RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 EN1Q05925 392 aaPredicted RBP30■■■□□ 2.39
CSNK1D-216ENST00000581108 TERF2IPQ9NYB0 399 aa30■■■□□ 2.39
CSNK1D-216ENST00000581108 NFAT5O94916 1531 aa30■■■□□ 2.39
CSNK1D-216ENST00000581108 USP31Q70CQ4 1352 aa30■■■□□ 2.39
CSNK1D-216ENST00000581108 TNS1Q9HBL0 1735 aaKnown RBP29.99■■■□□ 2.39
CSNK1D-216ENST00000581108 TRIM37O94972 964 aa29.99■■■□□ 2.39
CSNK1D-216ENST00000581108 PARP4Q9UKK3 1724 aaKnown RBP29.98■■■□□ 2.39
CSNK1D-216ENST00000581108 A0A1W2PP64 1363 aa29.98■■■□□ 2.39
CSNK1D-216ENST00000581108 WDR17Q8IZU2 1322 aa29.97■■■□□ 2.39
CSNK1D-216ENST00000581108 USP54Q70EL1 1684 aa29.96■■■□□ 2.39
CSNK1D-216ENST00000581108 EDC4Q6P2E9 1401 aaKnown RBP29.96■■■□□ 2.39
CSNK1D-216ENST00000581108 SLC24A1O60721 1099 aa29.95■■■□□ 2.39
CSNK1D-216ENST00000581108 USP47Q96K76 1375 aa29.92■■■□□ 2.38
CSNK1D-216ENST00000581108 CSB-PGBD3P0DP91 1061 aa29.92■■■□□ 2.38
CSNK1D-216ENST00000581108 DISP2A7MBM2 1401 aa29.91■■■□□ 2.38
CSNK1D-216ENST00000581108 LTN1O94822 1766 aa29.9■■■□□ 2.38
CSNK1D-216ENST00000581108 APBA3O96018 575 aa29.9■■■□□ 2.38
CSNK1D-216ENST00000581108 EZH2Q15910 746 aaKnown RBP29.9■■■□□ 2.38
CSNK1D-216ENST00000581108 TIMELESSQ9UNS1 1208 aa29.9■■■□□ 2.38
CSNK1D-216ENST00000581108 NINLQ9Y2I6 1382 aa29.9■■■□□ 2.38
CSNK1D-216ENST00000581108 CARD10Q9BWT7 1032 aa29.89■■■□□ 2.38
CSNK1D-216ENST00000581108 WNK3Q9BYP7 1800 aa29.89■■■□□ 2.38
CSNK1D-216ENST00000581108 DDB1Q16531 1140 aa29.88■■■□□ 2.37
CSNK1D-216ENST00000581108 CAMKK2Q96RR4 588 aa29.88■■■□□ 2.37
CSNK1D-216ENST00000581108 CLSPNQ9HAW4 1339 aa29.88■■■□□ 2.37
CSNK1D-216ENST00000581108 LRRC37A3O60309 1634 aa29.88■■■□□ 2.37
CSNK1D-216ENST00000581108 TMF1P82094 1093 aa29.87■■■□□ 2.37
CSNK1D-216ENST00000581108 ABCC6O95255 1503 aa29.86■■■□□ 2.37
CSNK1D-216ENST00000581108 PSDA5PKW4 1024 aaPredicted RBP29.86■■■□□ 2.37
CSNK1D-216ENST00000581108 OVOS2A0A0J9YW53 1432 aa29.85■■■□□ 2.37
CSNK1D-216ENST00000581108 OVOS2Q6IE36 1432 aa29.85■■■□□ 2.37
CSNK1D-216ENST00000581108 CDCA7Q9BWT1 371 aaPredicted RBP29.84■■■□□ 2.37
CSNK1D-216ENST00000581108 PEAK1Q9H792 1746 aa29.84■■■□□ 2.37
CSNK1D-216ENST00000581108 OVOS2A0A0G2JMS6 1433 aa29.81■■■□□ 2.36
CSNK1D-216ENST00000581108 SBF2Q86WG5 1849 aa29.81■■■□□ 2.36
CSNK1D-216ENST00000581108 C11orf95C9JLR9 678 aaPredicted RBP29.81■■■□□ 2.36
CSNK1D-216ENST00000581108 ANKRD36BQ8N2N9 1353 aa29.8■■■□□ 2.36
CSNK1D-216ENST00000581108 ERBB3P21860 1342 aa29.8■■■□□ 2.36
CSNK1D-216ENST00000581108 MARCH10Q8NA82 808 aaPredicted RBP29.8■■■□□ 2.36
CSNK1D-216ENST00000581108 CCDC7Q96M83 1385 aa29.79■■■□□ 2.36
CSNK1D-216ENST00000581108 ANKRD24Q8TF21 1146 aa29.78■■■□□ 2.36
CSNK1D-216ENST00000581108 COG3Q96JB2 828 aa29.78■■■□□ 2.36
CSNK1D-216ENST00000581108 NLRP2Q9NX02 1062 aa29.78■■■□□ 2.36
CSNK1D-216ENST00000581108 R3HDM1Q15032 1099 aaKnown RBP29.77■■■□□ 2.36
CSNK1D-216ENST00000581108 PARD3Q8TEW0 1356 aa29.77■■■□□ 2.36
CSNK1D-216ENST00000581108 EXOC5O00471 708 aa29.76■■■□□ 2.35
CSNK1D-216ENST00000581108 FBLN1P23142 703 aa29.75■■■□□ 2.35
CSNK1D-216ENST00000581108 CDCA8Q53HL2 280 aa29.75■■■□□ 2.35
CSNK1D-216ENST00000581108 IP6K1Q92551 441 aa29.74■■■□□ 2.35
CSNK1D-216ENST00000581108 RREB1Q92766 1687 aa29.74■■■□□ 2.35
CSNK1D-216ENST00000581108 PTF1AQ7RTS3 328 aa29.73■■■□□ 2.35
CSNK1D-216ENST00000581108 FYB1O15117 783 aa29.72■■■□□ 2.35
CSNK1D-216ENST00000581108 CCER1Q8TC90 406 aaPredicted RBP29.71■■■□□ 2.35
CSNK1D-216ENST00000581108 NUP188Q5SRE5 1749 aa29.71■■■□□ 2.35
CSNK1D-216ENST00000581108 MAP3K19Q56UN5 1328 aa29.71■■■□□ 2.35
CSNK1D-216ENST00000581108 LTV1Q96GA3 475 aaPredicted RBP29.7■■■□□ 2.35
CSNK1D-216ENST00000581108 BCL11BQ9C0K0 894 aaPredicted RBP29.7■■■□□ 2.35
CSNK1D-216ENST00000581108 GGNBP2Q9H3C7 697 aa29.7■■■□□ 2.35
CSNK1D-216ENST00000581108 IL2RBP14784 551 aa29.68■■■□□ 2.34
CSNK1D-216ENST00000581108 BCL9O00512 1426 aa29.68■■■□□ 2.34
CSNK1D-216ENST00000581108 TNS2Q63HR2 1409 aa29.67■■■□□ 2.34
CSNK1D-216ENST00000581108 LRP5O75197 1615 aa29.67■■■□□ 2.34
CSNK1D-216ENST00000581108 PLSCR1O15162 318 aa29.66■■■□□ 2.34
CSNK1D-216ENST00000581108 AMPHP49418 695 aa29.66■■■□□ 2.34
CSNK1D-216ENST00000581108 MYOM1P52179 1685 aa29.66■■■□□ 2.34
CSNK1D-216ENST00000581108 HOXC9P31274 260 aa29.65■■■□□ 2.34
CSNK1D-216ENST00000581108 NBPF14Q5TI25 921 aa29.64■■■□□ 2.34
CSNK1D-216ENST00000581108 CARD14Q9BXL6 1004 aa29.64■■■□□ 2.34
CSNK1D-216ENST00000581108 RRS1Q15050 365 aaKnown RBP29.63■■■□□ 2.33
CSNK1D-216ENST00000581108 KIF20BQ96Q89 1820 aa29.63■■■□□ 2.33
CSNK1D-216ENST00000581108 FAM208AQ9UK61 1670 aaKnown RBP29.62■■■□□ 2.33
CSNK1D-216ENST00000581108 RGPD3A6NKT7 1758 aaPredicted RBP29.62■■■□□ 2.33
CSNK1D-216ENST00000581108 RGPD4Q7Z3J3 1758 aa29.62■■■□□ 2.33
CSNK1D-216ENST00000581108 RGPD2P0DJD1 1756 aa29.61■■■□□ 2.33
CSNK1D-216ENST00000581108 KCNQ2O43526 872 aa29.6■■■□□ 2.33
CSNK1D-216ENST00000581108 KAT6BQ8WYB5 2073 aa29.6■■■□□ 2.33
CSNK1D-216ENST00000581108 PROM2Q8N271 834 aa29.58■■■□□ 2.33
CSNK1D-216ENST00000581108 ACSBG1Q96GR2 724 aa29.57■■■□□ 2.32
CSNK1D-216ENST00000581108 NSD3Q9BZ95 1437 aa29.56■■■□□ 2.32
CSNK1D-216ENST00000581108 RTL1A6NKG5 1358 aa29.55■■■□□ 2.32
CSNK1D-216ENST00000581108 EIF4G2P78344 907 aaKnown RBP eCLIP29.55■■■□□ 2.32
CSNK1D-216ENST00000581108 POLR3GLQ9BT43 218 aa29.55■■■□□ 2.32
CSNK1D-216ENST00000581108 NHSQ6T4R5 1651 aa29.53■■■□□ 2.32
CSNK1D-216ENST00000581108 HSPA5P11021 654 aaKnown RBP29.53■■■□□ 2.32
CSNK1D-216ENST00000581108 DDX54Q8TDD1 881 aaKnown RBP29.52■■■□□ 2.32
CSNK1D-216ENST00000581108 NBPF6Q5VWK0 638 aa29.51■■■□□ 2.31
CSNK1D-216ENST00000581108 NBPF4Q96M43 638 aa29.51■■■□□ 2.31
CSNK1D-216ENST00000581108 TXNRD1Q16881 649 aa29.5■■■□□ 2.31
CSNK1D-216ENST00000581108 HSP90AB2PQ58FF8 381 aa29.5■■■□□ 2.31
CSNK1D-216ENST00000581108 ANO8Q9HCE9 1232 aaPredicted RBP29.5■■■□□ 2.31
CSNK1D-216ENST00000581108 USHBP1Q8N6Y0 703 aa29.47■■■□□ 2.31
CSNK1D-216ENST00000581108 INSRP06213 1382 aa29.47■■■□□ 2.31
CSNK1D-216ENST00000581108 BTAF1O14981 1849 aa29.47■■■□□ 2.31
CSNK1D-216ENST00000581108 MEGF6O75095 1541 aa29.45■■■□□ 2.31
CSNK1D-216ENST00000581108 FLT4P35916 1363 aa29.45■■■□□ 2.31
CSNK1D-216ENST00000581108 ZCRB1Q8TBF4 217 aaKnown RBP29.45■■■□□ 2.31
CSNK1D-216ENST00000581108 EMILIN1Q9Y6C2 1016 aa29.45■■■□□ 2.31
CSNK1D-216ENST00000581108 SMG6Q86US8 1419 aaKnown RBP29.45■■■□□ 2.3
CSNK1D-216ENST00000581108 CGNL1Q0VF96 1302 aa29.45■■■□□ 2.3
CSNK1D-216ENST00000581108 KIF24Q5T7B8 1368 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms