RNA–Protein interactions for RNA: ENST00000577028.5

EDC4-213, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 4

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-213ENST00000577028 USP31Q70CQ4 1352 aa24.36■■□□□ 1.49
EDC4-213ENST00000577028 CRB1P82279 1406 aa24.35■■□□□ 1.49
EDC4-213ENST00000577028 RGPD1P0DJD0 1748 aa24.35■■□□□ 1.49
EDC4-213ENST00000577028 PARP4Q9UKK3 1724 aaKnown RBP24.35■■□□□ 1.49
EDC4-213ENST00000577028 ANKRD36BQ8N2N9 1353 aa24.35■■□□□ 1.49
EDC4-213ENST00000577028 BLMP54132 1417 aaPredicted RBP24.35■■□□□ 1.49
EDC4-213ENST00000577028 FAM182BQ5T319 152 aa24.34■■□□□ 1.49
EDC4-213ENST00000577028 ARHGEF25Q86VW2 580 aa24.34■■□□□ 1.49
EDC4-213ENST00000577028 SF3B2Q13435 895 aaKnown RBP24.33■■□□□ 1.49
EDC4-213ENST00000577028 TOM1L2Q6ZVM7 507 aa24.33■■□□□ 1.49
EDC4-213ENST00000577028 TCP11L2Q8N4U5 519 aa24.33■■□□□ 1.49
EDC4-213ENST00000577028 POLR3GLQ9BT43 218 aa24.33■■□□□ 1.49
EDC4-213ENST00000577028 ABCC6O95255 1503 aa24.33■■□□□ 1.49
EDC4-213ENST00000577028 OVOS2A0A0J9YW53 1432 aa24.33■■□□□ 1.49
EDC4-213ENST00000577028 OVOS2Q6IE36 1432 aa24.33■■□□□ 1.49
EDC4-213ENST00000577028 CSB-PGBD3P0DP91 1061 aa24.32■■□□□ 1.48
EDC4-213ENST00000577028 AXIN2Q9Y2T1 843 aa24.32■■□□□ 1.48
EDC4-213ENST00000577028 CCDC125Q86Z20 511 aa24.31■■□□□ 1.48
EDC4-213ENST00000577028 LRRC37A3O60309 1634 aa24.31■■□□□ 1.48
EDC4-213ENST00000577028 TNS1Q9HBL0 1735 aaKnown RBP24.3■■□□□ 1.48
EDC4-213ENST00000577028 EIF4G2P78344 907 aaKnown RBP eCLIP24.29■■□□□ 1.48
EDC4-213ENST00000577028 BARGINQ6ZT62 677 aa24.29■■□□□ 1.48
EDC4-213ENST00000577028 WDR17Q8IZU2 1322 aa24.29■■□□□ 1.48
EDC4-213ENST00000577028 COG3Q96JB2 828 aa24.28■■□□□ 1.48
EDC4-213ENST00000577028 THRAP3Q9Y2W1 955 aaKnown RBP24.27■■□□□ 1.48
EDC4-213ENST00000577028 HSPA5P11021 654 aaKnown RBP24.26■■□□□ 1.47
EDC4-213ENST00000577028 PDE3BQ13370 1112 aa24.26■■□□□ 1.47
EDC4-213ENST00000577028 DEFB132Q7Z7B7 95 aa24.24■■□□□ 1.47
EDC4-213ENST00000577028 FAM208AQ9UK61 1670 aaKnown RBP24.24■■□□□ 1.47
EDC4-213ENST00000577028 GGNBP2Q9H3C7 697 aa24.23■■□□□ 1.47
EDC4-213ENST00000577028 NSD3Q9BZ95 1437 aa24.23■■□□□ 1.47
EDC4-213ENST00000577028 RGPD2P0DJD1 1756 aa24.21■■□□□ 1.47
EDC4-213ENST00000577028 ERBB3P21860 1342 aa24.19■■□□□ 1.46
EDC4-213ENST00000577028 BAG6P46379 1132 aa24.19■■□□□ 1.46
EDC4-213ENST00000577028 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
EDC4-213ENST00000577028 NLRP2Q9NX02 1062 aa24.19■■□□□ 1.46
EDC4-213ENST00000577028 SBF2Q86WG5 1849 aa24.19■■□□□ 1.46
EDC4-213ENST00000577028 DDB1Q16531 1140 aa24.18■■□□□ 1.46
EDC4-213ENST00000577028 ANKRD24Q8TF21 1146 aa24.18■■□□□ 1.46
EDC4-213ENST00000577028 CARD10Q9BWT7 1032 aa24.18■■□□□ 1.46
EDC4-213ENST00000577028 CCDC7Q96M83 1385 aa24.17■■□□□ 1.46
EDC4-213ENST00000577028 FYB1O15117 783 aa24.17■■□□□ 1.46
EDC4-213ENST00000577028 TRIM37O94972 964 aa24.17■■□□□ 1.46
EDC4-213ENST00000577028 LTV1Q96GA3 475 aaPredicted RBP24.17■■□□□ 1.46
EDC4-213ENST00000577028 PEAK1Q9H792 1746 aa24.17■■□□□ 1.46
EDC4-213ENST00000577028 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
EDC4-213ENST00000577028 FBLN1P23142 703 aa24.16■■□□□ 1.46
EDC4-213ENST00000577028 AMPHP49418 695 aa24.16■■□□□ 1.46
EDC4-213ENST00000577028 MAP3K19Q56UN5 1328 aa24.15■■□□□ 1.46
EDC4-213ENST00000577028 OVOS2A0A0G2JMS6 1433 aa24.15■■□□□ 1.46
EDC4-213ENST00000577028 CARD14Q9BXL6 1004 aa24.14■■□□□ 1.45
EDC4-213ENST00000577028 DISP2A7MBM2 1401 aa24.13■■□□□ 1.45
EDC4-213ENST00000577028 RRS1Q15050 365 aaKnown RBP24.13■■□□□ 1.45
EDC4-213ENST00000577028 IP6K1Q92551 441 aa24.13■■□□□ 1.45
EDC4-213ENST00000577028 CDCA7Q9BWT1 371 aaPredicted RBP24.13■■□□□ 1.45
EDC4-213ENST00000577028 EN1Q05925 392 aaPredicted RBP24.12■■□□□ 1.45
EDC4-213ENST00000577028 MAP2P11137 1827 aaKnown RBP24.12■■□□□ 1.45
EDC4-213ENST00000577028 HOXC9P31274 260 aa24.11■■□□□ 1.45
EDC4-213ENST00000577028 KAT6BQ8WYB5 2073 aa24.11■■□□□ 1.45
EDC4-213ENST00000577028 TNS2Q63HR2 1409 aa24.1■■□□□ 1.45
EDC4-213ENST00000577028 RTL1A6NKG5 1358 aa24.1■■□□□ 1.45
EDC4-213ENST00000577028 CGNL1Q0VF96 1302 aa24.09■■□□□ 1.45
EDC4-213ENST00000577028 APBA3O96018 575 aa24.08■■□□□ 1.45
EDC4-213ENST00000577028 RREB1Q92766 1687 aa24.08■■□□□ 1.44
EDC4-213ENST00000577028 SMG6Q86US8 1419 aaKnown RBP24.07■■□□□ 1.44
EDC4-213ENST00000577028 EXOC5O00471 708 aa24.06■■□□□ 1.44
EDC4-213ENST00000577028 IL2RBP14784 551 aa24.06■■□□□ 1.44
EDC4-213ENST00000577028 NUP188Q5SRE5 1749 aa24.05■■□□□ 1.44
EDC4-213ENST00000577028 MARCH10Q8NA82 808 aaPredicted RBP24.05■■□□□ 1.44
EDC4-213ENST00000577028 EZH2Q15910 746 aaKnown RBP24.04■■□□□ 1.44
EDC4-213ENST00000577028 C11orf95C9JLR9 678 aaPredicted RBP24.03■■□□□ 1.44
EDC4-213ENST00000577028 PANK3Q9H999 370 aa24.03■■□□□ 1.44
EDC4-213ENST00000577028 FLT4P35916 1363 aa24.03■■□□□ 1.44
EDC4-213ENST00000577028 RGPD3A6NKT7 1758 aaPredicted RBP24.02■■□□□ 1.44
EDC4-213ENST00000577028 RGPD4Q7Z3J3 1758 aa24.02■■□□□ 1.44
EDC4-213ENST00000577028 PPM1GO15355 546 aaPredicted RBP24.02■■□□□ 1.44
EDC4-213ENST00000577028 NHSQ6T4R5 1651 aa24.02■■□□□ 1.44
EDC4-213ENST00000577028 SHANK3Q9BYB0 1731 aa24.01■■□□□ 1.43
EDC4-213ENST00000577028 TNNT2P45379 298 aaPredicted RBP24■■□□□ 1.43
EDC4-213ENST00000577028 EMILIN1Q9Y6C2 1016 aa24■■□□□ 1.43
EDC4-213ENST00000577028 PSDA5PKW4 1024 aaPredicted RBP23.99■■□□□ 1.43
EDC4-213ENST00000577028 USHBP1Q8N6Y0 703 aa23.99■■□□□ 1.43
EDC4-213ENST00000577028 HSP90AB2PQ58FF8 381 aa23.98■■□□□ 1.43
EDC4-213ENST00000577028 KIF7Q2M1P5 1343 aa23.98■■□□□ 1.43
EDC4-213ENST00000577028 INSRP06213 1382 aa23.98■■□□□ 1.43
EDC4-213ENST00000577028 DOT1LQ8TEK3 1739 aa23.97■■□□□ 1.43
EDC4-213ENST00000577028 PARD3Q8TEW0 1356 aa23.97■■□□□ 1.43
EDC4-213ENST00000577028 CAMKK2Q96RR4 588 aa23.97■■□□□ 1.43
EDC4-213ENST00000577028 BTAF1O14981 1849 aa23.96■■□□□ 1.43
EDC4-213ENST00000577028 MEGF6O75095 1541 aa23.96■■□□□ 1.43
EDC4-213ENST00000577028 KIF24Q5T7B8 1368 aa23.96■■□□□ 1.43
EDC4-213ENST00000577028 NBPF6Q5VWK0 638 aa23.94■■□□□ 1.42
EDC4-213ENST00000577028 PTF1AQ7RTS3 328 aa23.94■■□□□ 1.42
EDC4-213ENST00000577028 DDX54Q8TDD1 881 aaKnown RBP23.94■■□□□ 1.42
EDC4-213ENST00000577028 ACSBG1Q96GR2 724 aa23.94■■□□□ 1.42
EDC4-213ENST00000577028 NBPF4Q96M43 638 aa23.94■■□□□ 1.42
EDC4-213ENST00000577028 BCL9O00512 1426 aa23.93■■□□□ 1.42
EDC4-213ENST00000577028 BCL11BQ9C0K0 894 aaPredicted RBP23.93■■□□□ 1.42
EDC4-213ENST00000577028 NSD2O96028 1365 aa23.92■■□□□ 1.42
EDC4-213ENST00000577028 R3HDM1Q15032 1099 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms