RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 BRD4O60885 1362 aaPredicted RBP21.48■■□□□ 1.03
IFT20-211ENST00000580991 ZBTB7CA1YPR0 619 aa21.48■■□□□ 1.03
IFT20-211ENST00000580991 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
IFT20-211ENST00000580991 STK32BQ9NY57 414 aa21.48■■□□□ 1.03
IFT20-211ENST00000580991 CDCA7Q9BWT1 371 aaPredicted RBP21.47■■□□□ 1.03
IFT20-211ENST00000580991 PPIP5K1Q6PFW1 1433 aa21.46■■□□□ 1.03
IFT20-211ENST00000580991 C1QTNF8P60827 252 aa21.46■■□□□ 1.03
IFT20-211ENST00000580991 SLC15A2Q16348 729 aa21.46■■□□□ 1.03
IFT20-211ENST00000580991 TXNRD1Q16881 649 aa21.46■■□□□ 1.03
IFT20-211ENST00000580991 MARCH10Q8NA82 808 aaPredicted RBP21.46■■□□□ 1.03
IFT20-211ENST00000580991 NLRP6P59044 892 aa21.45■■□□□ 1.02
IFT20-211ENST00000580991 MTFR1LQ9H019 292 aa21.45■■□□□ 1.02
IFT20-211ENST00000580991 AKAP12Q02952 1782 aa21.45■■□□□ 1.02
IFT20-211ENST00000580991 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.02
IFT20-211ENST00000580991 SRPK2P78362 688 aaKnown RBP21.44■■□□□ 1.02
IFT20-211ENST00000580991 WDR17Q8IZU2 1322 aa21.44■■□□□ 1.02
IFT20-211ENST00000580991 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
IFT20-211ENST00000580991 SLIT3O75094 1523 aa21.42■■□□□ 1.02
IFT20-211ENST00000580991 SGIP1Q9BQI5 828 aa21.42■■□□□ 1.02
IFT20-211ENST00000580991 COL18A1P39060 1754 aa21.41■■□□□ 1.02
IFT20-211ENST00000580991 AXIN2Q9Y2T1 843 aa21.4■■□□□ 1.02
IFT20-211ENST00000580991 USP6P35125 1406 aa21.39■■□□□ 1.02
IFT20-211ENST00000580991 CABP2Q9NPB3 220 aa21.39■■□□□ 1.01
IFT20-211ENST00000580991 KIAA1210Q9ULL0 1709 aa21.38■■□□□ 1.01
IFT20-211ENST00000580991 ARXQ96QS3 562 aa21.38■■□□□ 1.01
IFT20-211ENST00000580991 EXOC5O00471 708 aa21.37■■□□□ 1.01
IFT20-211ENST00000580991 CARD10Q9BWT7 1032 aa21.37■■□□□ 1.01
IFT20-211ENST00000580991 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
IFT20-211ENST00000580991 IFFO2Q5TF58 517 aa21.36■■□□□ 1.01
IFT20-211ENST00000580991 CABP1Q9NZU7 370 aa21.36■■□□□ 1.01
IFT20-211ENST00000580991 CPSF1Q10570 1443 aaKnown RBP21.36■■□□□ 1.01
IFT20-211ENST00000580991 CSB-PGBD3P0DP91 1061 aa21.35■■□□□ 1.01
IFT20-211ENST00000580991 CENPJQ9HC77 1338 aaPredicted RBP21.34■■□□□ 1.01
IFT20-211ENST00000580991 ARHGEF25Q86VW2 580 aa21.34■■□□□ 1.01
IFT20-211ENST00000580991 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
IFT20-211ENST00000580991 NBPF1Q3BBV0 1214 aa21.33■■□□□ 1.01
IFT20-211ENST00000580991 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
IFT20-211ENST00000580991 CEP350Q5VT06 3117 aa21.33■■□□□ 1
IFT20-211ENST00000580991 RGPD5Q99666 1765 aa21.32■■□□□ 1
IFT20-211ENST00000580991 GPR162Q16538 588 aa21.31■■□□□ 1
IFT20-211ENST00000580991 CCDC7Q96M83 1385 aa21.31■■□□□ 1
IFT20-211ENST00000580991 NHSQ6T4R5 1651 aa21.31■■□□□ 1
IFT20-211ENST00000580991 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
IFT20-211ENST00000580991 TNS2Q63HR2 1409 aa21.3■■□□□ 1
IFT20-211ENST00000580991 GOLGB1Q14789 3259 aaKnown RBP21.3■■□□□ 1
IFT20-211ENST00000580991 GIGYF1O75420 1035 aaPredicted RBP21.3■■□□□ 1
IFT20-211ENST00000580991 PAPPAQ13219 1627 aa21.29■■□□□ 1
IFT20-211ENST00000580991 TRPM1Q7Z4N2 1603 aa21.29■■□□□ 1
IFT20-211ENST00000580991 ACSBG1Q96GR2 724 aa21.27■■□□□ 1
IFT20-211ENST00000580991 KAT6BQ8WYB5 2073 aa21.26■□□□□ 0.99
IFT20-211ENST00000580991 SOX12O15370 315 aa21.26■□□□□ 0.99
IFT20-211ENST00000580991 ZNF692Q9BU19 519 aaPredicted RBP21.26■□□□□ 0.99
IFT20-211ENST00000580991 TTC21BQ7Z4L5 1316 aa21.25■□□□□ 0.99
IFT20-211ENST00000580991 ABCC6O95255 1503 aa21.24■□□□□ 0.99
IFT20-211ENST00000580991 ZNF827Q17R98 1081 aa21.24■□□□□ 0.99
IFT20-211ENST00000580991 SLC16A10Q8TF71 515 aa21.24■□□□□ 0.99
IFT20-211ENST00000580991 TTC21AQ8NDW8 1320 aa21.23■□□□□ 0.99
IFT20-211ENST00000580991 BTAF1O14981 1849 aa21.22■□□□□ 0.99
IFT20-211ENST00000580991 POLD1P28340 1107 aa21.22■□□□□ 0.99
IFT20-211ENST00000580991 KLHL34Q8N239 644 aa21.22■□□□□ 0.99
IFT20-211ENST00000580991 NFAT5O94916 1531 aa21.22■□□□□ 0.99
IFT20-211ENST00000580991 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
IFT20-211ENST00000580991 LRRC4BQ9NT99 713 aa21.21■□□□□ 0.99
IFT20-211ENST00000580991 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
IFT20-211ENST00000580991 IL2RBP14784 551 aa21.19■□□□□ 0.98
IFT20-211ENST00000580991 AKT1S1Q96B36 256 aa21.18■□□□□ 0.98
IFT20-211ENST00000580991 NLRP2Q9NX02 1062 aa21.18■□□□□ 0.98
IFT20-211ENST00000580991 ERBB3P21860 1342 aa21.18■□□□□ 0.98
IFT20-211ENST00000580991 QSER1Q2KHR3 1735 aa21.18■□□□□ 0.98
IFT20-211ENST00000580991 SLC27A3Q5K4L6 730 aa21.17■□□□□ 0.98
IFT20-211ENST00000580991 COL24A1Q17RW2 1714 aa21.17■□□□□ 0.98
IFT20-211ENST00000580991 SHANK3Q9BYB0 1731 aa21.17■□□□□ 0.98
IFT20-211ENST00000580991 KTN1Q86UP2 1357 aaKnown RBP21.14■□□□□ 0.98
IFT20-211ENST00000580991 PNPLA7Q6ZV29 1317 aa21.14■□□□□ 0.97
IFT20-211ENST00000580991 GRIN3BO60391 1043 aa21.14■□□□□ 0.97
IFT20-211ENST00000580991 NLGN2Q8NFZ4 835 aa21.13■□□□□ 0.97
IFT20-211ENST00000580991 TFCP2L1Q9NZI6 479 aa21.13■□□□□ 0.97
IFT20-211ENST00000580991 USP31Q70CQ4 1352 aa21.1■□□□□ 0.97
IFT20-211ENST00000580991 ANKRD24Q8TF21 1146 aa21.09■□□□□ 0.97
IFT20-211ENST00000580991 LTN1O94822 1766 aa21.09■□□□□ 0.97
IFT20-211ENST00000580991 TUBGCP6Q96RT7 1819 aa21.08■□□□□ 0.97
IFT20-211ENST00000580991 YBX3P16989 372 aaKnown RBP eCLIP21.08■□□□□ 0.97
IFT20-211ENST00000580991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.08■□□□□ 0.97
IFT20-211ENST00000580991 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
IFT20-211ENST00000580991 USP54Q70EL1 1684 aa21.06■□□□□ 0.96
IFT20-211ENST00000580991 DDX54Q8TDD1 881 aaKnown RBP21.06■□□□□ 0.96
IFT20-211ENST00000580991 KCNQ4P56696 695 aa21.05■□□□□ 0.96
IFT20-211ENST00000580991 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
IFT20-211ENST00000580991 SYTL4Q96C24 671 aaPredicted RBP21.04■□□□□ 0.96
IFT20-211ENST00000580991 PRIM1P49642 420 aaKnown RBP21.03■□□□□ 0.96
IFT20-211ENST00000580991 NME9Q86XW9 330 aa21.03■□□□□ 0.96
IFT20-211ENST00000580991 GPBP1L1Q9HC44 474 aaPredicted RBP21.03■□□□□ 0.96
IFT20-211ENST00000580991 ANKRD36BQ8N2N9 1353 aa21.02■□□□□ 0.96
IFT20-211ENST00000580991 LY75O60449 1722 aa21.02■□□□□ 0.96
IFT20-211ENST00000580991 MSH5O43196 834 aa21.01■□□□□ 0.95
IFT20-211ENST00000580991 SBNO2Q9Y2G9 1366 aa21■□□□□ 0.95
IFT20-211ENST00000580991 HSPA6P17066 643 aa21■□□□□ 0.95
IFT20-211ENST00000580991 L3MBTL2Q969R5 705 aa21■□□□□ 0.95
IFT20-211ENST00000580991 CCNL1Q9UK58 526 aaPredicted RBP21■□□□□ 0.95
IFT20-211ENST00000580991 ROCK2O75116 1388 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms