RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 FHAD1B1AJZ9 1412 aa10.08□□□□□ -0.8
TVP23B-209ENST00000581733 VPS8Q8N3P4 1428 aa10.08□□□□□ -0.8
TVP23B-209ENST00000581733 MPNDQ8N594 471 aa10.08□□□□□ -0.8
TVP23B-209ENST00000581733 KLF16Q9BXK1 252 aaPredicted RBP10.08□□□□□ -0.8
TVP23B-209ENST00000581733 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
TVP23B-209ENST00000581733 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
TVP23B-209ENST00000581733 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
TVP23B-209ENST00000581733 ZIC2O95409 532 aaPredicted RBP10.07□□□□□ -0.8
TVP23B-209ENST00000581733 RASSF7Q02833 373 aa10.07□□□□□ -0.8
TVP23B-209ENST00000581733 ARID5BQ14865 1188 aa10.07□□□□□ -0.8
TVP23B-209ENST00000581733 AQRO60306 1485 aaKnown RBP eCLIP10.06□□□□□ -0.8
TVP23B-209ENST00000581733 CLCN1P35523 988 aa10.06□□□□□ -0.8
TVP23B-209ENST00000581733 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
TVP23B-209ENST00000581733 BARGINQ6ZT62 677 aa10.05□□□□□ -0.8
TVP23B-209ENST00000581733 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
TVP23B-209ENST00000581733 FAM174AQ8TBP5 190 aa10.05□□□□□ -0.8
TVP23B-209ENST00000581733 CCDC102AQ96A19 550 aa10.05□□□□□ -0.8
TVP23B-209ENST00000581733 IQGAP2Q13576 1575 aa10.05□□□□□ -0.8
TVP23B-209ENST00000581733 MINK1Q8N4C8 1332 aaPredicted RBP10.05□□□□□ -0.8
TVP23B-209ENST00000581733 ARAP1Q96P48 1450 aa10.04□□□□□ -0.8
TVP23B-209ENST00000581733 BMP2P12643 396 aa10.04□□□□□ -0.8
TVP23B-209ENST00000581733 ITPKCQ96DU7 683 aa10.04□□□□□ -0.8
TVP23B-209ENST00000581733 SAMD9Q5K651 1589 aa10.04□□□□□ -0.8
TVP23B-209ENST00000581733 SNAPC4Q5SXM2 1469 aa10.04□□□□□ -0.8
TVP23B-209ENST00000581733 ARHGAP35Q9NRY4 1499 aa10.04□□□□□ -0.8
TVP23B-209ENST00000581733 NDUFV2P19404 249 aa10.03□□□□□ -0.8
TVP23B-209ENST00000581733 KRI1Q8N9T8 703 aaKnown RBP10.03□□□□□ -0.8
TVP23B-209ENST00000581733 CFAP43Q8NDM7 1665 aa10.02□□□□□ -0.8
TVP23B-209ENST00000581733 CTHP32929 405 aa10.02□□□□□ -0.81
TVP23B-209ENST00000581733 CNTNAP3BQ96NU0 1288 aa10.02□□□□□ -0.81
TVP23B-209ENST00000581733 CNTNAP3Q9BZ76 1288 aa10.02□□□□□ -0.81
TVP23B-209ENST00000581733 ADAMTS8Q9UP79 889 aa10.02□□□□□ -0.81
TVP23B-209ENST00000581733 RNF225M0QZC1 329 aaPredicted RBP10.01□□□□□ -0.81
TVP23B-209ENST00000581733 NR3C2P08235 984 aa10.01□□□□□ -0.81
TVP23B-209ENST00000581733 KRT76Q01546 638 aa10.01□□□□□ -0.81
TVP23B-209ENST00000581733 CHD1O14646 1710 aa10.01□□□□□ -0.81
TVP23B-209ENST00000581733 SYNJ2O15056 1496 aa10□□□□□ -0.81
TVP23B-209ENST00000581733 GRIN2AQ12879 1464 aa10□□□□□ -0.81
TVP23B-209ENST00000581733 UPP2O95045 317 aa10□□□□□ -0.81
TVP23B-209ENST00000581733 TRIM26Q12899 539 aaPredicted RBP10□□□□□ -0.81
TVP23B-209ENST00000581733 GPR161Q8N6U8 529 aaKnown RBP10□□□□□ -0.81
TVP23B-209ENST00000581733 FOXJ1Q92949 421 aa10□□□□□ -0.81
TVP23B-209ENST00000581733 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
TVP23B-209ENST00000581733 CDK15Q96Q40 435 aa9.99□□□□□ -0.81
TVP23B-209ENST00000581733 DNMT3LQ9UJW3 386 aa9.99□□□□□ -0.81
TVP23B-209ENST00000581733 MOXD2PA6NHM9 499 aa9.98□□□□□ -0.81
TVP23B-209ENST00000581733 LINC00528Q8N1L1 170 aa9.98□□□□□ -0.81
TVP23B-209ENST00000581733 SLC24A3Q9HC58 644 aa9.98□□□□□ -0.81
TVP23B-209ENST00000581733 PCF11O94913 1555 aaKnown RBP9.97□□□□□ -0.81
TVP23B-209ENST00000581733 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
TVP23B-209ENST00000581733 MTMR2Q13614 643 aa9.97□□□□□ -0.81
TVP23B-209ENST00000581733 NR5A1Q13285 461 aa9.96□□□□□ -0.82
TVP23B-209ENST00000581733 DESI1Q6ICB0 168 aa9.96□□□□□ -0.82
TVP23B-209ENST00000581733 GPAT2Q6NUI2 795 aa9.96□□□□□ -0.82
TVP23B-209ENST00000581733 SOS2Q07890 1332 aaPredicted RBP9.96□□□□□ -0.82
TVP23B-209ENST00000581733 FYCO1Q9BQS8 1478 aa9.96□□□□□ -0.82
TVP23B-209ENST00000581733 MAP3K1Q13233 1512 aa9.96□□□□□ -0.82
TVP23B-209ENST00000581733 UGGT2Q9NYU1 1516 aa9.96□□□□□ -0.82
TVP23B-209ENST00000581733 AGERQ15109 404 aa9.95□□□□□ -0.82
TVP23B-209ENST00000581733 MEIOBQ8N635 442 aa9.95□□□□□ -0.82
TVP23B-209ENST00000581733 FMN1Q68DA7 1419 aa9.95□□□□□ -0.82
TVP23B-209ENST00000581733 KIAA0586Q9BVV6 1533 aa9.95□□□□□ -0.82
TVP23B-209ENST00000581733 TIAM1Q13009 1591 aa9.95□□□□□ -0.82
TVP23B-209ENST00000581733 CEP170Q5SW79 1584 aa9.94□□□□□ -0.82
TVP23B-209ENST00000581733 SSTR3P32745 418 aaPredicted RBP9.94□□□□□ -0.82
TVP23B-209ENST00000581733 AK7Q96M32 723 aa9.94□□□□□ -0.82
TVP23B-209ENST00000581733 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
TVP23B-209ENST00000581733 KIAA0556O60303 1618 aa9.93□□□□□ -0.82
TVP23B-209ENST00000581733 IRS1P35568 1242 aa9.93□□□□□ -0.82
TVP23B-209ENST00000581733 GRM5P41594 1212 aa9.93□□□□□ -0.82
TVP23B-209ENST00000581733 BRPF1P55201 1214 aaPredicted RBP9.93□□□□□ -0.82
TVP23B-209ENST00000581733 SVOPQ8N4V2 548 aa9.93□□□□□ -0.82
TVP23B-209ENST00000581733 PCGF6Q9BYE7 350 aa9.93□□□□□ -0.82
TVP23B-209ENST00000581733 MAP10Q9P2G4 905 aa9.93□□□□□ -0.82
TVP23B-209ENST00000581733 HECW1Q76N89 1606 aa9.93□□□□□ -0.82
TVP23B-209ENST00000581733 SPDYE5A6NIY4 337 aa9.92□□□□□ -0.82
TVP23B-209ENST00000581733 SPTLC1O15269 473 aa9.92□□□□□ -0.82
TVP23B-209ENST00000581733 ZNF385CQ66K41 422 aaPredicted RBP9.92□□□□□ -0.82
TVP23B-209ENST00000581733 LYPD8Q6UX82 237 aa9.92□□□□□ -0.82
TVP23B-209ENST00000581733 LRRIQ1Q96JM4 1722 aa9.92□□□□□ -0.82
TVP23B-209ENST00000581733 FHOD3Q2V2M9 1422 aa9.91□□□□□ -0.82
TVP23B-209ENST00000581733 PTSQ03393 145 aa9.91□□□□□ -0.82
TVP23B-209ENST00000581733 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
TVP23B-209ENST00000581733 NUP160Q12769 1436 aa9.9□□□□□ -0.82
TVP23B-209ENST00000581733 CASKIN1Q8WXD9 1431 aa9.9□□□□□ -0.82
TVP23B-209ENST00000581733 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.9□□□□□ -0.82
TVP23B-209ENST00000581733 RNFT1Q5M7Z0 435 aa9.9□□□□□ -0.82
TVP23B-209ENST00000581733 CHMP7Q8WUX9 453 aaPredicted RBP9.9□□□□□ -0.82
TVP23B-209ENST00000581733 FIGNL2A6NMB9 653 aa9.89□□□□□ -0.83
TVP23B-209ENST00000581733 WHAMMQ8TF30 809 aa9.89□□□□□ -0.83
TVP23B-209ENST00000581733 DNMT3AQ9Y6K1 912 aaPredicted RBP9.89□□□□□ -0.83
TVP23B-209ENST00000581733 CCDC18Q5T9S5 1454 aa9.88□□□□□ -0.83
TVP23B-209ENST00000581733 TTLL8A6PVC2 850 aa9.88□□□□□ -0.83
TVP23B-209ENST00000581733 FSHRP23945 695 aa9.88□□□□□ -0.83
TVP23B-209ENST00000581733 TMEM132AQ24JP5 1023 aa9.88□□□□□ -0.83
TVP23B-209ENST00000581733 TSEN34Q9BSV6 310 aaKnown RBP9.88□□□□□ -0.83
TVP23B-209ENST00000581733 CFAP99D6REC4 459 aa9.87□□□□□ -0.83
TVP23B-209ENST00000581733 BPHLQ86WA6 291 aaPredicted RBP9.87□□□□□ -0.83
TVP23B-209ENST00000581733 RAPGEF6Q8TEU7 1601 aa9.86□□□□□ -0.83
TVP23B-209ENST00000581733 F12P00748 615 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms