RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 WASF2Q9Y6W5 498 aa8.86□□□□□ -0.99
NF1-220ENST00000581113 J3QL48 77 aa8.85□□□□□ -0.99
NF1-220ENST00000581113 ADH1CP00326 375 aa8.85□□□□□ -0.99
NF1-220ENST00000581113 FSHRP23945 695 aa8.85□□□□□ -0.99
NF1-220ENST00000581113 RAB15P59190 212 aa8.85□□□□□ -0.99
NF1-220ENST00000581113 MPNDQ8N594 471 aa8.85□□□□□ -0.99
NF1-220ENST00000581113 ADAMTS19Q8TE59 1207 aa8.85□□□□□ -0.99
NF1-220ENST00000581113 CALR3Q96L12 384 aaKnown RBP8.85□□□□□ -0.99
NF1-220ENST00000581113 ALG2Q9H553 416 aa8.85□□□□□ -0.99
NF1-220ENST00000581113 TOR4AQ9NXH8 423 aa8.85□□□□□ -0.99
NF1-220ENST00000581113 CEP126Q9P2H0 1117 aa8.84□□□□□ -0.99
NF1-220ENST00000581113 SUPT5HO00267 1087 aaKnown RBP8.83□□□□□ -1
NF1-220ENST00000581113 GFRA3O60609 400 aa8.83□□□□□ -1
NF1-220ENST00000581113 GIGYF1O75420 1035 aaPredicted RBP8.83□□□□□ -1
NF1-220ENST00000581113 GRM5P41594 1212 aa8.83□□□□□ -1
NF1-220ENST00000581113 SLFNL1Q499Z3 407 aa8.82□□□□□ -1
NF1-220ENST00000581113 FAM187AA6NFU0 413 aa8.81□□□□□ -1
NF1-220ENST00000581113 SMPD1P17405 629 aa8.81□□□□□ -1
NF1-220ENST00000581113 NR5A1Q13285 461 aa8.81□□□□□ -1
NF1-220ENST00000581113 NNTQ13423 1086 aa8.81□□□□□ -1
NF1-220ENST00000581113 INTS6LQ5JSJ4 861 aaKnown RBP8.81□□□□□ -1
NF1-220ENST00000581113 ESPNB1AK53 854 aa8.8□□□□□ -1
NF1-220ENST00000581113 NR3C2P08235 984 aa8.8□□□□□ -1
NF1-220ENST00000581113 RNF135Q8IUD6 432 aa8.8□□□□□ -1
NF1-220ENST00000581113 RNF20Q5VTR2 975 aa8.79□□□□□ -1
NF1-220ENST00000581113 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
NF1-220ENST00000581113 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
NF1-220ENST00000581113 IRX2Q9BZI1 471 aaPredicted RBP8.79□□□□□ -1
NF1-220ENST00000581113 PIK3CDO00329 1044 aa8.78□□□□□ -1
NF1-220ENST00000581113 NRG2O14511 850 aaPredicted RBP8.78□□□□□ -1
NF1-220ENST00000581113 ERVH48-1M5A8F1 160 aa8.77□□□□□ -1
NF1-220ENST00000581113 DHX9Q08211 1270 aaKnown RBP8.77□□□□□ -1
NF1-220ENST00000581113 PKDCCQ504Y2 493 aa8.77□□□□□ -1
NF1-220ENST00000581113 HPS1Q92902 700 aa8.77□□□□□ -1
NF1-220ENST00000581113 UCN2Q96RP3 112 aa8.77□□□□□ -1
NF1-220ENST00000581113 LAPTM4AQ15012 233 aa8.77□□□□□ -1.01
NF1-220ENST00000581113 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
NF1-220ENST00000581113 PHTF2Q8N3S3 785 aa8.77□□□□□ -1.01
NF1-220ENST00000581113 C1orf115Q9H7X2 142 aa8.77□□□□□ -1.01
NF1-220ENST00000581113 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
NF1-220ENST00000581113 SKIP12755 728 aa8.76□□□□□ -1.01
NF1-220ENST00000581113 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
NF1-220ENST00000581113 TMPRSS4Q9NRS4 437 aa8.76□□□□□ -1.01
NF1-220ENST00000581113 WDR4P57081 412 aaKnown RBP8.75□□□□□ -1.01
NF1-220ENST00000581113 TSGA10IPQ3SY00 556 aa8.75□□□□□ -1.01
NF1-220ENST00000581113 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
NF1-220ENST00000581113 DOLKQ9UPQ8 538 aa8.75□□□□□ -1.01
NF1-220ENST00000581113 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
NF1-220ENST00000581113 TBC1D9Q6ZT07 1266 aa8.74□□□□□ -1.01
NF1-220ENST00000581113 CCDC125Q86Z20 511 aa8.74□□□□□ -1.01
NF1-220ENST00000581113 CCDC82Q8N4S0 544 aa8.74□□□□□ -1.01
NF1-220ENST00000581113 PLPP7Q8NBV4 271 aa8.74□□□□□ -1.01
NF1-220ENST00000581113 PGPEP1Q9NXJ5 209 aa8.74□□□□□ -1.01
NF1-220ENST00000581113 TFIP11Q9UBB9 837 aaKnown RBP8.74□□□□□ -1.01
NF1-220ENST00000581113 ZIC2O95409 532 aaPredicted RBP8.73□□□□□ -1.01
NF1-220ENST00000581113 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
NF1-220ENST00000581113 NFATC2IPQ8NCF5 419 aa8.73□□□□□ -1.01
NF1-220ENST00000581113 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
NF1-220ENST00000581113 PPP1R12CQ9BZL4 782 aa8.73□□□□□ -1.01
NF1-220ENST00000581113 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
NF1-220ENST00000581113 ATP9BO43861 1147 aa8.72□□□□□ -1.01
NF1-220ENST00000581113 DGAT1O75907 488 aa8.72□□□□□ -1.01
NF1-220ENST00000581113 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
NF1-220ENST00000581113 DEPDC4Q8N2C3 294 aa8.72□□□□□ -1.01
NF1-220ENST00000581113 CDCA7Q9BWT1 371 aaPredicted RBP8.72□□□□□ -1.01
NF1-220ENST00000581113 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
NF1-220ENST00000581113 SERPINA10Q9UK55 444 aa8.72□□□□□ -1.01
NF1-220ENST00000581113 USP17L5A8MUK1 530 aa8.71□□□□□ -1.01
NF1-220ENST00000581113 TIMP2P16035 220 aa8.71□□□□□ -1.01
NF1-220ENST00000581113 MAP7D1Q3KQU3 841 aa8.71□□□□□ -1.01
NF1-220ENST00000581113 KLF16Q9BXK1 252 aaPredicted RBP8.71□□□□□ -1.01
NF1-220ENST00000581113 ESF1Q9H501 851 aaKnown RBP8.71□□□□□ -1.01
NF1-220ENST00000581113 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.01
NF1-220ENST00000581113 MYT1Q01538 1121 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 TRIM52Q96A61 297 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 ARID3AQ99856 593 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 CHIC2Q9UKJ5 165 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 USP17L3A6NCW0 530 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 USP17L4A6NCW7 530 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 CAPN5O15484 640 aaPredicted RBP8.7□□□□□ -1.02
NF1-220ENST00000581113 AVPP01185 164 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 SCTRP47872 440 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 NCOA4Q13772 614 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 TRAF7Q6Q0C0 670 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 USP17L2Q6R6M4 530 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 USP17L1Q7RTZ2 530 aa8.7□□□□□ -1.02
NF1-220ENST00000581113 MAFBQ9Y5Q3 323 aaPredicted RBP8.7□□□□□ -1.02
NF1-220ENST00000581113 MYCP01106 439 aaPredicted RBP8.69□□□□□ -1.02
NF1-220ENST00000581113 LMOD1P29536 600 aaPredicted RBP8.69□□□□□ -1.02
NF1-220ENST00000581113 ERVK-9P63128 1117 aa8.69□□□□□ -1.02
NF1-220ENST00000581113 EML3Q32P44 896 aa8.69□□□□□ -1.02
NF1-220ENST00000581113 CC2D2BQ6DHV5 1058 aa8.69□□□□□ -1.02
NF1-220ENST00000581113 LILRA1O75019 489 aa8.68□□□□□ -1.02
NF1-220ENST00000581113 RFX1P22670 979 aa8.68□□□□□ -1.02
NF1-220ENST00000581113 USP4Q13107 963 aa8.68□□□□□ -1.02
NF1-220ENST00000581113 CBLBQ13191 982 aa8.68□□□□□ -1.02
NF1-220ENST00000581113 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
NF1-220ENST00000581113 Q6ZNB5 142 aa8.68□□□□□ -1.02
NF1-220ENST00000581113 SIRT1Q96EB6 747 aa8.67□□□□□ -1.02
NF1-220ENST00000581113 AXIN1O15169 862 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms