RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 SOX12O15370 315 aa17.25■□□□□ 0.35
MKS1-206ENST00000577824 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
MKS1-206ENST00000577824 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
MKS1-206ENST00000577824 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
MKS1-206ENST00000577824 FBLN1P23142 703 aa17.24■□□□□ 0.35
MKS1-206ENST00000577824 HOXC9P31274 260 aa17.24■□□□□ 0.35
MKS1-206ENST00000577824 IP6K1Q92551 441 aa17.24■□□□□ 0.35
MKS1-206ENST00000577824 EMILIN1Q9Y6C2 1016 aa17.24■□□□□ 0.35
MKS1-206ENST00000577824 RGPD5Q99666 1765 aa17.24■□□□□ 0.35
MKS1-206ENST00000577824 MEX3CQ5U5Q3 659 aaKnown RBP17.23■□□□□ 0.35
MKS1-206ENST00000577824 ERBB3P21860 1342 aa17.22■□□□□ 0.35
MKS1-206ENST00000577824 CHRNA2Q15822 529 aa17.22■□□□□ 0.35
MKS1-206ENST00000577824 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
MKS1-206ENST00000577824 AXIN2Q9Y2T1 843 aa17.22■□□□□ 0.35
MKS1-206ENST00000577824 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
MKS1-206ENST00000577824 TNNT2P45379 298 aaPredicted RBP17.21■□□□□ 0.35
MKS1-206ENST00000577824 ATRNO75882 1429 aa17.21■□□□□ 0.34
MKS1-206ENST00000577824 NCAPD2Q15021 1401 aa17.21■□□□□ 0.34
MKS1-206ENST00000577824 AFF2P51816 1311 aa17.21■□□□□ 0.34
MKS1-206ENST00000577824 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.34
MKS1-206ENST00000577824 NGLY1Q96IV0 654 aa17.2■□□□□ 0.34
MKS1-206ENST00000577824 BTG4Q9NY30 223 aa17.2■□□□□ 0.34
MKS1-206ENST00000577824 RGPD1P0DJD0 1748 aa17.2■□□□□ 0.34
MKS1-206ENST00000577824 AMPHP49418 695 aa17.19■□□□□ 0.34
MKS1-206ENST00000577824 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
MKS1-206ENST00000577824 MTHFSP49914 203 aa17.18■□□□□ 0.34
MKS1-206ENST00000577824 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
MKS1-206ENST00000577824 CRB1P82279 1406 aa17.18■□□□□ 0.34
MKS1-206ENST00000577824 WNK3Q9BYP7 1800 aa17.17■□□□□ 0.34
MKS1-206ENST00000577824 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
MKS1-206ENST00000577824 GLI3P10071 1580 aa17.16■□□□□ 0.34
MKS1-206ENST00000577824 ANP32CO43423 234 aa17.16■□□□□ 0.34
MKS1-206ENST00000577824 USP21Q9UK80 565 aa17.16■□□□□ 0.34
MKS1-206ENST00000577824 ZBTB7CA1YPR0 619 aa17.15■□□□□ 0.34
MKS1-206ENST00000577824 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
MKS1-206ENST00000577824 VPS72Q15906 364 aa17.15■□□□□ 0.34
MKS1-206ENST00000577824 ZNF772Q68DY9 489 aaPredicted RBP17.15■□□□□ 0.34
MKS1-206ENST00000577824 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
MKS1-206ENST00000577824 RGS17Q9UGC6 210 aaPredicted RBP17.14■□□□□ 0.33
MKS1-206ENST00000577824 PPM1GO15355 546 aaPredicted RBP17.13■□□□□ 0.33
MKS1-206ENST00000577824 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
MKS1-206ENST00000577824 DIEXFQ68CQ4 756 aaKnown RBP17.13■□□□□ 0.33
MKS1-206ENST00000577824 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
MKS1-206ENST00000577824 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
MKS1-206ENST00000577824 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
MKS1-206ENST00000577824 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
MKS1-206ENST00000577824 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
MKS1-206ENST00000577824 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
MKS1-206ENST00000577824 TRPC5Q9UL62 973 aaPredicted RBP17.12■□□□□ 0.33
MKS1-206ENST00000577824 SPATA31A1Q5TZJ5 1347 aa17.12■□□□□ 0.33
MKS1-206ENST00000577824 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
MKS1-206ENST00000577824 DISP2A7MBM2 1401 aa17.12■□□□□ 0.33
MKS1-206ENST00000577824 IL13P35225 146 aa17.11■□□□□ 0.33
MKS1-206ENST00000577824 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
MKS1-206ENST00000577824 CARD10Q9BWT7 1032 aa17.11■□□□□ 0.33
MKS1-206ENST00000577824 KDRP35968 1356 aa17.11■□□□□ 0.33
MKS1-206ENST00000577824 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
MKS1-206ENST00000577824 THRAP3Q9Y2W1 955 aaKnown RBP17.1■□□□□ 0.33
MKS1-206ENST00000577824 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
MKS1-206ENST00000577824 DIAPH1O60610 1272 aaKnown RBP17.08■□□□□ 0.32
MKS1-206ENST00000577824 EVA1CP58658 441 aa17.08■□□□□ 0.32
MKS1-206ENST00000577824 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.32
MKS1-206ENST00000577824 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
MKS1-206ENST00000577824 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
MKS1-206ENST00000577824 NBPF6Q5VWK0 638 aa17.07■□□□□ 0.32
MKS1-206ENST00000577824 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
MKS1-206ENST00000577824 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
MKS1-206ENST00000577824 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
MKS1-206ENST00000577824 EYA1Q99502 592 aa17.07■□□□□ 0.32
MKS1-206ENST00000577824 TCP11L2Q8N4U5 519 aa17.06■□□□□ 0.32
MKS1-206ENST00000577824 LTV1Q96GA3 475 aaPredicted RBP17.06■□□□□ 0.32
MKS1-206ENST00000577824 QTRT2Q9H974 415 aaKnown RBP17.06■□□□□ 0.32
MKS1-206ENST00000577824 PKD1L3Q7Z443 1732 aa17.06■□□□□ 0.32
MKS1-206ENST00000577824 ONECUT3O60422 494 aaPredicted RBP17.05■□□□□ 0.32
MKS1-206ENST00000577824 RBM6P78332 1123 aaKnown RBP17.05■□□□□ 0.32
MKS1-206ENST00000577824 MEGF6O75095 1541 aa17.05■□□□□ 0.32
MKS1-206ENST00000577824 OVOS2A0A0G2JMS6 1433 aa17.04■□□□□ 0.32
MKS1-206ENST00000577824 POTEAQ6S8J7 498 aa17.04■□□□□ 0.32
MKS1-206ENST00000577824 NLRP2Q9NX02 1062 aa17.04■□□□□ 0.32
MKS1-206ENST00000577824 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
MKS1-206ENST00000577824 RGS12O14924 1447 aa17.03■□□□□ 0.32
MKS1-206ENST00000577824 TNS2Q63HR2 1409 aa17.03■□□□□ 0.32
MKS1-206ENST00000577824 EP400Q96L91 3159 aa17.02■□□□□ 0.32
MKS1-206ENST00000577824 CCER2I3L3R5 266 aa17.02■□□□□ 0.32
MKS1-206ENST00000577824 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.32
MKS1-206ENST00000577824 NUDCQ9Y266 331 aa17.02■□□□□ 0.32
MKS1-206ENST00000577824 CCDC184Q52MB2 194 aa17■□□□□ 0.31
MKS1-206ENST00000577824 USHBP1Q8N6Y0 703 aa17■□□□□ 0.31
MKS1-206ENST00000577824 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
MKS1-206ENST00000577824 IL2RBP14784 551 aa16.99■□□□□ 0.31
MKS1-206ENST00000577824 RXRBP28702 533 aa16.99■□□□□ 0.31
MKS1-206ENST00000577824 FAM98CQ17RN3 349 aaKnown RBP16.98■□□□□ 0.31
MKS1-206ENST00000577824 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
MKS1-206ENST00000577824 AEBP1Q8IUX7 1158 aa16.98■□□□□ 0.31
MKS1-206ENST00000577824 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
MKS1-206ENST00000577824 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
MKS1-206ENST00000577824 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
MKS1-206ENST00000577824 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
MKS1-206ENST00000577824 FCHSD2O94868 740 aa16.96■□□□□ 0.31
MKS1-206ENST00000577824 MIER1Q8N108 512 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms