RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 POLKQ9UBT6 870 aa10.69□□□□□ -0.7
KPNB1-210ENST00000580573 SBNO1A3KN83 1393 aa10.68□□□□□ -0.7
KPNB1-210ENST00000580573 ESCO1Q5FWF5 840 aa10.68□□□□□ -0.7
KPNB1-210ENST00000580573 ZRANB1Q9UGI0 708 aa10.68□□□□□ -0.7
KPNB1-210ENST00000580573 ABCC6O95255 1503 aa10.68□□□□□ -0.7
KPNB1-210ENST00000580573 USP19O94966 1318 aa10.67□□□□□ -0.7
KPNB1-210ENST00000580573 AHDC1Q5TGY3 1603 aaPredicted RBP10.67□□□□□ -0.7
KPNB1-210ENST00000580573 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
KPNB1-210ENST00000580573 CAMTA1Q9Y6Y1 1673 aa10.66□□□□□ -0.7
KPNB1-210ENST00000580573 HNRNPUQ00839 825 aaKnown RBP eCLIP10.66□□□□□ -0.7
KPNB1-210ENST00000580573 CFAP53Q96M91 514 aa10.66□□□□□ -0.7
KPNB1-210ENST00000580573 ADAMTS8Q9UP79 889 aa10.66□□□□□ -0.7
KPNB1-210ENST00000580573 COL18A1P39060 1754 aa10.66□□□□□ -0.7
KPNB1-210ENST00000580573 ROBO1Q9Y6N7 1651 aa10.66□□□□□ -0.7
KPNB1-210ENST00000580573 RTL1A6NKG5 1358 aa10.65□□□□□ -0.7
KPNB1-210ENST00000580573 TNNT2P45379 298 aaPredicted RBP10.65□□□□□ -0.7
KPNB1-210ENST00000580573 TNS3Q68CZ2 1445 aa10.65□□□□□ -0.7
KPNB1-210ENST00000580573 COL22A1Q8NFW1 1626 aaPredicted RBP10.65□□□□□ -0.7
KPNB1-210ENST00000580573 NPHP3Q7Z494 1330 aa10.64□□□□□ -0.71
KPNB1-210ENST00000580573 PRR29P0C7W0 189 aa10.64□□□□□ -0.71
KPNB1-210ENST00000580573 BRINP3Q76B58 766 aa10.64□□□□□ -0.71
KPNB1-210ENST00000580573 DLG5Q8TDM6 1919 aa10.64□□□□□ -0.71
KPNB1-210ENST00000580573 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
KPNB1-210ENST00000580573 FAM208AQ9UK61 1670 aaKnown RBP10.63□□□□□ -0.71
KPNB1-210ENST00000580573 SOS2Q07890 1332 aaPredicted RBP10.63□□□□□ -0.71
KPNB1-210ENST00000580573 FOXO3O43524 673 aa10.63□□□□□ -0.71
KPNB1-210ENST00000580573 WDR43Q15061 677 aaKnown RBP eCLIP10.63□□□□□ -0.71
KPNB1-210ENST00000580573 EMILIN1Q9Y6C2 1016 aa10.63□□□□□ -0.71
KPNB1-210ENST00000580573 FLT4P35916 1363 aa10.63□□□□□ -0.71
KPNB1-210ENST00000580573 RGPD5Q99666 1765 aa10.62□□□□□ -0.71
KPNB1-210ENST00000580573 ZNF521Q96K83 1311 aa10.62□□□□□ -0.71
KPNB1-210ENST00000580573 PSME1Q06323 249 aa10.62□□□□□ -0.71
KPNB1-210ENST00000580573 KRT28Q7Z3Y7 464 aa10.62□□□□□ -0.71
KPNB1-210ENST00000580573 NGEFQ8N5V2 710 aa10.62□□□□□ -0.71
KPNB1-210ENST00000580573 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
KPNB1-210ENST00000580573 SLAIN2Q9P270 581 aa10.62□□□□□ -0.71
KPNB1-210ENST00000580573 MAP3K19Q56UN5 1328 aa10.61□□□□□ -0.71
KPNB1-210ENST00000580573 NCAPD2Q15021 1401 aa10.61□□□□□ -0.71
KPNB1-210ENST00000580573 DIAPH1O60610 1272 aaKnown RBP10.61□□□□□ -0.71
KPNB1-210ENST00000580573 ECM2O94769 699 aaPredicted RBP10.61□□□□□ -0.71
KPNB1-210ENST00000580573 FBLN1P23142 703 aa10.61□□□□□ -0.71
KPNB1-210ENST00000580573 IL13P35225 146 aa10.61□□□□□ -0.71
KPNB1-210ENST00000580573 NLRP6P59044 892 aa10.61□□□□□ -0.71
KPNB1-210ENST00000580573 RGPD2P0DJD1 1756 aa10.61□□□□□ -0.71
KPNB1-210ENST00000580573 ARHGEF10O15013 1369 aa10.61□□□□□ -0.71
KPNB1-210ENST00000580573 COL16A1Q07092 1604 aaPredicted RBP10.61□□□□□ -0.71
KPNB1-210ENST00000580573 SPATA31A3Q5VYP0 1347 aa10.6□□□□□ -0.71
KPNB1-210ENST00000580573 RRS1Q15050 365 aaKnown RBP10.6□□□□□ -0.71
KPNB1-210ENST00000580573 KDRP35968 1356 aa10.6□□□□□ -0.71
KPNB1-210ENST00000580573 KCNH5Q8NCM2 988 aa10.59□□□□□ -0.71
KPNB1-210ENST00000580573 PLEKHF1Q96S99 279 aa10.59□□□□□ -0.71
KPNB1-210ENST00000580573 NUDCQ9Y266 331 aa10.59□□□□□ -0.71
KPNB1-210ENST00000580573 CPDO75976 1380 aa10.58□□□□□ -0.72
KPNB1-210ENST00000580573 PDE3BQ13370 1112 aa10.58□□□□□ -0.72
KPNB1-210ENST00000580573 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
KPNB1-210ENST00000580573 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
KPNB1-210ENST00000580573 FCHSD2O94868 740 aa10.57□□□□□ -0.72
KPNB1-210ENST00000580573 EIF4A2Q14240 407 aaKnown RBP10.57□□□□□ -0.72
KPNB1-210ENST00000580573 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
KPNB1-210ENST00000580573 RSPH6AQ9H0K4 717 aa10.57□□□□□ -0.72
KPNB1-210ENST00000580573 PHLPP1O60346 1717 aa10.57□□□□□ -0.72
KPNB1-210ENST00000580573 IGSF1Q8N6C5 1336 aa10.57□□□□□ -0.72
KPNB1-210ENST00000580573 PITPNM1O00562 1244 aa10.56□□□□□ -0.72
KPNB1-210ENST00000580573 GCP02774 474 aa10.56□□□□□ -0.72
KPNB1-210ENST00000580573 HOXC9P31274 260 aa10.56□□□□□ -0.72
KPNB1-210ENST00000580573 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
KPNB1-210ENST00000580573 HSP90AB2PQ58FF8 381 aa10.56□□□□□ -0.72
KPNB1-210ENST00000580573 ARHGEF25Q86VW2 580 aa10.56□□□□□ -0.72
KPNB1-210ENST00000580573 CREBZFQ9NS37 354 aa10.56□□□□□ -0.72
KPNB1-210ENST00000580573 CIZ1Q9ULV3 898 aaPredicted RBP10.56□□□□□ -0.72
KPNB1-210ENST00000580573 VIRMAQ69YN4 1812 aaKnown RBP10.56□□□□□ -0.72
KPNB1-210ENST00000580573 LRRC37A3O60309 1634 aa10.55□□□□□ -0.72
KPNB1-210ENST00000580573 PLEKHG2Q9H7P9 1386 aa10.55□□□□□ -0.72
KPNB1-210ENST00000580573 APAF1O14727 1248 aa10.55□□□□□ -0.72
KPNB1-210ENST00000580573 U2AF1L5P0DN76 240 aaPredicted RBP10.55□□□□□ -0.72
KPNB1-210ENST00000580573 U2AF1Q01081 240 aaKnown RBP eCLIP10.55□□□□□ -0.72
KPNB1-210ENST00000580573 NUTM2GQ5VZR2 741 aa10.55□□□□□ -0.72
KPNB1-210ENST00000580573 IP6K1Q92551 441 aa10.55□□□□□ -0.72
KPNB1-210ENST00000580573 DDX17Q92841 729 aaKnown RBP10.55□□□□□ -0.72
KPNB1-210ENST00000580573 CCDC146Q8IYE0 955 aa10.54□□□□□ -0.72
KPNB1-210ENST00000580573 PNNQ9H307 717 aaKnown RBP10.54□□□□□ -0.72
KPNB1-210ENST00000580573 PPM1GO15355 546 aaPredicted RBP10.53□□□□□ -0.72
KPNB1-210ENST00000580573 TRMT2AQ8IZ69 625 aaKnown RBP10.53□□□□□ -0.72
KPNB1-210ENST00000580573 TCP11L2Q8N4U5 519 aa10.53□□□□□ -0.72
KPNB1-210ENST00000580573 ADAMTS7Q9UKP4 1686 aa10.53□□□□□ -0.72
KPNB1-210ENST00000580573 PKD1L3Q7Z443 1732 aa10.53□□□□□ -0.72
KPNB1-210ENST00000580573 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.72
KPNB1-210ENST00000580573 U2SURPO15042 1029 aaKnown RBP10.52□□□□□ -0.73
KPNB1-210ENST00000580573 AMPHP49418 695 aa10.52□□□□□ -0.73
KPNB1-210ENST00000580573 GSE1Q14687 1217 aa10.52□□□□□ -0.73
KPNB1-210ENST00000580573 PRKAR2BP31323 418 aa10.51□□□□□ -0.73
KPNB1-210ENST00000580573 WWC1Q8IX03 1113 aa10.51□□□□□ -0.73
KPNB1-210ENST00000580573 WNK3Q9BYP7 1800 aa10.51□□□□□ -0.73
KPNB1-210ENST00000580573 PLCH1Q4KWH8 1693 aa10.5□□□□□ -0.73
KPNB1-210ENST00000580573 NRAPQ86VF7 1730 aa10.5□□□□□ -0.73
KPNB1-210ENST00000580573 TMPOP42166 694 aaKnown RBP10.5□□□□□ -0.73
KPNB1-210ENST00000580573 NUBP1P53384 320 aa10.5□□□□□ -0.73
KPNB1-210ENST00000580573 EYA1Q99502 592 aa10.5□□□□□ -0.73
KPNB1-210ENST00000580573 ERBB3P21860 1342 aa10.5□□□□□ -0.73
KPNB1-210ENST00000580573 RNF123Q5XPI4 1314 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms