RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 RGPD3A6NKT7 1758 aaPredicted RBP13.41□□□□□ -0.26
SNX11-206ENST00000580219 RGPD4Q7Z3J3 1758 aa13.41□□□□□ -0.26
SNX11-206ENST00000580219 GPBP1L1Q9HC44 474 aaPredicted RBP13.41□□□□□ -0.26
SNX11-206ENST00000580219 ANO8Q9HCE9 1232 aaPredicted RBP13.41□□□□□ -0.26
SNX11-206ENST00000580219 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
SNX11-206ENST00000580219 APLP1P51693 650 aa13.4□□□□□ -0.26
SNX11-206ENST00000580219 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
SNX11-206ENST00000580219 WDR90Q96KV7 1748 aa13.39□□□□□ -0.27
SNX11-206ENST00000580219 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
SNX11-206ENST00000580219 LRPPRCP42704 1394 aaKnown RBP13.38□□□□□ -0.27
SNX11-206ENST00000580219 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
SNX11-206ENST00000580219 CABLES1Q8TDN4 633 aa13.38□□□□□ -0.27
SNX11-206ENST00000580219 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
SNX11-206ENST00000580219 WWC3Q9ULE0 1092 aa13.38□□□□□ -0.27
SNX11-206ENST00000580219 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
SNX11-206ENST00000580219 MAP3K5Q99683 1374 aa13.37□□□□□ -0.27
SNX11-206ENST00000580219 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.27
SNX11-206ENST00000580219 RALBP1Q15311 655 aa13.36□□□□□ -0.27
SNX11-206ENST00000580219 TMEM132EQ6IEE7 984 aa13.36□□□□□ -0.27
SNX11-206ENST00000580219 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
SNX11-206ENST00000580219 BTG4Q9NY30 223 aa13.36□□□□□ -0.27
SNX11-206ENST00000580219 SPATA31A5Q5VU36 1347 aa13.36□□□□□ -0.27
SNX11-206ENST00000580219 SPATA31A7Q8IWB4 1347 aa13.36□□□□□ -0.27
SNX11-206ENST00000580219 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
SNX11-206ENST00000580219 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
SNX11-206ENST00000580219 YTHDC2Q9H6S0 1430 aaKnown RBP13.35□□□□□ -0.27
SNX11-206ENST00000580219 CDC42BPGQ6DT37 1551 aa13.34□□□□□ -0.27
SNX11-206ENST00000580219 ZNF526Q8TF50 670 aaPredicted RBP13.34□□□□□ -0.27
SNX11-206ENST00000580219 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
SNX11-206ENST00000580219 FKBP8Q14318 412 aa13.33□□□□□ -0.28
SNX11-206ENST00000580219 ARXQ96QS3 562 aa13.33□□□□□ -0.28
SNX11-206ENST00000580219 CENPJQ9HC77 1338 aaPredicted RBP13.33□□□□□ -0.28
SNX11-206ENST00000580219 ARHGEF28Q8N1W1 1705 aaKnown RBP13.33□□□□□ -0.28
SNX11-206ENST00000580219 TECPR2O15040 1411 aa13.32□□□□□ -0.28
SNX11-206ENST00000580219 TNS3Q68CZ2 1445 aa13.32□□□□□ -0.28
SNX11-206ENST00000580219 KIF1AQ12756 1690 aa13.32□□□□□ -0.28
SNX11-206ENST00000580219 PER1O15534 1290 aaPredicted RBP13.32□□□□□ -0.28
SNX11-206ENST00000580219 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
SNX11-206ENST00000580219 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
SNX11-206ENST00000580219 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
SNX11-206ENST00000580219 PROM2Q8N271 834 aa13.31□□□□□ -0.28
SNX11-206ENST00000580219 MTFR1LQ9H019 292 aa13.31□□□□□ -0.28
SNX11-206ENST00000580219 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
SNX11-206ENST00000580219 STK26Q9P289 416 aa13.31□□□□□ -0.28
SNX11-206ENST00000580219 AATKQ6ZMQ8 1374 aa13.31□□□□□ -0.28
SNX11-206ENST00000580219 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
SNX11-206ENST00000580219 TRAK1Q9UPV9 953 aa13.3□□□□□ -0.28
SNX11-206ENST00000580219 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
SNX11-206ENST00000580219 BRD4O60885 1362 aaPredicted RBP13.3□□□□□ -0.28
SNX11-206ENST00000580219 SBF2Q86WG5 1849 aa13.29□□□□□ -0.28
SNX11-206ENST00000580219 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
SNX11-206ENST00000580219 BCL11BQ9C0K0 894 aaPredicted RBP13.29□□□□□ -0.28
SNX11-206ENST00000580219 NPC1L1Q9UHC9 1359 aa13.29□□□□□ -0.28
SNX11-206ENST00000580219 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
SNX11-206ENST00000580219 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
SNX11-206ENST00000580219 KLRG1Q96E93 195 aa13.28□□□□□ -0.28
SNX11-206ENST00000580219 PANK3Q9H999 370 aa13.28□□□□□ -0.28
SNX11-206ENST00000580219 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
SNX11-206ENST00000580219 NUTM2FA1L443 756 aa13.26□□□□□ -0.29
SNX11-206ENST00000580219 ADCY9O60503 1353 aa13.26□□□□□ -0.29
SNX11-206ENST00000580219 PDE3BQ13370 1112 aa13.26□□□□□ -0.29
SNX11-206ENST00000580219 KRT28Q7Z3Y7 464 aa13.26□□□□□ -0.29
SNX11-206ENST00000580219 GTF3C3Q9Y5Q9 886 aa13.26□□□□□ -0.29
SNX11-206ENST00000580219 PLEKHH1Q9ULM0 1364 aa13.25□□□□□ -0.29
SNX11-206ENST00000580219 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
SNX11-206ENST00000580219 CCDC184Q52MB2 194 aa13.25□□□□□ -0.29
SNX11-206ENST00000580219 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
SNX11-206ENST00000580219 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
SNX11-206ENST00000580219 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
SNX11-206ENST00000580219 KIF3CO14782 793 aa13.24□□□□□ -0.29
SNX11-206ENST00000580219 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
SNX11-206ENST00000580219 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
SNX11-206ENST00000580219 RGPD8O14715 1765 aaPredicted RBP13.24□□□□□ -0.29
SNX11-206ENST00000580219 INSRP06213 1382 aa13.23□□□□□ -0.29
SNX11-206ENST00000580219 PLSCR1O15162 318 aa13.23□□□□□ -0.29
SNX11-206ENST00000580219 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
SNX11-206ENST00000580219 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
SNX11-206ENST00000580219 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNX11-206ENST00000580219 TMC1Q8TDI8 760 aa13.23□□□□□ -0.29
SNX11-206ENST00000580219 STK32BQ9NY57 414 aa13.23□□□□□ -0.29
SNX11-206ENST00000580219 POGKQ9P215 609 aa13.23□□□□□ -0.29
SNX11-206ENST00000580219 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
SNX11-206ENST00000580219 EVC2Q86UK5 1308 aa13.22□□□□□ -0.29
SNX11-206ENST00000580219 HTRA3P83110 453 aa13.22□□□□□ -0.29
SNX11-206ENST00000580219 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNX11-206ENST00000580219 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
SNX11-206ENST00000580219 ARHGEF10O15013 1369 aa13.21□□□□□ -0.29
SNX11-206ENST00000580219 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX11-206ENST00000580219 SLC15A2Q16348 729 aa13.21□□□□□ -0.29
SNX11-206ENST00000580219 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
SNX11-206ENST00000580219 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
SNX11-206ENST00000580219 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.3
SNX11-206ENST00000580219 ZBED9Q6R2W3 1325 aa13.2□□□□□ -0.3
SNX11-206ENST00000580219 TULP4Q9NRJ4 1543 aa13.2□□□□□ -0.3
SNX11-206ENST00000580219 PEAK1Q9H792 1746 aa13.2□□□□□ -0.3
SNX11-206ENST00000580219 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
SNX11-206ENST00000580219 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
SNX11-206ENST00000580219 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
SNX11-206ENST00000580219 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
SNX11-206ENST00000580219 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms