□□□□□ -0.65
PRKCA-204ENST00000583361 CDCA7Q9BWT1 371 aaPredicted RBP10.96□□□□□ -0.65
PRKCA-204ENST00000583361 ERBB3P21860 1342 aa10.95□□□□□ -0.66
PRKCA-204ENST00000583361 EXOC5O00471 708 aa10.95□□□□□ -0.66
PRKCA-204ENST00000583361 FBLN1P23142 703 aa10.95□□□□□ -0.66
PRKCA-204ENST00000583361 ANKRD26Q9UPS8 1709 aa10.95□□□□□ -0.66
PRKCA-204ENST00000583361 MAP3K19Q56UN5 1328 aa10.94□□□□□ -0.66
PRKCA-204ENST00000583361 FYB1O15117 783 aa10.94□□□□□ -0.66
PRKCA-204ENST00000583361 RRS1Q15050 365 aaKnown RBP10.94□□□□□ -0.66
PRKCA-204ENST00000583361 EZH2Q15910 746 aaKnown RBP10.94□□□□□ -0.66
PRKCA-204ENST00000583361 IP6K1Q92551 441 aa10.94□□□□□ -0.66
PRKCA-204ENST00000583361 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
PRKCA-204ENST00000583361 PSDA5PKW4 1024 aaPredicted RBP10.93□□□□□ -0.66
PRKCA-204ENST00000583361 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
PRKCA-204ENST00000583361 SMG6Q86US8 1419 aaKnown RBP10.92□□□□□ -0.66
PRKCA-204ENST00000583361 NUP188Q5SRE5 1749 aa10.92□□□□□ -0.66
PRKCA-204ENST00000583361 RREB1Q92766 1687 aa10.92□□□□□ -0.66
PRKCA-204ENST00000583361 IL2RBP14784 551 aa10.92□□□□□ -0.66
PRKCA-204ENST00000583361 HOXC9P31274 260 aa10.92□□□□□ -0.66
PRKCA-204ENST00000583361 TNS2Q63HR2 1409 aa10.92□□□□□ -0.66
PRKCA-204ENST00000583361 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
PRKCA-204ENST00000583361 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
PRKCA-204ENST00000583361 DISP2A7MBM2 1401 aa10.91□□□□□ -0.66
PRKCA-204ENST00000583361 CGNL1Q0VF96 1302 aa10.9□□□□□ -0.66
PRKCA-204ENST00000583361 CARD14Q9BXL6 1004 aa10.9□□□□□ -0.66
PRKCA-204ENST00000583361 RTL1A6NKG5 1358 aa10.9□□□□□ -0.67
PRKCA-204ENST00000583361 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
PRKCA-204ENST00000583361 BTAF1O14981 1849 aa10.89□□□□□ -0.67
PRKCA-204ENST00000583361 TNNT2P45379 298 aaPredicted RBP10.89□□□□□ -0.67
PRKCA-204ENST00000583361 R3HDM1Q15032 1099 aaKnown RBP10.89□□□□□ -0.67
PRKCA-204ENST00000583361 ACSBG1Q96GR2 724 aa10.89□□□□□ -0.67
PRKCA-204ENST00000583361 RGPD3A6NKT7 1758 aaPredicted RBP10.89□□□□□ -0.67
PRKCA-204ENST00000583361 RGPD4Q7Z3J3 1758 aa10.89□□□□□ -0.67
PRKCA-204ENST00000583361 PARD3Q8TEW0 1356 aa10.89□□□□□ -0.67
PRKCA-204ENST00000583361 NBPF14Q5TI25 921 aa10.88□□□□□ -0.67
PRKCA-204ENST00000583361 USHBP1Q8N6Y0 703 aa10.88□□□□□ -0.67
PRKCA-204ENST00000583361 DDX54Q8TDD1 881 aaKnown RBP10.88□□□□□ -0.67
PRKCA-204ENST00000583361 DOT1LQ8TEK3 1739 aa10.88□□□□□ -0.67
PRKCA-204ENST00000583361 CAMKK2Q96RR4 588 aa10.88□□□□□ -0.67
PRKCA-204ENST00000583361 FLT4P35916 1363 aa10.88□□□□□ -0.67
PRKCA-204ENST00000583361 SHANK3Q9BYB0 1731 aa10.87□□□□□ -0.67
PRKCA-204ENST00000583361 HSP90AB2PQ58FF8 381 aa10.87□□□□□ -0.67
PRKCA-204ENST00000583361 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
PRKCA-204ENST00000583361 PANK3Q9H999 370 aa10.87□□□□□ -0.67
PRKCA-204ENST00000583361 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
PRKCA-204ENST00000583361 RAPGEF4Q8WZA2 1011 aa10.86□□□□□ -0.67
PRKCA-204ENST00000583361 TATP17735 454 aaPredicted RBP10.85□□□□□ -0.67
PRKCA-204ENST00000583361 NBPF6Q5VWK0 638 aa10.85□□□□□ -0.67
PRKCA-204ENST00000583361 PTF1AQ7RTS3 328 aa10.85□□□□□ -0.67
PRKCA-204ENST00000583361 SYTL4Q96C24 671 aaPredicted RBP10.85□□□□□ -0.67
PRKCA-204ENST00000583361 NBPF4Q96M43 638 aa10.85□□□□□ -0.67
PRKCA-204ENST00000583361 INSRP06213 1382 aa10.85□□□□□ -0.67
PRKCA-204ENST00000583361 MEGF6O75095 1541 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms