RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 TECPR2O15040 1411 aa13.86□□□□□ -0.19
CRLF3-202ENST00000577725 FMN2Q9NZ56 1722 aa13.85□□□□□ -0.19
CRLF3-202ENST00000577725 CNGB1Q14028 1251 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-202ENST00000577725 USP35Q9P2H5 1018 aa13.85□□□□□ -0.19
CRLF3-202ENST00000577725 RGPD3A6NKT7 1758 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-202ENST00000577725 RGPD4Q7Z3J3 1758 aa13.85□□□□□ -0.19
CRLF3-202ENST00000577725 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
CRLF3-202ENST00000577725 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
CRLF3-202ENST00000577725 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
CRLF3-202ENST00000577725 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
CRLF3-202ENST00000577725 ATP10DQ9P241 1426 aa13.83□□□□□ -0.2
CRLF3-202ENST00000577725 GOLGB1Q14789 3259 aaKnown RBP13.83□□□□□ -0.2
CRLF3-202ENST00000577725 ZBTB22O15209 634 aa13.83□□□□□ -0.2
CRLF3-202ENST00000577725 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
CRLF3-202ENST00000577725 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
CRLF3-202ENST00000577725 TNS4Q8IZW8 715 aa13.83□□□□□ -0.2
CRLF3-202ENST00000577725 CABP2Q9NPB3 220 aa13.83□□□□□ -0.2
CRLF3-202ENST00000577725 SLC15A2Q16348 729 aa13.82□□□□□ -0.2
CRLF3-202ENST00000577725 PANK3Q9H999 370 aa13.82□□□□□ -0.2
CRLF3-202ENST00000577725 APLP1P51693 650 aa13.81□□□□□ -0.2
CRLF3-202ENST00000577725 ANP32CO43423 234 aa13.8□□□□□ -0.2
CRLF3-202ENST00000577725 SRPK2P78362 688 aaKnown RBP13.8□□□□□ -0.2
CRLF3-202ENST00000577725 PROM2Q8N271 834 aa13.8□□□□□ -0.2
CRLF3-202ENST00000577725 TMC1Q8TDI8 760 aa13.8□□□□□ -0.2
CRLF3-202ENST00000577725 SIRT1Q96EB6 747 aa13.8□□□□□ -0.2
CRLF3-202ENST00000577725 CDK19Q9BWU1 502 aa13.8□□□□□ -0.2
CRLF3-202ENST00000577725 OVOS2A0A0G2JMS6 1433 aa13.8□□□□□ -0.2
CRLF3-202ENST00000577725 OVOS2A0A0J9YW53 1432 aa13.8□□□□□ -0.2
CRLF3-202ENST00000577725 OVOS2Q6IE36 1432 aa13.8□□□□□ -0.2
CRLF3-202ENST00000577725 GRIN3BO60391 1043 aa13.79□□□□□ -0.2
CRLF3-202ENST00000577725 DNAJC5GQ8N7S2 189 aa13.79□□□□□ -0.2
CRLF3-202ENST00000577725 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
CRLF3-202ENST00000577725 TCP11L2Q8N4U5 519 aa13.78□□□□□ -0.2
CRLF3-202ENST00000577725 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
CRLF3-202ENST00000577725 EVA1CP58658 441 aa13.77□□□□□ -0.21
CRLF3-202ENST00000577725 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
CRLF3-202ENST00000577725 PMFBP1Q8TBY8 1022 aa13.77□□□□□ -0.21
CRLF3-202ENST00000577725 KIAA0232Q92628 1395 aa13.77□□□□□ -0.21
CRLF3-202ENST00000577725 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
CRLF3-202ENST00000577725 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
CRLF3-202ENST00000577725 KLHL34Q8N239 644 aa13.76□□□□□ -0.21
CRLF3-202ENST00000577725 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
CRLF3-202ENST00000577725 TRPM3Q9HCF6 1732 aaPredicted RBP13.74□□□□□ -0.21
CRLF3-202ENST00000577725 PER1O15534 1290 aaPredicted RBP13.74□□□□□ -0.21
CRLF3-202ENST00000577725 TXNRD1Q16881 649 aa13.74□□□□□ -0.21
CRLF3-202ENST00000577725 ALS2Q96Q42 1657 aa13.74□□□□□ -0.21
CRLF3-202ENST00000577725 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
CRLF3-202ENST00000577725 PTF1AQ7RTS3 328 aa13.73□□□□□ -0.21
CRLF3-202ENST00000577725 ZNF526Q8TF50 670 aaPredicted RBP13.73□□□□□ -0.21
CRLF3-202ENST00000577725 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
CRLF3-202ENST00000577725 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
CRLF3-202ENST00000577725 PRKRIP1Q9H875 184 aaPredicted RBP13.73□□□□□ -0.21
CRLF3-202ENST00000577725 PRR36Q9H6K5 1346 aa13.72□□□□□ -0.21
CRLF3-202ENST00000577725 YBX3P16989 372 aaKnown RBP eCLIP13.72□□□□□ -0.21
CRLF3-202ENST00000577725 CC2D1BQ5T0F9 858 aaKnown RBP13.72□□□□□ -0.21
CRLF3-202ENST00000577725 PEAK1Q9H792 1746 aa13.72□□□□□ -0.21
CRLF3-202ENST00000577725 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
CRLF3-202ENST00000577725 ADCY9O60503 1353 aa13.71□□□□□ -0.21
CRLF3-202ENST00000577725 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
CRLF3-202ENST00000577725 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.21
CRLF3-202ENST00000577725 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
CRLF3-202ENST00000577725 KNSTRNQ9Y448 316 aa13.71□□□□□ -0.21
CRLF3-202ENST00000577725 ATP7BP35670 1465 aa13.71□□□□□ -0.21
CRLF3-202ENST00000577725 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
CRLF3-202ENST00000577725 CD163L1Q9NR16 1453 aa13.7□□□□□ -0.22
CRLF3-202ENST00000577725 POLD1P28340 1107 aa13.7□□□□□ -0.22
CRLF3-202ENST00000577725 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
CRLF3-202ENST00000577725 NLGN2Q8NFZ4 835 aa13.7□□□□□ -0.22
CRLF3-202ENST00000577725 PPIP5K1Q6PFW1 1433 aa13.7□□□□□ -0.22
CRLF3-202ENST00000577725 RGPD8O14715 1765 aaPredicted RBP13.7□□□□□ -0.22
CRLF3-202ENST00000577725 PARP4Q9UKK3 1724 aaKnown RBP13.7□□□□□ -0.22
CRLF3-202ENST00000577725 A0A1W2PP64 1363 aa13.7□□□□□ -0.22
CRLF3-202ENST00000577725 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
CRLF3-202ENST00000577725 ANKRD36BQ8N2N9 1353 aa13.7□□□□□ -0.22
CRLF3-202ENST00000577725 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
CRLF3-202ENST00000577725 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
CRLF3-202ENST00000577725 JMYQ8N9B5 988 aa13.69□□□□□ -0.22
CRLF3-202ENST00000577725 AATKQ6ZMQ8 1374 aa13.69□□□□□ -0.22
CRLF3-202ENST00000577725 TOPAZ1Q8N9V7 1692 aa13.69□□□□□ -0.22
CRLF3-202ENST00000577725 KIF3CO14782 793 aa13.68□□□□□ -0.22
CRLF3-202ENST00000577725 CCER2I3L3R5 266 aa13.67□□□□□ -0.22
CRLF3-202ENST00000577725 DDB1Q16531 1140 aa13.67□□□□□ -0.22
CRLF3-202ENST00000577725 BCL9O00512 1426 aa13.66□□□□□ -0.22
CRLF3-202ENST00000577725 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
CRLF3-202ENST00000577725 KLRG1Q96E93 195 aa13.66□□□□□ -0.22
CRLF3-202ENST00000577725 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
CRLF3-202ENST00000577725 WWC3Q9ULE0 1092 aa13.66□□□□□ -0.22
CRLF3-202ENST00000577725 ITSN1Q15811 1721 aa13.66□□□□□ -0.22
CRLF3-202ENST00000577725 HDGFL2Q7Z4V5 671 aaPredicted RBP13.65□□□□□ -0.22
CRLF3-202ENST00000577725 TERF2IPQ9NYB0 399 aa13.65□□□□□ -0.22
CRLF3-202ENST00000577725 AKAP12Q02952 1782 aa13.65□□□□□ -0.22
CRLF3-202ENST00000577725 RALBP1Q15311 655 aa13.64□□□□□ -0.23
CRLF3-202ENST00000577725 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
CRLF3-202ENST00000577725 SBF2Q86WG5 1849 aa13.64□□□□□ -0.23
CRLF3-202ENST00000577725 MYBBP1AQ9BQG0 1328 aaKnown RBP13.63□□□□□ -0.23
CRLF3-202ENST00000577725 KIF20BQ96Q89 1820 aa13.62□□□□□ -0.23
CRLF3-202ENST00000577725 MON2Q7Z3U7 1717 aa13.62□□□□□ -0.23
CRLF3-202ENST00000577725 TOMM70O94826 608 aa13.62□□□□□ -0.23
CRLF3-202ENST00000577725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
CRLF3-202ENST00000577725 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms