RNA–Protein interactions for RNA: ENST00000580396.1

CPD-204, Transcript of carboxypeptidase D, humanhuman

TSL 5

Gene CPD, Length 2,733 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-204ENST00000580396 BCL2L13Q9BXK5 485 aa11.66□□□□□ -0.54
CPD-204ENST00000580396 DZIP1LQ8IYY4 767 aaKnown RBP11.66□□□□□ -0.54
CPD-204ENST00000580396 IL16Q14005 1332 aa11.66□□□□□ -0.54
CPD-204ENST00000580396 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
CPD-204ENST00000580396 PIAS4Q8N2W9 510 aaPredicted RBP11.66□□□□□ -0.54
CPD-204ENST00000580396 ARHGAP31Q2M1Z3 1444 aa11.65□□□□□ -0.54
CPD-204ENST00000580396 HDAC1Q13547 482 aaPredicted RBP11.65□□□□□ -0.54
CPD-204ENST00000580396 AHDC1Q5TGY3 1603 aaPredicted RBP11.65□□□□□ -0.54
CPD-204ENST00000580396 FTSJ3Q8IY81 847 aaKnown RBP11.65□□□□□ -0.55
CPD-204ENST00000580396 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.55
CPD-204ENST00000580396 GGT6Q6P531 493 aa11.64□□□□□ -0.55
CPD-204ENST00000580396 UPF1Q92900 1129 aaKnown RBP eCLIP11.64□□□□□ -0.55
CPD-204ENST00000580396 TBC1D2Q9BYX2 928 aa11.64□□□□□ -0.55
CPD-204ENST00000580396 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
CPD-204ENST00000580396 DDX19BQ9UMR2 479 aa11.63□□□□□ -0.55
CPD-204ENST00000580396 TMPOP42166 694 aaKnown RBP11.63□□□□□ -0.55
CPD-204ENST00000580396 SLKQ9H2G2 1235 aaPredicted RBP11.63□□□□□ -0.55
CPD-204ENST00000580396 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
CPD-204ENST00000580396 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
CPD-204ENST00000580396 HSPA1LP34931 641 aa11.62□□□□□ -0.55
CPD-204ENST00000580396 SMC4Q9NTJ3 1288 aa11.62□□□□□ -0.55
CPD-204ENST00000580396 CDC42BPGQ6DT37 1551 aa11.62□□□□□ -0.55
CPD-204ENST00000580396 ATAD2Q6PL18 1390 aa11.62□□□□□ -0.55
CPD-204ENST00000580396 POGKQ9P215 609 aa11.62□□□□□ -0.55
CPD-204ENST00000580396 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
CPD-204ENST00000580396 KIF20BQ96Q89 1820 aa11.62□□□□□ -0.55
CPD-204ENST00000580396 MYO5BQ9ULV0 1848 aa11.62□□□□□ -0.55
CPD-204ENST00000580396 TRIM27P14373 513 aa11.61□□□□□ -0.55
CPD-204ENST00000580396 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
CPD-204ENST00000580396 FAM43AQ8N2R8 423 aa11.61□□□□□ -0.55
CPD-204ENST00000580396 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
CPD-204ENST00000580396 L1TD1Q5T7N2 865 aaKnown RBP11.61□□□□□ -0.55
CPD-204ENST00000580396 ATF7IPQ6VMQ6 1270 aa11.61□□□□□ -0.55
CPD-204ENST00000580396 SMC5Q8IY18 1101 aa11.61□□□□□ -0.55
CPD-204ENST00000580396 RGS22Q8NE09 1264 aa11.61□□□□□ -0.55
CPD-204ENST00000580396 TSR2Q969E8 191 aaKnown RBP11.61□□□□□ -0.55
CPD-204ENST00000580396 SPATA31A6Q5VVP1 1343 aa11.61□□□□□ -0.55
CPD-204ENST00000580396 AEBP1Q8IUX7 1158 aa11.6□□□□□ -0.55
CPD-204ENST00000580396 RGS17Q9UGC6 210 aaPredicted RBP11.6□□□□□ -0.55
CPD-204ENST00000580396 CD163L1Q9NR16 1453 aa11.6□□□□□ -0.55
CPD-204ENST00000580396 SSH1Q8WYL5 1049 aa11.6□□□□□ -0.55
CPD-204ENST00000580396 TMEM131LA2VDJ0 1609 aa11.6□□□□□ -0.55
CPD-204ENST00000580396 PNPLA6Q8IY17 1366 aa11.6□□□□□ -0.55
CPD-204ENST00000580396 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
CPD-204ENST00000580396 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
CPD-204ENST00000580396 PNNQ9H307 717 aaKnown RBP11.59□□□□□ -0.55
CPD-204ENST00000580396 KIF16BQ96L93 1317 aa11.59□□□□□ -0.55
CPD-204ENST00000580396 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
CPD-204ENST00000580396 TERF2IPQ9NYB0 399 aa11.59□□□□□ -0.55
CPD-204ENST00000580396 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
CPD-204ENST00000580396 IPO8O15397 1037 aaKnown RBP11.58□□□□□ -0.56
CPD-204ENST00000580396 ITPRIPQ8IWB1 547 aa11.58□□□□□ -0.56
CPD-204ENST00000580396 ZBTB40Q9NUA8 1239 aa11.58□□□□□ -0.56
CPD-204ENST00000580396 SLC52A1Q9NWF4 448 aa11.58□□□□□ -0.56
CPD-204ENST00000580396 RAPGEF3O95398 923 aa11.58□□□□□ -0.56
CPD-204ENST00000580396 ALDH1L2Q3SY69 923 aa11.58□□□□□ -0.56
CPD-204ENST00000580396 XIRP1Q702N8 1843 aaKnown RBP11.57□□□□□ -0.56
CPD-204ENST00000580396 PPIP5K1Q6PFW1 1433 aa11.57□□□□□ -0.56
CPD-204ENST00000580396 FYB1O15117 783 aa11.57□□□□□ -0.56
CPD-204ENST00000580396 SLC34A2O95436 690 aa11.57□□□□□ -0.56
CPD-204ENST00000580396 GGNBP2Q9H3C7 697 aa11.57□□□□□ -0.56
CPD-204ENST00000580396 CHMP5Q9NZZ3 219 aa11.57□□□□□ -0.56
CPD-204ENST00000580396 NOB1Q9ULX3 412 aaKnown RBP11.57□□□□□ -0.56
CPD-204ENST00000580396 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
CPD-204ENST00000580396 MCM4P33991 863 aa11.56□□□□□ -0.56
CPD-204ENST00000580396 HSPA2P54652 639 aa11.56□□□□□ -0.56
CPD-204ENST00000580396 IDI1Q13907 227 aa11.56□□□□□ -0.56
CPD-204ENST00000580396 NUTM2DQ5VT03 806 aaPredicted RBP11.56□□□□□ -0.56
CPD-204ENST00000580396 YTHDC2Q9H6S0 1430 aaKnown RBP11.56□□□□□ -0.56
CPD-204ENST00000580396 DIAPH1O60610 1272 aaKnown RBP11.56□□□□□ -0.56
CPD-204ENST00000580396 RIPK4P57078 832 aa11.56□□□□□ -0.56
CPD-204ENST00000580396 TMEM57Q8N5G2 664 aa11.56□□□□□ -0.56
CPD-204ENST00000580396 MFAP1P55081 439 aaKnown RBP11.55□□□□□ -0.56
CPD-204ENST00000580396 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
CPD-204ENST00000580396 NUCB1Q02818 461 aa11.55□□□□□ -0.56
CPD-204ENST00000580396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
CPD-204ENST00000580396 FCHSD2O94868 740 aa11.54□□□□□ -0.56
CPD-204ENST00000580396 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.54□□□□□ -0.56
CPD-204ENST00000580396 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
CPD-204ENST00000580396 SAFB2Q14151 953 aaKnown RBP eCLIP11.54□□□□□ -0.56
CPD-204ENST00000580396 HDGFL2Q7Z4V5 671 aaPredicted RBP11.53□□□□□ -0.56
CPD-204ENST00000580396 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
CPD-204ENST00000580396 SNX21Q969T3 373 aa11.53□□□□□ -0.56
CPD-204ENST00000580396 STK26Q9P289 416 aa11.53□□□□□ -0.56
CPD-204ENST00000580396 PIK3R4Q99570 1358 aa11.53□□□□□ -0.56
CPD-204ENST00000580396 CHMP4BQ9H444 224 aaKnown RBP11.52□□□□□ -0.56
CPD-204ENST00000580396 ATP7BP35670 1465 aa11.52□□□□□ -0.56
CPD-204ENST00000580396 PTCH1Q13635 1447 aa11.52□□□□□ -0.57
CPD-204ENST00000580396 DLC1Q96QB1 1528 aa11.52□□□□□ -0.57
CPD-204ENST00000580396 COL16A1Q07092 1604 aaPredicted RBP11.52□□□□□ -0.57
CPD-204ENST00000580396 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
CPD-204ENST00000580396 PRAM1Q96QH2 718 aa11.52□□□□□ -0.57
CPD-204ENST00000580396 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
CPD-204ENST00000580396 MAP2P11137 1827 aaKnown RBP11.52□□□□□ -0.57
CPD-204ENST00000580396 JCADQ9P266 1359 aa11.52□□□□□ -0.57
CPD-204ENST00000580396 MINK1Q8N4C8 1332 aaPredicted RBP11.52□□□□□ -0.57
CPD-204ENST00000580396 DDIT3P35638 169 aa11.51□□□□□ -0.57
CPD-204ENST00000580396 GOLGA6L3A6NEY3 463 aa11.51□□□□□ -0.57
CPD-204ENST00000580396 BMP2KLQ5H9B9 411 aa11.51□□□□□ -0.57
CPD-204ENST00000580396 CHD1LQ86WJ1 897 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms