RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 MAPK1P28482 360 aa11.21□□□□□ -0.61
SUPT4H1-207ENST00000581540 HLA-CQ95604 372 aa11.21□□□□□ -0.61
SUPT4H1-207ENST00000581540 ASB16Q96NS5 453 aa11.21□□□□□ -0.61
SUPT4H1-207ENST00000581540 POLR3GLQ9BT43 218 aa11.21□□□□□ -0.61
SUPT4H1-207ENST00000581540 PPP1R3GB7ZBB8 358 aa11.2□□□□□ -0.62
SUPT4H1-207ENST00000581540 H3BRB1 525 aa11.2□□□□□ -0.62
SUPT4H1-207ENST00000581540 GLYCTKQ8IVS8 523 aa11.2□□□□□ -0.62
SUPT4H1-207ENST00000581540 TUT1Q9H6E5 874 aaKnown RBP11.2□□□□□ -0.62
SUPT4H1-207ENST00000581540 ABCC10Q5T3U5 1492 aa11.19□□□□□ -0.62
SUPT4H1-207ENST00000581540 ABL1P00519 1130 aa11.19□□□□□ -0.62
SUPT4H1-207ENST00000581540 NCOA4Q13772 614 aa11.19□□□□□ -0.62
SUPT4H1-207ENST00000581540 ANKRD62A6NC57 917 aa11.18□□□□□ -0.62
SUPT4H1-207ENST00000581540 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
SUPT4H1-207ENST00000581540 COL9A1P20849 921 aa11.18□□□□□ -0.62
SUPT4H1-207ENST00000581540 SLFNL1Q499Z3 407 aa11.18□□□□□ -0.62
SUPT4H1-207ENST00000581540 DCTN4Q9UJW0 460 aa11.18□□□□□ -0.62
SUPT4H1-207ENST00000581540 C7P10643 843 aa11.17□□□□□ -0.62
SUPT4H1-207ENST00000581540 SLC4A3P48751 1232 aa11.17□□□□□ -0.62
SUPT4H1-207ENST00000581540 TRIM50Q86XT4 487 aa11.17□□□□□ -0.62
SUPT4H1-207ENST00000581540 FAM174AQ8TBP5 190 aa11.17□□□□□ -0.62
SUPT4H1-207ENST00000581540 MAPKBP1O60336 1514 aa11.17□□□□□ -0.62
SUPT4H1-207ENST00000581540 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
SUPT4H1-207ENST00000581540 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
SUPT4H1-207ENST00000581540 PER1O15534 1290 aaPredicted RBP11.16□□□□□ -0.62
SUPT4H1-207ENST00000581540 ICMTO60725 284 aa11.16□□□□□ -0.62
SUPT4H1-207ENST00000581540 DPYDQ12882 1025 aa11.16□□□□□ -0.62
SUPT4H1-207ENST00000581540 EAPPQ56P03 285 aaPredicted RBP11.16□□□□□ -0.62
SUPT4H1-207ENST00000581540 DESI1Q6ICB0 168 aa11.16□□□□□ -0.62
SUPT4H1-207ENST00000581540 KDM6BO15054 1643 aa11.16□□□□□ -0.62
SUPT4H1-207ENST00000581540 SCAMP3O14828 347 aaKnown RBP11.15□□□□□ -0.62
SUPT4H1-207ENST00000581540 ITGAEP38570 1179 aa11.15□□□□□ -0.62
SUPT4H1-207ENST00000581540 ATP1A2P50993 1020 aa11.15□□□□□ -0.62
SUPT4H1-207ENST00000581540 MCCD1P59942 119 aaPredicted RBP11.15□□□□□ -0.62
SUPT4H1-207ENST00000581540 HIRIP3Q9BW71 556 aaPredicted RBP11.15□□□□□ -0.62
SUPT4H1-207ENST00000581540 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
SUPT4H1-207ENST00000581540 EML3Q32P44 896 aa11.14□□□□□ -0.63
SUPT4H1-207ENST00000581540 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
SUPT4H1-207ENST00000581540 DIP2BQ9P265 1576 aa11.14□□□□□ -0.63
SUPT4H1-207ENST00000581540 FHAD1B1AJZ9 1412 aa11.13□□□□□ -0.63
SUPT4H1-207ENST00000581540 C21orf2O43822 256 aa11.13□□□□□ -0.63
SUPT4H1-207ENST00000581540 PTPREP23469 700 aa11.13□□□□□ -0.63
SUPT4H1-207ENST00000581540 RETREG3Q86VR2 466 aa11.13□□□□□ -0.63
SUPT4H1-207ENST00000581540 OGFOD1Q8N543 542 aa11.13□□□□□ -0.63
SUPT4H1-207ENST00000581540 BCL2L12Q9HB09 334 aa11.13□□□□□ -0.63
SUPT4H1-207ENST00000581540 FKBPLQ9UIM3 349 aa11.13□□□□□ -0.63
SUPT4H1-207ENST00000581540 SLC10A3P09131 477 aa11.12□□□□□ -0.63
SUPT4H1-207ENST00000581540 ZNF211Q13398 564 aaPredicted RBP11.12□□□□□ -0.63
SUPT4H1-207ENST00000581540 MAP7D1Q3KQU3 841 aa11.12□□□□□ -0.63
SUPT4H1-207ENST00000581540 TAS1R3Q7RTX0 852 aa11.12□□□□□ -0.63
SUPT4H1-207ENST00000581540 NOP9Q86U38 636 aaKnown RBP11.12□□□□□ -0.63
SUPT4H1-207ENST00000581540 PLPP7Q8NBV4 271 aa11.12□□□□□ -0.63
SUPT4H1-207ENST00000581540 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
SUPT4H1-207ENST00000581540 RBM19Q9Y4C8 960 aaKnown RBP11.12□□□□□ -0.63
SUPT4H1-207ENST00000581540 PRG4Q92954 1404 aaPredicted RBP11.11□□□□□ -0.63
SUPT4H1-207ENST00000581540 TAGLNQ01995 201 aaKnown RBP11.11□□□□□ -0.63
SUPT4H1-207ENST00000581540 DPH6Q7L8W6 267 aa11.11□□□□□ -0.63
SUPT4H1-207ENST00000581540 CXXC1Q9P0U4 656 aaPredicted RBP11.11□□□□□ -0.63
SUPT4H1-207ENST00000581540 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
SUPT4H1-207ENST00000581540 NUDT7P0C024 238 aa11.1□□□□□ -0.63
SUPT4H1-207ENST00000581540 FUT2Q10981 343 aa11.1□□□□□ -0.63
SUPT4H1-207ENST00000581540 LARGE2Q8N3Y3 721 aa11.1□□□□□ -0.63
SUPT4H1-207ENST00000581540 ZNF594Q96JF6 807 aaPredicted RBP11.1□□□□□ -0.63
SUPT4H1-207ENST00000581540 BACH2Q9BYV9 841 aa11.1□□□□□ -0.63
SUPT4H1-207ENST00000581540 CWC22Q9HCG8 908 aaKnown RBP11.1□□□□□ -0.63
SUPT4H1-207ENST00000581540 DNAAF2Q9NVR5 837 aaKnown RBP11.1□□□□□ -0.63
SUPT4H1-207ENST00000581540 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 PRMT3O60678 531 aa11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 SCNN1AP37088 669 aa11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 FGD1P98174 961 aa11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 LYPD8Q6UX82 237 aa11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 RGL4Q8IZJ4 473 aa11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 PIK3R5Q8WYR1 880 aa11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
SUPT4H1-207ENST00000581540 SMAPO00193 183 aa11.08□□□□□ -0.64
SUPT4H1-207ENST00000581540 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
SUPT4H1-207ENST00000581540 HDGFP51858 240 aaKnown RBP11.08□□□□□ -0.64
SUPT4H1-207ENST00000581540 HDLBPQ00341 1268 aaKnown RBP11.08□□□□□ -0.64
SUPT4H1-207ENST00000581540 GIMAP6Q6P9H5 292 aa11.08□□□□□ -0.64
SUPT4H1-207ENST00000581540 TANGO6Q9C0B7 1094 aa11.08□□□□□ -0.64
SUPT4H1-207ENST00000581540 NOD1Q9Y239 953 aa11.08□□□□□ -0.64
SUPT4H1-207ENST00000581540 TMA7Q9Y2S6 64 aaKnown RBP11.08□□□□□ -0.64
SUPT4H1-207ENST00000581540 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
SUPT4H1-207ENST00000581540 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
SUPT4H1-207ENST00000581540 CUEDC1Q9NWM3 386 aaPredicted RBP11.07□□□□□ -0.64
SUPT4H1-207ENST00000581540 TSPOAP1O95153 1857 aa11.06□□□□□ -0.64
SUPT4H1-207ENST00000581540 SEC13P55735 322 aa11.06□□□□□ -0.64
SUPT4H1-207ENST00000581540 MRPL58Q14197 206 aaKnown RBP11.06□□□□□ -0.64
SUPT4H1-207ENST00000581540 Q3C1V9 767 aa11.06□□□□□ -0.64
SUPT4H1-207ENST00000581540 SIX5Q8N196 739 aa11.06□□□□□ -0.64
SUPT4H1-207ENST00000581540 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
SUPT4H1-207ENST00000581540 GPSM3Q9Y4H4 160 aa11.06□□□□□ -0.64
SUPT4H1-207ENST00000581540 CLDN10P78369 228 aa11.05□□□□□ -0.64
SUPT4H1-207ENST00000581540 FKBP4Q02790 459 aaKnown RBP eCLIP11.05□□□□□ -0.64
SUPT4H1-207ENST00000581540 OCLNQ16625 522 aa11.05□□□□□ -0.64
SUPT4H1-207ENST00000581540 SWT1Q5T5J6 900 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-207ENST00000581540 ADCY10Q96PN6 1610 aa11.05□□□□□ -0.64
SUPT4H1-207ENST00000581540 KCNH2Q12809 1159 aa11.04□□□□□ -0.64
SUPT4H1-207ENST00000581540 GTF3C2Q8WUA4 911 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms