RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TRAPPC8Q9Y2L5 1435 aa7.02□□□□□ -1.29
VAPA-203ENST00000577539 ADAMTS8Q9UP79 889 aa7.02□□□□□ -1.29
VAPA-203ENST00000577539 ERCC6L2Q5T890 1561 aa7.02□□□□□ -1.29
VAPA-203ENST00000577539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.02□□□□□ -1.29
VAPA-203ENST00000577539 TTC37Q6PGP7 1564 aa7.02□□□□□ -1.29
VAPA-203ENST00000577539 PARD3Q8TEW0 1356 aa7.02□□□□□ -1.29
VAPA-203ENST00000577539 CLCN6P51797 869 aa7.02□□□□□ -1.29
VAPA-203ENST00000577539 CDCA8Q53HL2 280 aa7.02□□□□□ -1.29
VAPA-203ENST00000577539 TBC1D2BQ9UPU7 963 aa7.02□□□□□ -1.29
VAPA-203ENST00000577539 RNF123Q5XPI4 1314 aa7.01□□□□□ -1.29
VAPA-203ENST00000577539 UCN2Q96RP3 112 aa7.01□□□□□ -1.29
VAPA-203ENST00000577539 KANK1Q14678 1352 aa7.01□□□□□ -1.29
VAPA-203ENST00000577539 PLCH2O75038 1416 aa7.01□□□□□ -1.29
VAPA-203ENST00000577539 CDC42BPBQ9Y5S2 1711 aa7.01□□□□□ -1.29
VAPA-203ENST00000577539 PREX2Q70Z35 1606 aa7.01□□□□□ -1.29
VAPA-203ENST00000577539 CARNS1A5YM72 827 aa7□□□□□ -1.29
VAPA-203ENST00000577539 TYW1BQ6NUM6 668 aa7□□□□□ -1.29
VAPA-203ENST00000577539 GPR153Q6NV75 609 aa7□□□□□ -1.29
VAPA-203ENST00000577539 CCDC146Q8IYE0 955 aa7□□□□□ -1.29
VAPA-203ENST00000577539 POLR1AO95602 1720 aaPredicted RBP7□□□□□ -1.29
VAPA-203ENST00000577539 GABBR2O75899 941 aa7□□□□□ -1.29
VAPA-203ENST00000577539 GLMNQ92990 594 aa7□□□□□ -1.29
VAPA-203ENST00000577539 WASHC2CQ9Y4E1 1318 aa7□□□□□ -1.29
VAPA-203ENST00000577539 ABCC2Q92887 1545 aa7□□□□□ -1.29
VAPA-203ENST00000577539 PPP2R1AP30153 589 aa7□□□□□ -1.29
VAPA-203ENST00000577539 RIC3Q7Z5B4 369 aa7□□□□□ -1.29
VAPA-203ENST00000577539 CRBNQ96SW2 442 aa7□□□□□ -1.29
VAPA-203ENST00000577539 PCDHGC3Q9UN70 934 aa7□□□□□ -1.29
VAPA-203ENST00000577539 GPRASP1Q5JY77 1395 aa7□□□□□ -1.29
VAPA-203ENST00000577539 TMEM88BA6NKF7 163 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 TNNT2P45379 298 aaPredicted RBP6.99□□□□□ -1.29
VAPA-203ENST00000577539 DUOX2Q9NRD8 1548 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 OATP04181 439 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 GJA5P36382 358 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 PRSS12P56730 875 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 GGT6Q6P531 493 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 L3MBTL3Q96JM7 780 aaPredicted RBP6.99□□□□□ -1.29
VAPA-203ENST00000577539 SCAPERQ9BY12 1400 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 COL17A1Q9UMD9 1497 aaPredicted RBP6.99□□□□□ -1.29
VAPA-203ENST00000577539 MOXD2PA6NHM9 499 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 NDUFV2P19404 249 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 SKAP1Q86WV1 359 aa6.99□□□□□ -1.29
VAPA-203ENST00000577539 CHD1O14646 1710 aa6.98□□□□□ -1.29
VAPA-203ENST00000577539 PUS7Q96PZ0 661 aaKnown RBP6.98□□□□□ -1.29
VAPA-203ENST00000577539 KCTD17Q8N5Z5 321 aa6.98□□□□□ -1.29
VAPA-203ENST00000577539 MTMR7Q9Y216 660 aa6.98□□□□□ -1.29
VAPA-203ENST00000577539 PLCG2P16885 1265 aa6.97□□□□□ -1.29
VAPA-203ENST00000577539 FBXW7Q969H0 707 aa6.97□□□□□ -1.29
VAPA-203ENST00000577539 IPO9Q96P70 1041 aaKnown RBP6.97□□□□□ -1.29
VAPA-203ENST00000577539 TCERG1O14776 1098 aaKnown RBP6.97□□□□□ -1.29
VAPA-203ENST00000577539 TRAK1Q9UPV9 953 aa6.97□□□□□ -1.29
VAPA-203ENST00000577539 APAF1O14727 1248 aa6.97□□□□□ -1.29
VAPA-203ENST00000577539 NUTM2DQ5VT03 806 aaPredicted RBP6.97□□□□□ -1.29
VAPA-203ENST00000577539 C20orf194Q5TEA3 1177 aa6.96□□□□□ -1.29
VAPA-203ENST00000577539 ZNF330Q9Y3S2 320 aaPredicted RBP6.96□□□□□ -1.29
VAPA-203ENST00000577539 TRPM1Q7Z4N2 1603 aa6.96□□□□□ -1.29
VAPA-203ENST00000577539 ADGRF5Q8IZF2 1346 aa6.96□□□□□ -1.3
VAPA-203ENST00000577539 RCCD1A6NED2 376 aa6.96□□□□□ -1.3
VAPA-203ENST00000577539 NOM1Q5C9Z4 860 aaKnown RBP6.96□□□□□ -1.3
VAPA-203ENST00000577539 EPS8L1Q8TE68 723 aa6.96□□□□□ -1.3
VAPA-203ENST00000577539 EIF3AQ14152 1382 aaKnown RBP6.96□□□□□ -1.3
VAPA-203ENST00000577539 CANXP27824 592 aaKnown RBP6.96□□□□□ -1.3
VAPA-203ENST00000577539 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.96□□□□□ -1.3
VAPA-203ENST00000577539 MYO5CQ9NQX4 1742 aa6.96□□□□□ -1.3
VAPA-203ENST00000577539 POTEB2H3BUK9 544 aa6.95□□□□□ -1.3
VAPA-203ENST00000577539 HLA-CQ95604 372 aa6.95□□□□□ -1.3
VAPA-203ENST00000577539 TMEM259Q4ZIN3 620 aa6.95□□□□□ -1.3
VAPA-203ENST00000577539 ALG2Q9H553 416 aa6.95□□□□□ -1.3
VAPA-203ENST00000577539 LAS1LQ9Y4W2 734 aaKnown RBP6.95□□□□□ -1.3
VAPA-203ENST00000577539 UNC13BO14795 1591 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 MAST1Q9Y2H9 1570 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 RGS3P49796 1198 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 SAFB2Q14151 953 aaKnown RBP eCLIP6.94□□□□□ -1.3
VAPA-203ENST00000577539 TMEM132EQ6IEE7 984 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 CERKQ8TCT0 537 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 BCL11AQ9H165 835 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 TMEM134Q9H6X4 195 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 PRDM15P57071 1507 aaPredicted RBP6.94□□□□□ -1.3
VAPA-203ENST00000577539 STAC3Q96MF2 364 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 FANCAO15360 1455 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 MAGI2Q86UL8 1455 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 SCAF11Q99590 1463 aaKnown RBP6.94□□□□□ -1.3
VAPA-203ENST00000577539 DEKP35659 375 aaKnown RBP6.94□□□□□ -1.3
VAPA-203ENST00000577539 MORC1Q86VD1 984 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 IGSF5Q9NSI5 407 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 SLAIN2Q9P270 581 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 IQGAP3Q86VI3 1631 aa6.94□□□□□ -1.3
VAPA-203ENST00000577539 CABLES1Q8TDN4 633 aa6.93□□□□□ -1.3
VAPA-203ENST00000577539 PLEKHH1Q9ULM0 1364 aa6.93□□□□□ -1.3
VAPA-203ENST00000577539 EIF2AK4Q9P2K8 1649 aaKnown RBP6.93□□□□□ -1.3
VAPA-203ENST00000577539 ATP10AO60312 1499 aa6.93□□□□□ -1.3
VAPA-203ENST00000577539 DUSP27Q5VZP5 1158 aa6.93□□□□□ -1.3
VAPA-203ENST00000577539 RRP7AQ9Y3A4 280 aaKnown RBP6.93□□□□□ -1.3
VAPA-203ENST00000577539 PLXNC1O60486 1568 aa6.93□□□□□ -1.3
VAPA-203ENST00000577539 ADGRL1O94910 1474 aa6.93□□□□□ -1.3
VAPA-203ENST00000577539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.93□□□□□ -1.3
VAPA-203ENST00000577539 ZDHHC16Q969W1 377 aa6.93□□□□□ -1.3
VAPA-203ENST00000577539 ABCC1P33527 1531 aa6.93□□□□□ -1.3
VAPA-203ENST00000577539 SLC12A5Q9H2X9 1139 aa6.92□□□□□ -1.3
VAPA-203ENST00000577539 ZCCHC11Q5TAX3 1644 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms