RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 KCNH5Q8NCM2 988 aa16.6■□□□□ 0.25
PPP4R1-219ENST00000581250 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
PPP4R1-219ENST00000581250 KIF20BQ96Q89 1820 aa16.59■□□□□ 0.25
PPP4R1-219ENST00000581250 ONECUT3O60422 494 aaPredicted RBP16.59■□□□□ 0.25
PPP4R1-219ENST00000581250 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
PPP4R1-219ENST00000581250 KRT27Q7Z3Y8 459 aa16.59■□□□□ 0.25
PPP4R1-219ENST00000581250 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
PPP4R1-219ENST00000581250 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
PPP4R1-219ENST00000581250 CRB1P82279 1406 aa16.57■□□□□ 0.24
PPP4R1-219ENST00000581250 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
PPP4R1-219ENST00000581250 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
PPP4R1-219ENST00000581250 ABCC6O95255 1503 aa16.55■□□□□ 0.24
PPP4R1-219ENST00000581250 TCP11L2Q8N4U5 519 aa16.55■□□□□ 0.24
PPP4R1-219ENST00000581250 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
PPP4R1-219ENST00000581250 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
PPP4R1-219ENST00000581250 COG3Q96JB2 828 aa16.54■□□□□ 0.24
PPP4R1-219ENST00000581250 PARP4Q9UKK3 1724 aaKnown RBP16.53■□□□□ 0.24
PPP4R1-219ENST00000581250 WDR17Q8IZU2 1322 aa16.53■□□□□ 0.24
PPP4R1-219ENST00000581250 CSB-PGBD3P0DP91 1061 aa16.53■□□□□ 0.24
PPP4R1-219ENST00000581250 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
PPP4R1-219ENST00000581250 LRRC37A3O60309 1634 aa16.52■□□□□ 0.24
PPP4R1-219ENST00000581250 BARGINQ6ZT62 677 aa16.52■□□□□ 0.24
PPP4R1-219ENST00000581250 BLMP54132 1417 aaPredicted RBP16.52■□□□□ 0.23
PPP4R1-219ENST00000581250 FBLN1P23142 703 aa16.51■□□□□ 0.23
PPP4R1-219ENST00000581250 FYB1O15117 783 aa16.5■□□□□ 0.23
PPP4R1-219ENST00000581250 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
PPP4R1-219ENST00000581250 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
PPP4R1-219ENST00000581250 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
PPP4R1-219ENST00000581250 ERBB3P21860 1342 aa16.48■□□□□ 0.23
PPP4R1-219ENST00000581250 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
PPP4R1-219ENST00000581250 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
PPP4R1-219ENST00000581250 C11orf95C9JLR9 678 aaPredicted RBP16.47■□□□□ 0.23
PPP4R1-219ENST00000581250 PDE3BQ13370 1112 aa16.47■□□□□ 0.23
PPP4R1-219ENST00000581250 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
PPP4R1-219ENST00000581250 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
PPP4R1-219ENST00000581250 ANKRD24Q8TF21 1146 aa16.47■□□□□ 0.23
PPP4R1-219ENST00000581250 DEFB132Q7Z7B7 95 aa16.46■□□□□ 0.23
PPP4R1-219ENST00000581250 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
PPP4R1-219ENST00000581250 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
PPP4R1-219ENST00000581250 CARD10Q9BWT7 1032 aa16.46■□□□□ 0.23
PPP4R1-219ENST00000581250 NLRP2Q9NX02 1062 aa16.46■□□□□ 0.23
PPP4R1-219ENST00000581250 FAM208AQ9UK61 1670 aaKnown RBP16.46■□□□□ 0.23
PPP4R1-219ENST00000581250 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.22
PPP4R1-219ENST00000581250 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
PPP4R1-219ENST00000581250 AMPHP49418 695 aa16.45■□□□□ 0.22
PPP4R1-219ENST00000581250 ANKRD26Q9UPS8 1709 aa16.45■□□□□ 0.22
PPP4R1-219ENST00000581250 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
PPP4R1-219ENST00000581250 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
PPP4R1-219ENST00000581250 IP6K1Q92551 441 aa16.44■□□□□ 0.22
PPP4R1-219ENST00000581250 CGNL1Q0VF96 1302 aa16.44■□□□□ 0.22
PPP4R1-219ENST00000581250 HOXC9P31274 260 aa16.43■□□□□ 0.22
PPP4R1-219ENST00000581250 DDB1Q16531 1140 aa16.43■□□□□ 0.22
PPP4R1-219ENST00000581250 RTL1A6NKG5 1358 aa16.42■□□□□ 0.22
PPP4R1-219ENST00000581250 TRIM37O94972 964 aa16.42■□□□□ 0.22
PPP4R1-219ENST00000581250 FAM196AQ6ZSG2 479 aa16.42■□□□□ 0.22
PPP4R1-219ENST00000581250 KIF7Q2M1P5 1343 aa16.42■□□□□ 0.22
PPP4R1-219ENST00000581250 PANK3Q9H999 370 aa16.41■□□□□ 0.22
PPP4R1-219ENST00000581250 OVOS2A0A0G2JMS6 1433 aa16.41■□□□□ 0.22
PPP4R1-219ENST00000581250 TNS2Q63HR2 1409 aa16.41■□□□□ 0.22
PPP4R1-219ENST00000581250 SBF2Q86WG5 1849 aa16.4■□□□□ 0.22
PPP4R1-219ENST00000581250 BAG6P46379 1132 aa16.4■□□□□ 0.22
PPP4R1-219ENST00000581250 CDCA7Q9BWT1 371 aaPredicted RBP16.39■□□□□ 0.21
PPP4R1-219ENST00000581250 EMILIN1Q9Y6C2 1016 aa16.39■□□□□ 0.21
PPP4R1-219ENST00000581250 MAP2P11137 1827 aaKnown RBP16.39■□□□□ 0.21
PPP4R1-219ENST00000581250 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
PPP4R1-219ENST00000581250 EN1Q05925 392 aaPredicted RBP16.38■□□□□ 0.21
PPP4R1-219ENST00000581250 FLT4P35916 1363 aa16.38■□□□□ 0.21
PPP4R1-219ENST00000581250 SMG6Q86US8 1419 aaKnown RBP16.37■□□□□ 0.21
PPP4R1-219ENST00000581250 PPM1GO15355 546 aaPredicted RBP16.37■□□□□ 0.21
PPP4R1-219ENST00000581250 IL2RBP14784 551 aa16.37■□□□□ 0.21
PPP4R1-219ENST00000581250 MARCH10Q8NA82 808 aaPredicted RBP16.37■□□□□ 0.21
PPP4R1-219ENST00000581250 HSP90AB2PQ58FF8 381 aa16.36■□□□□ 0.21
PPP4R1-219ENST00000581250 USHBP1Q8N6Y0 703 aa16.36■□□□□ 0.21
PPP4R1-219ENST00000581250 EXOC5O00471 708 aa16.35■□□□□ 0.21
PPP4R1-219ENST00000581250 APBA3O96018 575 aa16.35■□□□□ 0.21
PPP4R1-219ENST00000581250 INSRP06213 1382 aa16.35■□□□□ 0.21
PPP4R1-219ENST00000581250 MEGF6O75095 1541 aa16.35■□□□□ 0.21
PPP4R1-219ENST00000581250 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.21
PPP4R1-219ENST00000581250 EZH2Q15910 746 aaKnown RBP16.33■□□□□ 0.2
PPP4R1-219ENST00000581250 KIF24Q5T7B8 1368 aa16.33■□□□□ 0.2
PPP4R1-219ENST00000581250 RREB1Q92766 1687 aa16.33■□□□□ 0.2
PPP4R1-219ENST00000581250 KAT6BQ8WYB5 2073 aa16.33■□□□□ 0.2
PPP4R1-219ENST00000581250 NSD2O96028 1365 aa16.32■□□□□ 0.2
PPP4R1-219ENST00000581250 NBPF6Q5VWK0 638 aa16.32■□□□□ 0.2
PPP4R1-219ENST00000581250 PTF1AQ7RTS3 328 aa16.32■□□□□ 0.2
PPP4R1-219ENST00000581250 NBPF4Q96M43 638 aa16.32■□□□□ 0.2
PPP4R1-219ENST00000581250 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
PPP4R1-219ENST00000581250 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
PPP4R1-219ENST00000581250 NHSQ6T4R5 1651 aa16.31■□□□□ 0.2
PPP4R1-219ENST00000581250 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
PPP4R1-219ENST00000581250 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
PPP4R1-219ENST00000581250 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
PPP4R1-219ENST00000581250 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
PPP4R1-219ENST00000581250 MORC1Q86VD1 984 aa16.29■□□□□ 0.2
PPP4R1-219ENST00000581250 DDX54Q8TDD1 881 aaKnown RBP16.29■□□□□ 0.2
PPP4R1-219ENST00000581250 ACSBG1Q96GR2 724 aa16.29■□□□□ 0.2
PPP4R1-219ENST00000581250 BCL9O00512 1426 aa16.28■□□□□ 0.2
PPP4R1-219ENST00000581250 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
PPP4R1-219ENST00000581250 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
PPP4R1-219ENST00000581250 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms