RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 NUTM2DQ5VT03 806 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-206ENST00000578093 MST1RQ04912 1400 aa6.19□□□□□ -1.42
PTPRM-206ENST00000578093 NCOA3Q9Y6Q9 1424 aa6.19□□□□□ -1.42
PTPRM-206ENST00000578093 LAMC1P11047 1609 aa6.19□□□□□ -1.42
PTPRM-206ENST00000578093 CLTCL1P53675 1640 aa6.19□□□□□ -1.42
PTPRM-206ENST00000578093 GFRA3O60609 400 aa6.19□□□□□ -1.42
PTPRM-206ENST00000578093 SMYD5Q6GMV2 418 aa6.19□□□□□ -1.42
PTPRM-206ENST00000578093 CDK12Q9NYV4 1490 aaPredicted RBP6.19□□□□□ -1.42
PTPRM-206ENST00000578093 SPATA31A6Q5VVP1 1343 aa6.19□□□□□ -1.42
PTPRM-206ENST00000578093 PPP1R15AO75807 674 aaPredicted RBP6.18□□□□□ -1.42
PTPRM-206ENST00000578093 MEX3CQ5U5Q3 659 aaKnown RBP6.18□□□□□ -1.42
PTPRM-206ENST00000578093 BRINP3Q76B58 766 aa6.18□□□□□ -1.42
PTPRM-206ENST00000578093 EMILIN3Q9NT22 766 aa6.18□□□□□ -1.42
PTPRM-206ENST00000578093 SLC52A1Q9NWF4 448 aa6.18□□□□□ -1.42
PTPRM-206ENST00000578093 STK17AQ9UEE5 414 aa6.18□□□□□ -1.42
PTPRM-206ENST00000578093 NEXMIFQ5QGS0 1516 aa6.18□□□□□ -1.42
PTPRM-206ENST00000578093 DCCP43146 1447 aa6.17□□□□□ -1.42
PTPRM-206ENST00000578093 SETD5Q9C0A6 1442 aa6.17□□□□□ -1.42
PTPRM-206ENST00000578093 DPYSL4O14531 572 aa6.17□□□□□ -1.42
PTPRM-206ENST00000578093 SLC34A2O95436 690 aa6.17□□□□□ -1.42
PTPRM-206ENST00000578093 DDX17Q92841 729 aaKnown RBP6.17□□□□□ -1.42
PTPRM-206ENST00000578093 TBX22Q9Y458 520 aa6.17□□□□□ -1.42
PTPRM-206ENST00000578093 PIK3R4Q99570 1358 aa6.17□□□□□ -1.42
PTPRM-206ENST00000578093 MARF1Q9Y4F3 1742 aaKnown RBP6.16□□□□□ -1.42
PTPRM-206ENST00000578093 NUTM2BA6NNL0 878 aaPredicted RBP6.16□□□□□ -1.42
PTPRM-206ENST00000578093 NUTM2EB1AL46 878 aaPredicted RBP6.16□□□□□ -1.42
PTPRM-206ENST00000578093 ZNF772Q68DY9 489 aaPredicted RBP6.16□□□□□ -1.42
PTPRM-206ENST00000578093 C14orf37Q86TY3 774 aa6.16□□□□□ -1.42
PTPRM-206ENST00000578093 NUTM2AQ8IVF1 878 aaPredicted RBP6.16□□□□□ -1.42
PTPRM-206ENST00000578093 OXER1Q8TDS5 423 aa6.16□□□□□ -1.42
PTPRM-206ENST00000578093 PTCD2Q8WV60 388 aaKnown RBP6.16□□□□□ -1.42
PTPRM-206ENST00000578093 KHSRPQ92945 711 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPRM-206ENST00000578093 COL22A1Q8NFW1 1626 aaPredicted RBP6.16□□□□□ -1.42
PTPRM-206ENST00000578093 AFF2P51816 1311 aa6.16□□□□□ -1.42
PTPRM-206ENST00000578093 METP08581 1390 aa6.16□□□□□ -1.42
PTPRM-206ENST00000578093 PNPLA6Q8IY17 1366 aa6.16□□□□□ -1.42
PTPRM-206ENST00000578093 ADGRL3Q9HAR2 1447 aa6.16□□□□□ -1.42
PTPRM-206ENST00000578093 KIF1BO60333 1816 aa6.15□□□□□ -1.42
PTPRM-206ENST00000578093 TESPA1A2RU30 521 aaPredicted RBP6.15□□□□□ -1.42
PTPRM-206ENST00000578093 SEMA3EO15041 775 aa6.15□□□□□ -1.42
PTPRM-206ENST00000578093 FAM50AQ14320 339 aaKnown RBP6.15□□□□□ -1.42
PTPRM-206ENST00000578093 PDIA6Q15084 440 aa6.15□□□□□ -1.42
PTPRM-206ENST00000578093 C19orf44Q9H6X5 657 aa6.15□□□□□ -1.42
PTPRM-206ENST00000578093 ATF3P18847 181 aa6.14□□□□□ -1.43
PTPRM-206ENST00000578093 RXRBP28702 533 aa6.14□□□□□ -1.43
PTPRM-206ENST00000578093 PTPN5P54829 565 aa6.14□□□□□ -1.43
PTPRM-206ENST00000578093 AMOTL2Q9Y2J4 779 aa6.14□□□□□ -1.43
PTPRM-206ENST00000578093 PPLO60437 1756 aa6.13□□□□□ -1.43
PTPRM-206ENST00000578093 TK2O00142 265 aa6.13□□□□□ -1.43
PTPRM-206ENST00000578093 TREML4Q6UXN2 200 aa6.13□□□□□ -1.43
PTPRM-206ENST00000578093 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTPRM-206ENST00000578093 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
PTPRM-206ENST00000578093 ROCK1Q13464 1354 aa6.13□□□□□ -1.43
PTPRM-206ENST00000578093 C1orf167Q5SNV9 1468 aa6.13□□□□□ -1.43
PTPRM-206ENST00000578093 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.13□□□□□ -1.43
PTPRM-206ENST00000578093 BRWD3Q6RI45 1802 aa6.13□□□□□ -1.43
PTPRM-206ENST00000578093 EVI5O60447 810 aa6.12□□□□□ -1.43
PTPRM-206ENST00000578093 NUP155O75694 1391 aa6.12□□□□□ -1.43
PTPRM-206ENST00000578093 C8orf37Q96NL8 207 aa6.12□□□□□ -1.43
PTPRM-206ENST00000578093 ABCA3Q99758 1704 aa6.12□□□□□ -1.43
PTPRM-206ENST00000578093 PCDHGA4Q9Y5G9 962 aa6.12□□□□□ -1.43
PTPRM-206ENST00000578093 IFT172Q9UG01 1749 aa6.11□□□□□ -1.43
PTPRM-206ENST00000578093 GLI3P10071 1580 aa6.11□□□□□ -1.43
PTPRM-206ENST00000578093 CDC42BPGQ6DT37 1551 aa6.11□□□□□ -1.43
PTPRM-206ENST00000578093 MYOM2P54296 1465 aa6.11□□□□□ -1.43
PTPRM-206ENST00000578093 PTCH1Q13635 1447 aa6.11□□□□□ -1.43
PTPRM-206ENST00000578093 NRG2O14511 850 aaPredicted RBP6.11□□□□□ -1.43
PTPRM-206ENST00000578093 LMOD2Q6P5Q4 547 aa6.11□□□□□ -1.43
PTPRM-206ENST00000578093 PXDNQ92626 1479 aa6.1□□□□□ -1.43
PTPRM-206ENST00000578093 ATRNO75882 1429 aa6.1□□□□□ -1.43
PTPRM-206ENST00000578093 PRAG1Q86YV5 1406 aa6.1□□□□□ -1.43
PTPRM-206ENST00000578093 ROBO2Q9HCK4 1378 aa6.1□□□□□ -1.43
PTPRM-206ENST00000578093 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
PTPRM-206ENST00000578093 ADAMTS2O95450 1211 aa6.1□□□□□ -1.43
PTPRM-206ENST00000578093 HDGFP51858 240 aaKnown RBP6.1□□□□□ -1.43
PTPRM-206ENST00000578093 RBM6P78332 1123 aaKnown RBP6.1□□□□□ -1.43
PTPRM-206ENST00000578093 TPRNQ4KMQ1 711 aa6.1□□□□□ -1.43
PTPRM-206ENST00000578093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPRM-206ENST00000578093 KNDC1Q76NI1 1749 aa6.1□□□□□ -1.43
PTPRM-206ENST00000578093 PLCH1Q4KWH8 1693 aa6.1□□□□□ -1.43
PTPRM-206ENST00000578093 RGPD8O14715 1765 aaPredicted RBP6.09□□□□□ -1.43
PTPRM-206ENST00000578093 FMN2Q9NZ56 1722 aa6.09□□□□□ -1.43
PTPRM-206ENST00000578093 LRRC59Q96AG4 307 aaKnown RBP6.09□□□□□ -1.43
PTPRM-206ENST00000578093 ORAI2Q96SN7 254 aa6.09□□□□□ -1.43
PTPRM-206ENST00000578093 QTRT2Q9H974 415 aaKnown RBP6.09□□□□□ -1.43
PTPRM-206ENST00000578093 USP32Q8NFA0 1604 aa6.09□□□□□ -1.43
PTPRM-206ENST00000578093 ATAD2Q6PL18 1390 aa6.08□□□□□ -1.44
PTPRM-206ENST00000578093 SOS2Q07890 1332 aaPredicted RBP6.08□□□□□ -1.44
PTPRM-206ENST00000578093 GRXCR2A6NFK2 248 aa6.08□□□□□ -1.44
PTPRM-206ENST00000578093 ITGAEP38570 1179 aa6.08□□□□□ -1.44
PTPRM-206ENST00000578093 MLLT3P42568 568 aaPredicted RBP6.08□□□□□ -1.44
PTPRM-206ENST00000578093 ZNF326Q5BKZ1 582 aaKnown RBP6.08□□□□□ -1.44
PTPRM-206ENST00000578093 ANO8Q9HCE9 1232 aaPredicted RBP6.08□□□□□ -1.44
PTPRM-206ENST00000578093 BCL9LQ86UU0 1499 aa6.08□□□□□ -1.44
PTPRM-206ENST00000578093 ARHGAP33O14559 1287 aa6.07□□□□□ -1.44
PTPRM-206ENST00000578093 NGLY1Q96IV0 654 aa6.07□□□□□ -1.44
PTPRM-206ENST00000578093 USP21Q9UK80 565 aa6.07□□□□□ -1.44
PTPRM-206ENST00000578093 NRAPQ86VF7 1730 aa6.07□□□□□ -1.44
PTPRM-206ENST00000578093 KIF1AQ12756 1690 aa6.07□□□□□ -1.44
PTPRM-206ENST00000578093 LRP5O75197 1615 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms