RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 NR1H3Q13133 447 aa12.98□□□□□ -0.33
SNRPD1-202ENST00000577906 CCDC116Q8IYX3 515 aa12.98□□□□□ -0.33
SNRPD1-202ENST00000577906 ZNF330Q9Y3S2 320 aaPredicted RBP12.98□□□□□ -0.33
SNRPD1-202ENST00000577906 EMILIN1Q9Y6C2 1016 aa12.98□□□□□ -0.33
SNRPD1-202ENST00000577906 ZIC2O95409 532 aaPredicted RBP12.97□□□□□ -0.33
SNRPD1-202ENST00000577906 ZNF592Q92610 1267 aa12.97□□□□□ -0.33
SNRPD1-202ENST00000577906 GPR37L1O60883 481 aa12.96□□□□□ -0.33
SNRPD1-202ENST00000577906 MCM6Q14566 821 aa12.96□□□□□ -0.33
SNRPD1-202ENST00000577906 TBC1D2BQ9UPU7 963 aa12.96□□□□□ -0.33
SNRPD1-202ENST00000577906 PCDHB9Q9Y5E1 797 aa12.96□□□□□ -0.33
SNRPD1-202ENST00000577906 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
SNRPD1-202ENST00000577906 DHX9Q08211 1270 aaKnown RBP12.95□□□□□ -0.34
SNRPD1-202ENST00000577906 ITPKCQ96DU7 683 aa12.95□□□□□ -0.34
SNRPD1-202ENST00000577906 SENP2Q9HC62 589 aa12.95□□□□□ -0.34
SNRPD1-202ENST00000577906 GMPR2Q9P2T1 348 aaKnown RBP12.95□□□□□ -0.34
SNRPD1-202ENST00000577906 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
SNRPD1-202ENST00000577906 POTECB2RU33 542 aa12.93□□□□□ -0.34
SNRPD1-202ENST00000577906 FLIIQ13045 1269 aa12.93□□□□□ -0.34
SNRPD1-202ENST00000577906 INTS6LQ5JSJ4 861 aaKnown RBP12.93□□□□□ -0.34
SNRPD1-202ENST00000577906 ZFAND3Q9H8U3 227 aa12.93□□□□□ -0.34
SNRPD1-202ENST00000577906 PPP1R26Q5T8A7 1209 aaPredicted RBP12.92□□□□□ -0.34
SNRPD1-202ENST00000577906 C11orf95C9JLR9 678 aaPredicted RBP12.91□□□□□ -0.34
SNRPD1-202ENST00000577906 KIFC2Q96AC6 838 aa12.91□□□□□ -0.34
SNRPD1-202ENST00000577906 ESPNB1AK53 854 aa12.9□□□□□ -0.34
SNRPD1-202ENST00000577906 TRIM46Q7Z4K8 759 aa12.9□□□□□ -0.34
SNRPD1-202ENST00000577906 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.34
SNRPD1-202ENST00000577906 GDPD2Q9HCC8 539 aa12.9□□□□□ -0.34
SNRPD1-202ENST00000577906 BMP1P13497 986 aa12.89□□□□□ -0.35
SNRPD1-202ENST00000577906 SCARF1Q14162 830 aa12.89□□□□□ -0.35
SNRPD1-202ENST00000577906 MRPL14Q6P1L8 145 aaKnown RBP12.89□□□□□ -0.35
SNRPD1-202ENST00000577906 TRIM52Q96A61 297 aa12.89□□□□□ -0.35
SNRPD1-202ENST00000577906 ABL2P42684 1182 aa12.88□□□□□ -0.35
SNRPD1-202ENST00000577906 CCDC125Q86Z20 511 aa12.88□□□□□ -0.35
SNRPD1-202ENST00000577906 TRIM47Q96LD4 638 aa12.88□□□□□ -0.35
SNRPD1-202ENST00000577906 RAB15P59190 212 aa12.87□□□□□ -0.35
SNRPD1-202ENST00000577906 UPP2O95045 317 aa12.86□□□□□ -0.35
SNRPD1-202ENST00000577906 IRF5Q13568 498 aa12.86□□□□□ -0.35
SNRPD1-202ENST00000577906 RNF20Q5VTR2 975 aa12.86□□□□□ -0.35
SNRPD1-202ENST00000577906 EIF4G2P78344 907 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNRPD1-202ENST00000577906 WASHC4Q2M389 1173 aa12.85□□□□□ -0.35
SNRPD1-202ENST00000577906 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
SNRPD1-202ENST00000577906 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
SNRPD1-202ENST00000577906 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
SNRPD1-202ENST00000577906 ERVH48-1M5A8F1 160 aa12.83□□□□□ -0.36
SNRPD1-202ENST00000577906 RAD21O60216 631 aa12.83□□□□□ -0.36
SNRPD1-202ENST00000577906 ZFP42Q96MM3 310 aa12.83□□□□□ -0.36
SNRPD1-202ENST00000577906 TSEN34Q9BSV6 310 aaKnown RBP12.83□□□□□ -0.36
SNRPD1-202ENST00000577906 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
SNRPD1-202ENST00000577906 PURBQ96QR8 312 aaKnown RBP12.82□□□□□ -0.36
SNRPD1-202ENST00000577906 SNRPBP14678 240 aaKnown RBP12.81□□□□□ -0.36
SNRPD1-202ENST00000577906 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
SNRPD1-202ENST00000577906 Q6ZVU0 165 aa12.81□□□□□ -0.36
SNRPD1-202ENST00000577906 LINC00528Q8N1L1 170 aa12.81□□□□□ -0.36
SNRPD1-202ENST00000577906 TMPRSS4Q9NRS4 437 aa12.81□□□□□ -0.36
SNRPD1-202ENST00000577906 CBLBQ13191 982 aa12.8□□□□□ -0.36
SNRPD1-202ENST00000577906 BMP2P12643 396 aa12.79□□□□□ -0.36
SNRPD1-202ENST00000577906 VAC14Q08AM6 782 aa12.79□□□□□ -0.36
SNRPD1-202ENST00000577906 C6orf118Q5T5N4 469 aa12.79□□□□□ -0.36
SNRPD1-202ENST00000577906 ZNF784Q8NCA9 323 aaPredicted RBP12.79□□□□□ -0.36
SNRPD1-202ENST00000577906 CEP126Q9P2H0 1117 aa12.78□□□□□ -0.36
SNRPD1-202ENST00000577906 SOX11P35716 441 aa12.76□□□□□ -0.37
SNRPD1-202ENST00000577906 POM121Q96HA1 1249 aa12.76□□□□□ -0.37
SNRPD1-202ENST00000577906 LILRA1O75019 489 aa12.75□□□□□ -0.37
SNRPD1-202ENST00000577906 ZNF775Q96BV0 537 aaPredicted RBP12.75□□□□□ -0.37
SNRPD1-202ENST00000577906 CYLDQ9NQC7 956 aa12.74□□□□□ -0.37
SNRPD1-202ENST00000577906 SEMA3FQ13275 785 aa12.73□□□□□ -0.37
SNRPD1-202ENST00000577906 ADH1AP07327 375 aa12.72□□□□□ -0.37
SNRPD1-202ENST00000577906 PCDHB11Q9Y5F2 797 aa12.72□□□□□ -0.37
SNRPD1-202ENST00000577906 SPINT1O43278 529 aa12.71□□□□□ -0.37
SNRPD1-202ENST00000577906 ADD1P35611 737 aaKnown RBP12.71□□□□□ -0.37
SNRPD1-202ENST00000577906 RELBQ01201 579 aa12.71□□□□□ -0.37
SNRPD1-202ENST00000577906 SLFNL1Q499Z3 407 aa12.71□□□□□ -0.37
SNRPD1-202ENST00000577906 CC2D2BQ6DHV5 1058 aa12.71□□□□□ -0.37
SNRPD1-202ENST00000577906 AGBL1Q96MI9 1066 aa12.71□□□□□ -0.37
SNRPD1-202ENST00000577906 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
SNRPD1-202ENST00000577906 ERVK-9P63128 1117 aa12.7□□□□□ -0.38
SNRPD1-202ENST00000577906 MAN1A2O60476 641 aa12.69□□□□□ -0.38
SNRPD1-202ENST00000577906 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
SNRPD1-202ENST00000577906 PTGIRP43119 386 aa12.68□□□□□ -0.38
SNRPD1-202ENST00000577906 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
SNRPD1-202ENST00000577906 RNF135Q8IUD6 432 aa12.67□□□□□ -0.38
SNRPD1-202ENST00000577906 PHTF2Q8N3S3 785 aa12.67□□□□□ -0.38
SNRPD1-202ENST00000577906 CCDC85AQ96PX6 553 aaPredicted RBP12.67□□□□□ -0.38
SNRPD1-202ENST00000577906 ZNF395Q9H8N7 513 aaPredicted RBP12.66□□□□□ -0.38
SNRPD1-202ENST00000577906 ATP5J2-PTCD1G3V325 749 aa12.65□□□□□ -0.38
SNRPD1-202ENST00000577906 MYCP01106 439 aaPredicted RBP12.65□□□□□ -0.38
SNRPD1-202ENST00000577906 CYP2U1Q7Z449 544 aa12.65□□□□□ -0.38
SNRPD1-202ENST00000577906 INSM2Q96T92 566 aaPredicted RBP12.64□□□□□ -0.39
SNRPD1-202ENST00000577906 DOLKQ9UPQ8 538 aa12.64□□□□□ -0.39
SNRPD1-202ENST00000577906 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
SNRPD1-202ENST00000577906 SCTRP47872 440 aa12.63□□□□□ -0.39
SNRPD1-202ENST00000577906 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.63□□□□□ -0.39
SNRPD1-202ENST00000577906 KDF1Q8NAX2 398 aaPredicted RBP12.63□□□□□ -0.39
SNRPD1-202ENST00000577906 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
SNRPD1-202ENST00000577906 ALG2Q9H553 416 aa12.63□□□□□ -0.39
SNRPD1-202ENST00000577906 POLMQ9NP87 494 aaPredicted RBP12.63□□□□□ -0.39
SNRPD1-202ENST00000577906 NXF1Q9UBU9 619 aaKnown RBP12.63□□□□□ -0.39
SNRPD1-202ENST00000577906 TERTO14746 1132 aaKnown RBP12.62□□□□□ -0.39
SNRPD1-202ENST00000577906 USP4Q13107 963 aa12.62□□□□□ -0.39
SNRPD1-202ENST00000577906 CDCA7Q9BWT1 371 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms