RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 NFAT5O94916 1531 aa10.95□□□□□ -0.66
CCL13-202ENST00000577681 ABCC6O95255 1503 aa10.95□□□□□ -0.66
CCL13-202ENST00000577681 AATKQ6ZMQ8 1374 aa10.95□□□□□ -0.66
CCL13-202ENST00000577681 NLRP6P59044 892 aa10.95□□□□□ -0.66
CCL13-202ENST00000577681 NME9Q86XW9 330 aa10.95□□□□□ -0.66
CCL13-202ENST00000577681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.94□□□□□ -0.66
CCL13-202ENST00000577681 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
CCL13-202ENST00000577681 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
CCL13-202ENST00000577681 COL18A1P39060 1754 aa10.93□□□□□ -0.66
CCL13-202ENST00000577681 KIF24Q5T7B8 1368 aa10.93□□□□□ -0.66
CCL13-202ENST00000577681 GCP02774 474 aa10.93□□□□□ -0.66
CCL13-202ENST00000577681 DDX10Q13206 875 aaKnown RBP10.93□□□□□ -0.66
CCL13-202ENST00000577681 COG3Q96JB2 828 aa10.93□□□□□ -0.66
CCL13-202ENST00000577681 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
CCL13-202ENST00000577681 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
CCL13-202ENST00000577681 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
CCL13-202ENST00000577681 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
CCL13-202ENST00000577681 NWD2Q9ULI1 1742 aa10.92□□□□□ -0.66
CCL13-202ENST00000577681 LTN1O94822 1766 aa10.91□□□□□ -0.66
CCL13-202ENST00000577681 COL14A1Q05707 1796 aaKnown RBP10.91□□□□□ -0.66
CCL13-202ENST00000577681 ARHGEF25Q86VW2 580 aa10.91□□□□□ -0.66
CCL13-202ENST00000577681 GGNBP2Q9H3C7 697 aa10.91□□□□□ -0.66
CCL13-202ENST00000577681 LMO7Q8WWI1 1683 aa10.91□□□□□ -0.66
CCL13-202ENST00000577681 SMG6Q86US8 1419 aaKnown RBP10.91□□□□□ -0.66
CCL13-202ENST00000577681 EP400Q96L91 3159 aa10.91□□□□□ -0.66
CCL13-202ENST00000577681 PARD3Q8TEW0 1356 aa10.9□□□□□ -0.66
CCL13-202ENST00000577681 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
CCL13-202ENST00000577681 INSRP06213 1382 aa10.9□□□□□ -0.67
CCL13-202ENST00000577681 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.89□□□□□ -0.67
CCL13-202ENST00000577681 CCDC125Q86Z20 511 aa10.89□□□□□ -0.67
CCL13-202ENST00000577681 FNBP4Q8N3X1 1017 aaPredicted RBP10.89□□□□□ -0.67
CCL13-202ENST00000577681 CABLES1Q8TDN4 633 aa10.89□□□□□ -0.67
CCL13-202ENST00000577681 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
CCL13-202ENST00000577681 RTL1A6NKG5 1358 aa10.89□□□□□ -0.67
CCL13-202ENST00000577681 SLIT2O94813 1529 aa10.89□□□□□ -0.67
CCL13-202ENST00000577681 RALBP1Q15311 655 aa10.88□□□□□ -0.67
CCL13-202ENST00000577681 NUTM2GQ5VZR2 741 aa10.88□□□□□ -0.67
CCL13-202ENST00000577681 MORC1Q86VD1 984 aa10.88□□□□□ -0.67
CCL13-202ENST00000577681 KIAA0232Q92628 1395 aa10.88□□□□□ -0.67
CCL13-202ENST00000577681 ATRNO75882 1429 aa10.87□□□□□ -0.67
CCL13-202ENST00000577681 BLMP54132 1417 aaPredicted RBP10.87□□□□□ -0.67
CCL13-202ENST00000577681 FAM83GA6ND36 823 aa10.87□□□□□ -0.67
CCL13-202ENST00000577681 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
CCL13-202ENST00000577681 PLCH1Q4KWH8 1693 aa10.87□□□□□ -0.67
CCL13-202ENST00000577681 NRAPQ86VF7 1730 aa10.87□□□□□ -0.67
CCL13-202ENST00000577681 MAP3K19Q56UN5 1328 aa10.86□□□□□ -0.67
CCL13-202ENST00000577681 RGPD5Q99666 1765 aa10.86□□□□□ -0.67
CCL13-202ENST00000577681 IP6K1Q92551 441 aa10.86□□□□□ -0.67
CCL13-202ENST00000577681 POLKQ9UBT6 870 aa10.86□□□□□ -0.67
CCL13-202ENST00000577681 PEAK1Q9H792 1746 aa10.86□□□□□ -0.67
CCL13-202ENST00000577681 CAMTA1Q9Y6Y1 1673 aa10.85□□□□□ -0.67
CCL13-202ENST00000577681 SF3B2Q13435 895 aaKnown RBP10.85□□□□□ -0.67
CCL13-202ENST00000577681 AKT1S1Q96B36 256 aa10.85□□□□□ -0.67
CCL13-202ENST00000577681 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
CCL13-202ENST00000577681 FLT4P35916 1363 aa10.85□□□□□ -0.67
CCL13-202ENST00000577681 FAM208AQ9UK61 1670 aaKnown RBP10.85□□□□□ -0.67
CCL13-202ENST00000577681 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
CCL13-202ENST00000577681 ZC3H6P61129 1189 aaKnown RBP10.84□□□□□ -0.67
CCL13-202ENST00000577681 CC2D1BQ5T0F9 858 aaKnown RBP10.84□□□□□ -0.67
CCL13-202ENST00000577681 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
CCL13-202ENST00000577681 PRDM11Q9NQV5 511 aa10.84□□□□□ -0.67
CCL13-202ENST00000577681 BCL9LQ86UU0 1499 aa10.84□□□□□ -0.67
CCL13-202ENST00000577681 PPP2R1AP30153 589 aa10.83□□□□□ -0.68
CCL13-202ENST00000577681 HOXC9P31274 260 aa10.83□□□□□ -0.68
CCL13-202ENST00000577681 DEFB132Q7Z7B7 95 aa10.83□□□□□ -0.68
CCL13-202ENST00000577681 COL5A2P05997 1499 aaPredicted RBP10.82□□□□□ -0.68
CCL13-202ENST00000577681 FKBP8Q14318 412 aa10.82□□□□□ -0.68
CCL13-202ENST00000577681 AXIN2Q9Y2T1 843 aa10.82□□□□□ -0.68
CCL13-202ENST00000577681 NCAPD2Q15021 1401 aa10.82□□□□□ -0.68
CCL13-202ENST00000577681 FBLN1P23142 703 aa10.81□□□□□ -0.68
CCL13-202ENST00000577681 RRS1Q15050 365 aaKnown RBP10.81□□□□□ -0.68
CCL13-202ENST00000577681 UNC5CLQ8IV45 518 aa10.81□□□□□ -0.68
CCL13-202ENST00000577681 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
CCL13-202ENST00000577681 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
CCL13-202ENST00000577681 ERBB3P21860 1342 aa10.81□□□□□ -0.68
CCL13-202ENST00000577681 MYBBP1AQ9BQG0 1328 aaKnown RBP10.81□□□□□ -0.68
CCL13-202ENST00000577681 COL3A1P02461 1466 aaPredicted RBP10.81□□□□□ -0.68
CCL13-202ENST00000577681 PLEKHG2Q9H7P9 1386 aa10.8□□□□□ -0.68
CCL13-202ENST00000577681 AMPHP49418 695 aa10.8□□□□□ -0.68
CCL13-202ENST00000577681 MTHFSP49914 203 aa10.8□□□□□ -0.68
CCL13-202ENST00000577681 VPS72Q15906 364 aa10.8□□□□□ -0.68
CCL13-202ENST00000577681 BTG4Q9NY30 223 aa10.8□□□□□ -0.68
CCL13-202ENST00000577681 RGPD1P0DJD0 1748 aa10.8□□□□□ -0.68
CCL13-202ENST00000577681 WDR17Q8IZU2 1322 aa10.8□□□□□ -0.68
CCL13-202ENST00000577681 PSDA5PKW4 1024 aaPredicted RBP10.79□□□□□ -0.68
CCL13-202ENST00000577681 CHRNA2Q15822 529 aa10.79□□□□□ -0.68
CCL13-202ENST00000577681 HSP90AB2PQ58FF8 381 aa10.79□□□□□ -0.68
CCL13-202ENST00000577681 CRB1P82279 1406 aa10.78□□□□□ -0.68
CCL13-202ENST00000577681 ANP32CO43423 234 aa10.78□□□□□ -0.68
CCL13-202ENST00000577681 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
CCL13-202ENST00000577681 CARD10Q9BWT7 1032 aa10.78□□□□□ -0.68
CCL13-202ENST00000577681 THRAP3Q9Y2W1 955 aaKnown RBP10.78□□□□□ -0.68
CCL13-202ENST00000577681 CCDC9Q9Y3X0 531 aaKnown RBP10.78□□□□□ -0.68
CCL13-202ENST00000577681 SPATA31A5Q5VU36 1347 aa10.78□□□□□ -0.68
CCL13-202ENST00000577681 SPATA31A7Q8IWB4 1347 aa10.78□□□□□ -0.68
CCL13-202ENST00000577681 RGPD2P0DJD1 1756 aa10.77□□□□□ -0.68
CCL13-202ENST00000577681 A0A0G2JS52 829 aa10.77□□□□□ -0.69
CCL13-202ENST00000577681 SOX12O15370 315 aa10.77□□□□□ -0.69
CCL13-202ENST00000577681 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
CCL13-202ENST00000577681 IL13P35225 146 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms