RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 PLEKHH1Q9ULM0 1364 aa9.62□□□□□ -0.87
CCDC178-209ENST00000579947 PPLO60437 1756 aa9.62□□□□□ -0.87
CCDC178-209ENST00000579947 CHRNA2Q15822 529 aa9.62□□□□□ -0.87
CCDC178-209ENST00000579947 WAPLQ7Z5K2 1190 aa9.61□□□□□ -0.87
CCDC178-209ENST00000579947 CHIC2Q9UKJ5 165 aa9.61□□□□□ -0.87
CCDC178-209ENST00000579947 CD2APQ9Y5K6 639 aa9.61□□□□□ -0.87
CCDC178-209ENST00000579947 ABCC11Q96J66 1382 aa9.6□□□□□ -0.87
CCDC178-209ENST00000579947 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
CCDC178-209ENST00000579947 NMRK2Q9NPI5 230 aa9.6□□□□□ -0.87
CCDC178-209ENST00000579947 C16orf71Q8IYS4 520 aaPredicted RBP9.6□□□□□ -0.87
CCDC178-209ENST00000579947 PNPLA7Q6ZV29 1317 aa9.6□□□□□ -0.87
CCDC178-209ENST00000579947 PXDNLA1KZ92 1463 aa9.6□□□□□ -0.87
CCDC178-209ENST00000579947 TRPM1Q7Z4N2 1603 aa9.6□□□□□ -0.87
CCDC178-209ENST00000579947 GPRASP1Q5JY77 1395 aa9.6□□□□□ -0.87
CCDC178-209ENST00000579947 ANKRD30BQ9BXX2 1392 aa9.59□□□□□ -0.87
CCDC178-209ENST00000579947 DDB1Q16531 1140 aa9.59□□□□□ -0.87
CCDC178-209ENST00000579947 CRB1P82279 1406 aa9.59□□□□□ -0.87
CCDC178-209ENST00000579947 TNRC6CQ9HCJ0 1690 aaKnown RBP9.59□□□□□ -0.87
CCDC178-209ENST00000579947 COL5A2P05997 1499 aaPredicted RBP9.58□□□□□ -0.88
CCDC178-209ENST00000579947 MARCH10Q8NA82 808 aaPredicted RBP9.58□□□□□ -0.88
CCDC178-209ENST00000579947 PIK3C2AO00443 1686 aa9.57□□□□□ -0.88
CCDC178-209ENST00000579947 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
CCDC178-209ENST00000579947 RPGRIP1LQ68CZ1 1315 aa9.57□□□□□ -0.88
CCDC178-209ENST00000579947 CPDO75976 1380 aa9.57□□□□□ -0.88
CCDC178-209ENST00000579947 FOXN1O15353 648 aa9.57□□□□□ -0.88
CCDC178-209ENST00000579947 ACIN1Q9UKV3 1341 aaKnown RBP9.57□□□□□ -0.88
CCDC178-209ENST00000579947 BTAF1O14981 1849 aa9.56□□□□□ -0.88
CCDC178-209ENST00000579947 SMC1BQ8NDV3 1235 aa9.56□□□□□ -0.88
CCDC178-209ENST00000579947 CTCFP49711 727 aaPredicted RBP9.55□□□□□ -0.88
CCDC178-209ENST00000579947 PKD1L3Q7Z443 1732 aa9.55□□□□□ -0.88
CCDC178-209ENST00000579947 ZC3H6P61129 1189 aaKnown RBP9.54□□□□□ -0.88
CCDC178-209ENST00000579947 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
CCDC178-209ENST00000579947 PLEKHG2Q9H7P9 1386 aa9.53□□□□□ -0.88
CCDC178-209ENST00000579947 LRRC4BQ9NT99 713 aa9.52□□□□□ -0.88
CCDC178-209ENST00000579947 STK26Q9P289 416 aa9.52□□□□□ -0.88
CCDC178-209ENST00000579947 IGSF1Q8N6C5 1336 aa9.52□□□□□ -0.89
CCDC178-209ENST00000579947 VPS8Q8N3P4 1428 aa9.52□□□□□ -0.89
CCDC178-209ENST00000579947 QRICH2Q9H0J4 1663 aa9.51□□□□□ -0.89
CCDC178-209ENST00000579947 NUP155O75694 1391 aa9.51□□□□□ -0.89
CCDC178-209ENST00000579947 YTHDC2Q9H6S0 1430 aaKnown RBP9.51□□□□□ -0.89
CCDC178-209ENST00000579947 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
CCDC178-209ENST00000579947 CCDC85CA6NKD9 419 aa9.5□□□□□ -0.89
CCDC178-209ENST00000579947 EIF3AQ14152 1382 aaKnown RBP9.5□□□□□ -0.89
CCDC178-209ENST00000579947 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
CCDC178-209ENST00000579947 ABCC6O95255 1503 aa9.5□□□□□ -0.89
CCDC178-209ENST00000579947 KANK4Q5T7N3 995 aaPredicted RBP9.49□□□□□ -0.89
CCDC178-209ENST00000579947 KDM2BQ8NHM5 1336 aa9.49□□□□□ -0.89
CCDC178-209ENST00000579947 KCPQ6ZWJ8 1503 aa9.49□□□□□ -0.89
CCDC178-209ENST00000579947 TFCP2L1Q9NZI6 479 aa9.49□□□□□ -0.89
CCDC178-209ENST00000579947 COL18A1P39060 1754 aa9.49□□□□□ -0.89
CCDC178-209ENST00000579947 ITSN1Q15811 1721 aa9.49□□□□□ -0.89
CCDC178-209ENST00000579947 VIRMAQ69YN4 1812 aaKnown RBP9.48□□□□□ -0.89
CCDC178-209ENST00000579947 USP6P35125 1406 aa9.48□□□□□ -0.89
CCDC178-209ENST00000579947 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
CCDC178-209ENST00000579947 LY75O60449 1722 aa9.48□□□□□ -0.89
CCDC178-209ENST00000579947 KIAA1551Q9HCM1 1747 aa9.48□□□□□ -0.89
CCDC178-209ENST00000579947 PRPF38BQ5VTL8 546 aaKnown RBP9.47□□□□□ -0.89
CCDC178-209ENST00000579947 USP54Q70EL1 1684 aa9.47□□□□□ -0.89
CCDC178-209ENST00000579947 LBX1P52954 281 aa9.46□□□□□ -0.89
CCDC178-209ENST00000579947 HSPA8P11142 646 aaKnown RBP9.45□□□□□ -0.9
CCDC178-209ENST00000579947 HIRIP3Q9BW71 556 aaPredicted RBP9.45□□□□□ -0.9
CCDC178-209ENST00000579947 RRAGCQ9HB90 399 aa9.45□□□□□ -0.9
CCDC178-209ENST00000579947 KIF13BQ9NQT8 1826 aa9.45□□□□□ -0.9
CCDC178-209ENST00000579947 PRR36Q9H6K5 1346 aa9.45□□□□□ -0.9
CCDC178-209ENST00000579947 COL23A1Q86Y22 540 aaPredicted RBP9.45□□□□□ -0.9
CCDC178-209ENST00000579947 CNTNAP1P78357 1384 aa9.44□□□□□ -0.9
CCDC178-209ENST00000579947 NGDNQ8NEJ9 315 aaKnown RBP9.44□□□□□ -0.9
CCDC178-209ENST00000579947 CREBZFQ9NS37 354 aa9.44□□□□□ -0.9
CCDC178-209ENST00000579947 ROCK1Q13464 1354 aa9.43□□□□□ -0.9
CCDC178-209ENST00000579947 GOLGB1Q14789 3259 aaKnown RBP9.43□□□□□ -0.9
CCDC178-209ENST00000579947 EXOC5O00471 708 aa9.43□□□□□ -0.9
CCDC178-209ENST00000579947 MSL1Q68DK7 614 aa9.43□□□□□ -0.9
CCDC178-209ENST00000579947 WBP1LQ9NX94 342 aa9.43□□□□□ -0.9
CCDC178-209ENST00000579947 TMEM132EQ6IEE7 984 aa9.43□□□□□ -0.9
CCDC178-209ENST00000579947 TOM1L2Q6ZVM7 507 aa9.43□□□□□ -0.9
CCDC178-209ENST00000579947 PIK3C2GO75747 1445 aa9.43□□□□□ -0.9
CCDC178-209ENST00000579947 ADGRF5Q8IZF2 1346 aa9.43□□□□□ -0.9
CCDC178-209ENST00000579947 ACSBG1Q96GR2 724 aa9.42□□□□□ -0.9
CCDC178-209ENST00000579947 WDR17Q8IZU2 1322 aa9.42□□□□□ -0.9
CCDC178-209ENST00000579947 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
CCDC178-209ENST00000579947 ARFGEF1Q9Y6D6 1849 aa9.41□□□□□ -0.9
CCDC178-209ENST00000579947 C9orf131Q5VYM1 1079 aa9.41□□□□□ -0.9
CCDC178-209ENST00000579947 MSH5O43196 834 aa9.4□□□□□ -0.9
CCDC178-209ENST00000579947 BRCA1P38398 1863 aaKnown RBP9.4□□□□□ -0.9
CCDC178-209ENST00000579947 SLIT3O75094 1523 aa9.4□□□□□ -0.9
CCDC178-209ENST00000579947 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
CCDC178-209ENST00000579947 ARHGAP27Q6ZUM4 889 aa9.39□□□□□ -0.91
CCDC178-209ENST00000579947 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
CCDC178-209ENST00000579947 C5P01031 1676 aa9.39□□□□□ -0.91
CCDC178-209ENST00000579947 PRAM1Q96QH2 718 aa9.39□□□□□ -0.91
CCDC178-209ENST00000579947 N4BP2Q86UW6 1770 aaPredicted RBP9.39□□□□□ -0.91
CCDC178-209ENST00000579947 CCDC7Q96M83 1385 aa9.39□□□□□ -0.91
CCDC178-209ENST00000579947 GCC1Q96CN9 775 aa9.38□□□□□ -0.91
CCDC178-209ENST00000579947 PPIP5K1Q6PFW1 1433 aa9.38□□□□□ -0.91
CCDC178-209ENST00000579947 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
CCDC178-209ENST00000579947 GCP02774 474 aa9.38□□□□□ -0.91
CCDC178-209ENST00000579947 FLAD1Q8NFF5 587 aa9.38□□□□□ -0.91
CCDC178-209ENST00000579947 THSD7BQ9C0I4 1608 aa9.38□□□□□ -0.91
CCDC178-209ENST00000579947 TNRC18O15417 2968 aaPredicted RBP9.37□□□□□ -0.91
CCDC178-209ENST00000579947 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms