RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TSR2Q969E8 191 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 PDCL2Q8N4E4 241 aa17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 USP8P40818 1118 aa17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 PDRG1Q9NUG6 133 aa17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
CSNK1D-217ENST00000581241 MSH5O43196 834 aa17.19■□□□□ 0.34
CSNK1D-217ENST00000581241 DEF6Q9H4E7 631 aa17.19■□□□□ 0.34
CSNK1D-217ENST00000581241 CCDC158Q5M9N0 1113 aa17.19■□□□□ 0.34
CSNK1D-217ENST00000581241 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.19■□□□□ 0.345e-10■□□□□ 9.7
CSNK1D-217ENST00000581241 SMTNL1A8MU46 457 aa17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 MPNDQ8N594 471 aa17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 MAP4K4O95819 1239 aaPredicted RBP17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 ATF7IPQ6VMQ6 1270 aa17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 CFAP45Q9UL16 551 aa17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 PNISRQ8TF01 805 aaKnown RBP17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 ARHGAP5Q13017 1502 aa17.18■□□□□ 0.34
CSNK1D-217ENST00000581241 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
CSNK1D-217ENST00000581241 IGF1RP08069 1367 aa17.17■□□□□ 0.34
CSNK1D-217ENST00000581241 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
CSNK1D-217ENST00000581241 EHBP1L1Q8N3D4 1523 aa17.17■□□□□ 0.34
CSNK1D-217ENST00000581241 KIF6Q6ZMV9 814 aa17.17■□□□□ 0.34
CSNK1D-217ENST00000581241 FAM177A1Q8N128 213 aaPredicted RBP17.17■□□□□ 0.34
CSNK1D-217ENST00000581241 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
CSNK1D-217ENST00000581241 CCDC69A6NI79 296 aa17.17■□□□□ 0.34
CSNK1D-217ENST00000581241 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
CSNK1D-217ENST00000581241 ERICH4A6NGS2 130 aa17.16■□□□□ 0.34
CSNK1D-217ENST00000581241 PDIA4P13667 645 aaKnown RBP17.16■□□□□ 0.34
CSNK1D-217ENST00000581241 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
CSNK1D-217ENST00000581241 FAM193AP78312 1265 aa17.16■□□□□ 0.34
CSNK1D-217ENST00000581241 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
CSNK1D-217ENST00000581241 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
CSNK1D-217ENST00000581241 UPF3BQ9BZI7 483 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-217ENST00000581241 KIAA1107Q9UPP5 1409 aa17.15■□□□□ 0.34
CSNK1D-217ENST00000581241 SEPT7Q16181 437 aaKnown RBP17.15■□□□□ 0.34
CSNK1D-217ENST00000581241 HFM1A2PYH4 1435 aa17.15■□□□□ 0.34
CSNK1D-217ENST00000581241 PLEKHO1Q53GL0 409 aaPredicted RBP17.14■□□□□ 0.34
CSNK1D-217ENST00000581241 SYCE3A1L190 88 aa17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 MAP3K11Q16584 847 aa17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 CCDC102AQ96A19 550 aa17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 NOL7Q9UMY1 257 aaKnown RBP17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 NEFHP12036 1026 aa17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 KIF2AO00139 706 aaPredicted RBP17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 CDKL5O76039 1030 aa17.14■□□□□ 0.33
CSNK1D-217ENST00000581241 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-217ENST00000581241 JAKMIP1Q96N16 626 aaKnown RBP17.13■□□□□ 0.33
CSNK1D-217ENST00000581241 CCDC148Q8NFR7 591 aa17.13■□□□□ 0.33
CSNK1D-217ENST00000581241 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
CSNK1D-217ENST00000581241 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
CSNK1D-217ENST00000581241 BLOC1S2Q6QNY1 142 aa17.13■□□□□ 0.33
CSNK1D-217ENST00000581241 WDR97A6NE52 1622 aa17.12■□□□□ 0.33
CSNK1D-217ENST00000581241 IKQ13123 557 aaPredicted RBP17.12■□□□□ 0.33
CSNK1D-217ENST00000581241 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
CSNK1D-217ENST00000581241 PODXL2Q9NZ53 605 aa17.12■□□□□ 0.33
CSNK1D-217ENST00000581241 TMCO3Q6UWJ1 677 aa17.11■□□□□ 0.33
CSNK1D-217ENST00000581241 ZSCAN25Q6NSZ9 544 aa17.11■□□□□ 0.33
CSNK1D-217ENST00000581241 GBP3Q9H0R5 595 aa17.11■□□□□ 0.33
CSNK1D-217ENST00000581241 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
CSNK1D-217ENST00000581241 CGNQ9P2M7 1197 aaKnown RBP17.11■□□□□ 0.33
CSNK1D-217ENST00000581241 CENPHQ9H3R5 247 aa17.11■□□□□ 0.33
CSNK1D-217ENST00000581241 KRT32Q14532 448 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 CCDC183Q5T5S1 534 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 UBXN4Q92575 508 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 CNNM1Q9NRU3 951 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 PLEKHH1Q9ULM0 1364 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 CCDC57Q2TAC2 916 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 EPB41L2O43491 1005 aaKnown RBP17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 CASQ1P31415 396 aa17.1■□□□□ 0.33
CSNK1D-217ENST00000581241 NLRP6P59044 892 aa17.09■□□□□ 0.33
CSNK1D-217ENST00000581241 GNL3LQ9NVN8 582 aaKnown RBP17.09■□□□□ 0.33
CSNK1D-217ENST00000581241 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
CSNK1D-217ENST00000581241 KIAA1328Q86T90 577 aa17.09■□□□□ 0.33
CSNK1D-217ENST00000581241 HDGFL1Q5TGJ6 251 aa17.09■□□□□ 0.33
CSNK1D-217ENST00000581241 AACSQ86V21 672 aa17.09■□□□□ 0.33
CSNK1D-217ENST00000581241 INCENPQ9NQS7 918 aa17.09■□□□□ 0.33
CSNK1D-217ENST00000581241 SLFN5Q08AF3 891 aa17.08■□□□□ 0.33
CSNK1D-217ENST00000581241 PTPN14Q15678 1187 aa17.08■□□□□ 0.33
CSNK1D-217ENST00000581241 FILIP1Q7Z7B0 1213 aa17.08■□□□□ 0.33
CSNK1D-217ENST00000581241 ARAP1Q96P48 1450 aa17.08■□□□□ 0.33
CSNK1D-217ENST00000581241 CWC27Q6UX04 472 aaKnown RBP17.08■□□□□ 0.33
CSNK1D-217ENST00000581241 CBX1P83916 185 aa17.08■□□□□ 0.32
CSNK1D-217ENST00000581241 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
CSNK1D-217ENST00000581241 SIL1Q9H173 461 aa17.08■□□□□ 0.32
CSNK1D-217ENST00000581241 ZSCAN12O43309 604 aa17.08■□□□□ 0.32
CSNK1D-217ENST00000581241 CFTRP13569 1480 aa17.08■□□□□ 0.32
CSNK1D-217ENST00000581241 EFCAB5A4FU69 1503 aa17.08■□□□□ 0.32
CSNK1D-217ENST00000581241 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
CSNK1D-217ENST00000581241 WASF1Q92558 559 aa17.07■□□□□ 0.32
CSNK1D-217ENST00000581241 ANKRD62A6NC57 917 aa17.07■□□□□ 0.32
CSNK1D-217ENST00000581241 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
CSNK1D-217ENST00000581241 CAMK4Q16566 473 aa17.07■□□□□ 0.32
CSNK1D-217ENST00000581241 TAX1BP1Q86VP1 789 aa17.07■□□□□ 0.32
CSNK1D-217ENST00000581241 CASTP20810 708 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-217ENST00000581241 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms