RNA–Protein interactions for RNA: ENST00000581967.1

CTC1-210, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-210ENST00000581967 SLIT3O75094 1523 aa9.45□□□□□ -0.9
CTC1-210ENST00000581967 PARP4Q9UKK3 1724 aaKnown RBP9.45□□□□□ -0.9
CTC1-210ENST00000581967 KCNH5Q8NCM2 988 aa9.44□□□□□ -0.9
CTC1-210ENST00000581967 CARD10Q9BWT7 1032 aa9.44□□□□□ -0.9
CTC1-210ENST00000581967 PEAK1Q9H792 1746 aa9.44□□□□□ -0.9
CTC1-210ENST00000581967 EVC2Q86UK5 1308 aa9.43□□□□□ -0.9
CTC1-210ENST00000581967 ZNF692Q9BU19 519 aaPredicted RBP9.43□□□□□ -0.9
CTC1-210ENST00000581967 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
CTC1-210ENST00000581967 TTC21BQ7Z4L5 1316 aa9.42□□□□□ -0.9
CTC1-210ENST00000581967 EXOC5O00471 708 aa9.42□□□□□ -0.9
CTC1-210ENST00000581967 PTGER2P43116 358 aa9.42□□□□□ -0.9
CTC1-210ENST00000581967 PDGFDQ9GZP0 370 aaPredicted RBP9.42□□□□□ -0.9
CTC1-210ENST00000581967 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
CTC1-210ENST00000581967 TTC21AQ8NDW8 1320 aa9.41□□□□□ -0.9
CTC1-210ENST00000581967 ZBTB7AO95365 584 aa9.41□□□□□ -0.9
CTC1-210ENST00000581967 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
CTC1-210ENST00000581967 TXNRD1Q16881 649 aa9.41□□□□□ -0.9
CTC1-210ENST00000581967 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
CTC1-210ENST00000581967 STK32BQ9NY57 414 aa9.41□□□□□ -0.9
CTC1-210ENST00000581967 RGPD3A6NKT7 1758 aaPredicted RBP9.41□□□□□ -0.9
CTC1-210ENST00000581967 RGPD4Q7Z3J3 1758 aa9.41□□□□□ -0.9
CTC1-210ENST00000581967 SLC15A2Q16348 729 aa9.4□□□□□ -0.9
CTC1-210ENST00000581967 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.9
CTC1-210ENST00000581967 COL18A1P39060 1754 aa9.4□□□□□ -0.91
CTC1-210ENST00000581967 CCDC7Q96M83 1385 aa9.39□□□□□ -0.91
CTC1-210ENST00000581967 SOX12O15370 315 aa9.39□□□□□ -0.91
CTC1-210ENST00000581967 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
CTC1-210ENST00000581967 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
CTC1-210ENST00000581967 CASZ1Q86V15 1759 aa9.38□□□□□ -0.91
CTC1-210ENST00000581967 SGIP1Q9BQI5 828 aa9.38□□□□□ -0.91
CTC1-210ENST00000581967 SYT17Q9BSW7 474 aa9.38□□□□□ -0.91
CTC1-210ENST00000581967 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
CTC1-210ENST00000581967 QRICH2Q9H0J4 1663 aa9.38□□□□□ -0.91
CTC1-210ENST00000581967 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
CTC1-210ENST00000581967 TNS2Q63HR2 1409 aa9.37□□□□□ -0.91
CTC1-210ENST00000581967 NFAT5O94916 1531 aa9.36□□□□□ -0.91
CTC1-210ENST00000581967 SBF2Q86WG5 1849 aa9.36□□□□□ -0.91
CTC1-210ENST00000581967 ZNF784Q8NCA9 323 aaPredicted RBP9.36□□□□□ -0.91
CTC1-210ENST00000581967 NLRP2Q9NX02 1062 aa9.36□□□□□ -0.91
CTC1-210ENST00000581967 ROCK2O75116 1388 aaKnown RBP9.36□□□□□ -0.91
CTC1-210ENST00000581967 USP31Q70CQ4 1352 aa9.36□□□□□ -0.91
CTC1-210ENST00000581967 ABCC6O95255 1503 aa9.36□□□□□ -0.91
CTC1-210ENST00000581967 ERBB3P21860 1342 aa9.35□□□□□ -0.91
CTC1-210ENST00000581967 TRPM1Q7Z4N2 1603 aa9.35□□□□□ -0.91
CTC1-210ENST00000581967 IL2RBP14784 551 aa9.35□□□□□ -0.91
CTC1-210ENST00000581967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.35□□□□□ -0.91
CTC1-210ENST00000581967 ACSBG1Q96GR2 724 aa9.35□□□□□ -0.91
CTC1-210ENST00000581967 ARXQ96QS3 562 aa9.35□□□□□ -0.91
CTC1-210ENST00000581967 NME9Q86XW9 330 aa9.34□□□□□ -0.91
CTC1-210ENST00000581967 SIN3AQ96ST3 1273 aa9.34□□□□□ -0.91
CTC1-210ENST00000581967 MAP3K5Q99683 1374 aa9.34□□□□□ -0.91
CTC1-210ENST00000581967 MYOM1P52179 1685 aa9.33□□□□□ -0.92
CTC1-210ENST00000581967 ANKRD24Q8TF21 1146 aa9.33□□□□□ -0.92
CTC1-210ENST00000581967 SBNO2Q9Y2G9 1366 aa9.33□□□□□ -0.92
CTC1-210ENST00000581967 WNK3Q9BYP7 1800 aa9.33□□□□□ -0.92
CTC1-210ENST00000581967 NEUROD1Q13562 356 aa9.32□□□□□ -0.92
CTC1-210ENST00000581967 ZNF827Q17R98 1081 aa9.32□□□□□ -0.92
CTC1-210ENST00000581967 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
CTC1-210ENST00000581967 SLC27A3Q5K4L6 730 aa9.31□□□□□ -0.92
CTC1-210ENST00000581967 HDGFL2Q7Z4V5 671 aaPredicted RBP9.31□□□□□ -0.92
CTC1-210ENST00000581967 SLC16A10Q8TF71 515 aa9.31□□□□□ -0.92
CTC1-210ENST00000581967 AKT1S1Q96B36 256 aa9.31□□□□□ -0.92
CTC1-210ENST00000581967 SLC12A5Q9H2X9 1139 aa9.31□□□□□ -0.92
CTC1-210ENST00000581967 CD163L1Q9NR16 1453 aa9.31□□□□□ -0.92
CTC1-210ENST00000581967 AKAP12Q02952 1782 aa9.31□□□□□ -0.92
CTC1-210ENST00000581967 NHSQ6T4R5 1651 aa9.3□□□□□ -0.92
CTC1-210ENST00000581967 C1QTNF8P60827 252 aa9.3□□□□□ -0.92
CTC1-210ENST00000581967 TMC1Q8TDI8 760 aa9.3□□□□□ -0.92
CTC1-210ENST00000581967 IP6K1Q92551 441 aa9.3□□□□□ -0.92
CTC1-210ENST00000581967 PUS7Q96PZ0 661 aaKnown RBP9.3□□□□□ -0.92
CTC1-210ENST00000581967 TERF2IPQ9NYB0 399 aa9.3□□□□□ -0.92
CTC1-210ENST00000581967 EDC4Q6P2E9 1401 aaKnown RBP9.3□□□□□ -0.92
CTC1-210ENST00000581967 RGPD5Q99666 1765 aa9.29□□□□□ -0.92
CTC1-210ENST00000581967 GPR162Q16538 588 aa9.29□□□□□ -0.92
CTC1-210ENST00000581967 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
CTC1-210ENST00000581967 CARD11Q9BXL7 1154 aa9.29□□□□□ -0.92
CTC1-210ENST00000581967 PAPPAQ13219 1627 aa9.29□□□□□ -0.92
CTC1-210ENST00000581967 POLD1P28340 1107 aa9.28□□□□□ -0.92
CTC1-210ENST00000581967 PRIM1P49642 420 aaKnown RBP9.28□□□□□ -0.92
CTC1-210ENST00000581967 PNPLA7Q6ZV29 1317 aa9.28□□□□□ -0.92
CTC1-210ENST00000581967 MON2Q7Z3U7 1717 aa9.28□□□□□ -0.92
CTC1-210ENST00000581967 USP54Q70EL1 1684 aa9.27□□□□□ -0.93
CTC1-210ENST00000581967 SENP3-EIF4A1A0A087X0R7 540 aa9.27□□□□□ -0.93
CTC1-210ENST00000581967 TFCP2L1Q9NZI6 479 aa9.27□□□□□ -0.93
CTC1-210ENST00000581967 A0A1W2PP64 1363 aa9.26□□□□□ -0.93
CTC1-210ENST00000581967 ANKRD36BQ8N2N9 1353 aa9.26□□□□□ -0.93
CTC1-210ENST00000581967 KCNQ4P56696 695 aa9.26□□□□□ -0.93
CTC1-210ENST00000581967 SYTL4Q96C24 671 aaPredicted RBP9.26□□□□□ -0.93
CTC1-210ENST00000581967 LTV1Q96GA3 475 aaPredicted RBP9.26□□□□□ -0.93
CTC1-210ENST00000581967 MAP3K19Q56UN5 1328 aa9.26□□□□□ -0.93
CTC1-210ENST00000581967 HOXC9P31274 260 aa9.25□□□□□ -0.93
CTC1-210ENST00000581967 KLHL34Q8N239 644 aa9.25□□□□□ -0.93
CTC1-210ENST00000581967 ZCRB1Q8TBF4 217 aaKnown RBP9.25□□□□□ -0.93
CTC1-210ENST00000581967 COG3Q96JB2 828 aa9.25□□□□□ -0.93
CTC1-210ENST00000581967 BTAF1O14981 1849 aa9.25□□□□□ -0.93
CTC1-210ENST00000581967 NSD2O96028 1365 aa9.24□□□□□ -0.93
CTC1-210ENST00000581967 AMPHP49418 695 aa9.24□□□□□ -0.93
CTC1-210ENST00000581967 PELP1Q8IZL8 1130 aaKnown RBP9.24□□□□□ -0.93
CTC1-210ENST00000581967 NLGN2Q8NFZ4 835 aa9.24□□□□□ -0.93
CTC1-210ENST00000581967 CCNL1Q9UK58 526 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms