RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
PCAT18-201ENST00000579458 TCEAL9Q9UHQ7 104 aa12.31□□□□□ -0.44
PCAT18-201ENST00000579458 IFT140Q96RY7 1462 aa12.31□□□□□ -0.44
PCAT18-201ENST00000579458 PALM3A6NDB9 673 aaPredicted RBP12.31□□□□□ -0.44
PCAT18-201ENST00000579458 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
PCAT18-201ENST00000579458 YTHDC1Q96MU7 727 aaKnown RBP12.31□□□□□ -0.44
PCAT18-201ENST00000579458 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCAT18-201ENST00000579458 GIGYF1O75420 1035 aaPredicted RBP12.3□□□□□ -0.44
PCAT18-201ENST00000579458 TNNI2P48788 182 aa12.3□□□□□ -0.44
PCAT18-201ENST00000579458 NUBP1P53384 320 aa12.3□□□□□ -0.44
PCAT18-201ENST00000579458 FBXO33Q7Z6M2 555 aa12.3□□□□□ -0.44
PCAT18-201ENST00000579458 CHST12Q9NRB3 414 aa12.3□□□□□ -0.44
PCAT18-201ENST00000579458 PRC1O43663 620 aa12.29□□□□□ -0.44
PCAT18-201ENST00000579458 PSEN1P49768 467 aa12.29□□□□□ -0.44
PCAT18-201ENST00000579458 LDLRAD1Q5T700 205 aa12.29□□□□□ -0.44
PCAT18-201ENST00000579458 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
PCAT18-201ENST00000579458 HDAC1Q13547 482 aaPredicted RBP12.28□□□□□ -0.44
PCAT18-201ENST00000579458 ZNF513Q8N8E2 541 aaPredicted RBP12.28□□□□□ -0.44
PCAT18-201ENST00000579458 TARBP1Q13395 1621 aaKnown RBP12.28□□□□□ -0.44
PCAT18-201ENST00000579458 FAM163BP0C2L3 166 aa12.28□□□□□ -0.44
PCAT18-201ENST00000579458 LDHAP00338 332 aaKnown RBP12.27□□□□□ -0.44
PCAT18-201ENST00000579458 RFC5P40937 340 aa12.27□□□□□ -0.44
PCAT18-201ENST00000579458 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.45
PCAT18-201ENST00000579458 ATP2B1P20020 1258 aa12.27□□□□□ -0.45
PCAT18-201ENST00000579458 POU5F1Q01860 360 aaKnown RBP12.27□□□□□ -0.45
PCAT18-201ENST00000579458 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
PCAT18-201ENST00000579458 EIF4G3O43432 1585 aaKnown RBP12.27□□□□□ -0.45
PCAT18-201ENST00000579458 SOWAHDA6NJG2 315 aa12.26□□□□□ -0.45
PCAT18-201ENST00000579458 CD53P19397 219 aa12.26□□□□□ -0.45
PCAT18-201ENST00000579458 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
PCAT18-201ENST00000579458 ZCRB1Q8TBF4 217 aaKnown RBP12.26□□□□□ -0.45
PCAT18-201ENST00000579458 CARD10Q9BWT7 1032 aa12.26□□□□□ -0.45
PCAT18-201ENST00000579458 ATG7O95352 703 aa12.25□□□□□ -0.45
PCAT18-201ENST00000579458 CBLBQ13191 982 aa12.25□□□□□ -0.45
PCAT18-201ENST00000579458 THRAP3Q9Y2W1 955 aaKnown RBP12.25□□□□□ -0.45
PCAT18-201ENST00000579458 ZNF746Q6NUN9 644 aaPredicted RBP12.25□□□□□ -0.45
PCAT18-201ENST00000579458 STK32AQ8WU08 396 aa12.25□□□□□ -0.45
PCAT18-201ENST00000579458 SLC39A13Q96H72 371 aa12.25□□□□□ -0.45
PCAT18-201ENST00000579458 RSPH9Q9H1X1 276 aaPredicted RBP12.25□□□□□ -0.45
PCAT18-201ENST00000579458 DIS3Q9Y2L1 958 aaKnown RBP12.25□□□□□ -0.45
PCAT18-201ENST00000579458 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
PCAT18-201ENST00000579458 DYTNA2CJ06 578 aa12.24□□□□□ -0.45
PCAT18-201ENST00000579458 DNAJA1P31689 397 aaKnown RBP12.24□□□□□ -0.45
PCAT18-201ENST00000579458 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
PCAT18-201ENST00000579458 RNF187Q5TA31 235 aaPredicted RBP12.24□□□□□ -0.45
PCAT18-201ENST00000579458 PPP1R18Q6NYC8 613 aa12.24□□□□□ -0.45
PCAT18-201ENST00000579458 NGDNQ8NEJ9 315 aaKnown RBP12.24□□□□□ -0.45
PCAT18-201ENST00000579458 UCN2Q96RP3 112 aa12.24□□□□□ -0.45
PCAT18-201ENST00000579458 BIN2Q9UBW5 565 aaPredicted RBP12.24□□□□□ -0.45
PCAT18-201ENST00000579458 SYCP2LQ5T4T6 812 aa12.24□□□□□ -0.45
PCAT18-201ENST00000579458 SLAIN2Q9P270 581 aa12.24□□□□□ -0.45
PCAT18-201ENST00000579458 CUX1P39880 1505 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 AMPD3Q01432 767 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 NBPF9Q3BBW0 867 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 CEP63Q96MT8 703 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 IER2Q9BTL4 223 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 LDHCP07864 332 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 LONRF1Q17RB8 773 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 ODR4Q5SWX8 454 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 MUC3BQ9H195 1237 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 CAPN10Q9HC96 672 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 SCINQ9Y6U3 715 aa12.23□□□□□ -0.45
PCAT18-201ENST00000579458 AQRO60306 1485 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCAT18-201ENST00000579458 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
PCAT18-201ENST00000579458 TSC1Q92574 1164 aa12.22□□□□□ -0.45
PCAT18-201ENST00000579458 ARPC5LQ9BPX5 153 aa12.22□□□□□ -0.45
PCAT18-201ENST00000579458 TFIP11Q9UBB9 837 aaKnown RBP12.22□□□□□ -0.45
PCAT18-201ENST00000579458 IGF1RP08069 1367 aa12.22□□□□□ -0.45
PCAT18-201ENST00000579458 TMEM164Q5U3C3 297 aa12.22□□□□□ -0.45
PCAT18-201ENST00000579458 CEP120Q8N960 986 aa12.22□□□□□ -0.45
PCAT18-201ENST00000579458 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.45
PCAT18-201ENST00000579458 TDO2P48775 406 aa12.21□□□□□ -0.45
PCAT18-201ENST00000579458 SKAP1Q86WV1 359 aa12.21□□□□□ -0.45
PCAT18-201ENST00000579458 EPAS1Q99814 870 aa12.21□□□□□ -0.45
PCAT18-201ENST00000579458 RRM1P23921 792 aa12.21□□□□□ -0.46
PCAT18-201ENST00000579458 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.46
PCAT18-201ENST00000579458 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.46
PCAT18-201ENST00000579458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.46
PCAT18-201ENST00000579458 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
PCAT18-201ENST00000579458 KANK3Q6NY19 840 aa12.2□□□□□ -0.46
PCAT18-201ENST00000579458 PCGF5Q86SE9 256 aa12.2□□□□□ -0.46
PCAT18-201ENST00000579458 METTL16Q86W50 562 aaKnown RBP12.2□□□□□ -0.46
PCAT18-201ENST00000579458 RASSF7Q02833 373 aa12.2□□□□□ -0.46
PCAT18-201ENST00000579458 ACBD3Q9H3P7 528 aa12.2□□□□□ -0.46
PCAT18-201ENST00000579458 SOGA1O94964 1423 aa12.19□□□□□ -0.46
PCAT18-201ENST00000579458 WDR75Q8IWA0 830 aaKnown RBP12.19□□□□□ -0.46
PCAT18-201ENST00000579458 CDC5LQ99459 802 aaKnown RBP12.19□□□□□ -0.46
PCAT18-201ENST00000579458 ZMIZ1Q9ULJ6 1067 aa12.19□□□□□ -0.46
PCAT18-201ENST00000579458 TGFB3P10600 412 aa12.19□□□□□ -0.46
PCAT18-201ENST00000579458 EFCAB2Q5VUJ9 269 aa12.18□□□□□ -0.46
PCAT18-201ENST00000579458 BRINP2Q9C0B6 783 aa12.18□□□□□ -0.46
PCAT18-201ENST00000579458 NUTM2FA1L443 756 aa12.18□□□□□ -0.46
PCAT18-201ENST00000579458 IGHDP01880 384 aa12.18□□□□□ -0.46
PCAT18-201ENST00000579458 PDGFRBP09619 1106 aa12.18□□□□□ -0.46
PCAT18-201ENST00000579458 SAFB2Q14151 953 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCAT18-201ENST00000579458 TNFRSF10BO14763 440 aa12.17□□□□□ -0.46
PCAT18-201ENST00000579458 FAM200BP0CF97 657 aa12.17□□□□□ -0.46
PCAT18-201ENST00000579458 C10orf62Q5T681 223 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms