RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 EVC2Q86UK5 1308 aa18.81■□□□□ 0.6
TSR1-205ENST00000576202 AXIN2Q9Y2T1 843 aa18.81■□□□□ 0.6
TSR1-205ENST00000576202 TRPM1Q7Z4N2 1603 aa18.81■□□□□ 0.6
TSR1-205ENST00000576202 CDCA7Q9BWT1 371 aaPredicted RBP18.8■□□□□ 0.6
TSR1-205ENST00000576202 BCL11BQ9C0K0 894 aaPredicted RBP18.8■□□□□ 0.6
TSR1-205ENST00000576202 AKAP12Q02952 1782 aa18.79■□□□□ 0.6
TSR1-205ENST00000576202 NINLQ9Y2I6 1382 aa18.79■□□□□ 0.6
TSR1-205ENST00000576202 BCL9O00512 1426 aa18.78■□□□□ 0.6
TSR1-205ENST00000576202 YY1P25490 414 aa18.78■□□□□ 0.6
TSR1-205ENST00000576202 ARHGEF25Q86VW2 580 aa18.78■□□□□ 0.6
TSR1-205ENST00000576202 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
TSR1-205ENST00000576202 L3MBTL2Q969R5 705 aa18.78■□□□□ 0.6
TSR1-205ENST00000576202 ZNF692Q9BU19 519 aaPredicted RBP18.78■□□□□ 0.6
TSR1-205ENST00000576202 CASZ1Q86V15 1759 aa18.78■□□□□ 0.6
TSR1-205ENST00000576202 TTC21BQ7Z4L5 1316 aa18.77■□□□□ 0.6
TSR1-205ENST00000576202 PTF1AQ7RTS3 328 aa18.77■□□□□ 0.6
TSR1-205ENST00000576202 MARCH10Q8NA82 808 aaPredicted RBP18.77■□□□□ 0.6
TSR1-205ENST00000576202 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.6
TSR1-205ENST00000576202 RGPD5Q99666 1765 aa18.77■□□□□ 0.6
TSR1-205ENST00000576202 TTC21AQ8NDW8 1320 aa18.75■□□□□ 0.59
TSR1-205ENST00000576202 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
TSR1-205ENST00000576202 CARD10Q9BWT7 1032 aa18.75■□□□□ 0.59
TSR1-205ENST00000576202 SOX12O15370 315 aa18.74■□□□□ 0.59
TSR1-205ENST00000576202 CSB-PGBD3P0DP91 1061 aa18.74■□□□□ 0.59
TSR1-205ENST00000576202 NFAT5O94916 1531 aa18.74■□□□□ 0.59
TSR1-205ENST00000576202 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
TSR1-205ENST00000576202 PROM2Q8N271 834 aa18.73■□□□□ 0.59
TSR1-205ENST00000576202 ABCC6O95255 1503 aa18.73■□□□□ 0.59
TSR1-205ENST00000576202 KTN1Q86UP2 1357 aaKnown RBP18.71■□□□□ 0.59
TSR1-205ENST00000576202 CCDC7Q96M83 1385 aa18.71■□□□□ 0.59
TSR1-205ENST00000576202 EXOC5O00471 708 aa18.71■□□□□ 0.59
TSR1-205ENST00000576202 PDGFDQ9GZP0 370 aaPredicted RBP18.71■□□□□ 0.59
TSR1-205ENST00000576202 MON2Q7Z3U7 1717 aa18.7■□□□□ 0.58
TSR1-205ENST00000576202 TNS2Q63HR2 1409 aa18.69■□□□□ 0.58
TSR1-205ENST00000576202 TXNRD1Q16881 649 aa18.69■□□□□ 0.58
TSR1-205ENST00000576202 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
TSR1-205ENST00000576202 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
TSR1-205ENST00000576202 MYOM1P52179 1685 aa18.69■□□□□ 0.58
TSR1-205ENST00000576202 ZBTB7AO95365 584 aa18.68■□□□□ 0.58
TSR1-205ENST00000576202 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
TSR1-205ENST00000576202 USP54Q70EL1 1684 aa18.67■□□□□ 0.58
TSR1-205ENST00000576202 PTGER2P43116 358 aa18.66■□□□□ 0.58
TSR1-205ENST00000576202 SLC15A2Q16348 729 aa18.66■□□□□ 0.58
TSR1-205ENST00000576202 USP31Q70CQ4 1352 aa18.66■□□□□ 0.58
TSR1-205ENST00000576202 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
TSR1-205ENST00000576202 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
TSR1-205ENST00000576202 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.57
TSR1-205ENST00000576202 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
TSR1-205ENST00000576202 ERBB3P21860 1342 aa18.64■□□□□ 0.57
TSR1-205ENST00000576202 LTN1O94822 1766 aa18.63■□□□□ 0.57
TSR1-205ENST00000576202 CD163L1Q9NR16 1453 aa18.63■□□□□ 0.57
TSR1-205ENST00000576202 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
TSR1-205ENST00000576202 NME9Q86XW9 330 aa18.61■□□□□ 0.57
TSR1-205ENST00000576202 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
TSR1-205ENST00000576202 MTFR1LQ9H019 292 aa18.61■□□□□ 0.57
TSR1-205ENST00000576202 PAPPAQ13219 1627 aa18.6■□□□□ 0.57
TSR1-205ENST00000576202 IL2RBP14784 551 aa18.6■□□□□ 0.57
TSR1-205ENST00000576202 FHDC1Q9C0D6 1143 aaPredicted RBP18.6■□□□□ 0.57
TSR1-205ENST00000576202 BTAF1O14981 1849 aa18.58■□□□□ 0.57
TSR1-205ENST00000576202 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.56
TSR1-205ENST00000576202 TMC1Q8TDI8 760 aa18.58■□□□□ 0.56
TSR1-205ENST00000576202 ANKRD24Q8TF21 1146 aa18.58■□□□□ 0.56
TSR1-205ENST00000576202 SGIP1Q9BQI5 828 aa18.58■□□□□ 0.56
TSR1-205ENST00000576202 SYT17Q9BSW7 474 aa18.58■□□□□ 0.56
TSR1-205ENST00000576202 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
TSR1-205ENST00000576202 EDC4Q6P2E9 1401 aaKnown RBP18.57■□□□□ 0.56
TSR1-205ENST00000576202 UTRNP46939 3433 aa18.56■□□□□ 0.56
TSR1-205ENST00000576202 SLC12A5Q9H2X9 1139 aa18.55■□□□□ 0.56
TSR1-205ENST00000576202 ARXQ96QS3 562 aa18.54■□□□□ 0.56
TSR1-205ENST00000576202 TERF2IPQ9NYB0 399 aa18.54■□□□□ 0.56
TSR1-205ENST00000576202 A0A1W2PP64 1363 aa18.54■□□□□ 0.56
TSR1-205ENST00000576202 FAM208AQ9UK61 1670 aaKnown RBP18.53■□□□□ 0.56
TSR1-205ENST00000576202 ZNF827Q17R98 1081 aa18.52■□□□□ 0.56
TSR1-205ENST00000576202 ZNF784Q8NCA9 323 aaPredicted RBP18.52■□□□□ 0.56
TSR1-205ENST00000576202 MAP3K5Q99683 1374 aa18.52■□□□□ 0.55
TSR1-205ENST00000576202 IP6K1Q92551 441 aa18.51■□□□□ 0.55
TSR1-205ENST00000576202 LRRC4BQ9NT99 713 aa18.51■□□□□ 0.55
TSR1-205ENST00000576202 PUS7Q96PZ0 661 aaKnown RBP18.5■□□□□ 0.55
TSR1-205ENST00000576202 QSER1Q2KHR3 1735 aa18.49■□□□□ 0.55
TSR1-205ENST00000576202 CHD4Q14839 1912 aa18.49■□□□□ 0.55
TSR1-205ENST00000576202 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
TSR1-205ENST00000576202 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
TSR1-205ENST00000576202 KAT6BQ8WYB5 2073 aa18.48■□□□□ 0.55
TSR1-205ENST00000576202 SLC27A3Q5K4L6 730 aa18.48■□□□□ 0.55
TSR1-205ENST00000576202 LTV1Q96GA3 475 aaPredicted RBP18.47■□□□□ 0.55
TSR1-205ENST00000576202 SLC16A10Q8TF71 515 aa18.46■□□□□ 0.55
TSR1-205ENST00000576202 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
TSR1-205ENST00000576202 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
TSR1-205ENST00000576202 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
TSR1-205ENST00000576202 PNPLA7Q6ZV29 1317 aa18.45■□□□□ 0.54
TSR1-205ENST00000576202 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
TSR1-205ENST00000576202 POLD1P28340 1107 aa18.44■□□□□ 0.54
TSR1-205ENST00000576202 SYTL4Q96C24 671 aaPredicted RBP18.44■□□□□ 0.54
TSR1-205ENST00000576202 COG3Q96JB2 828 aa18.44■□□□□ 0.54
TSR1-205ENST00000576202 MAP3K19Q56UN5 1328 aa18.44■□□□□ 0.54
TSR1-205ENST00000576202 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
TSR1-205ENST00000576202 LY75O60449 1722 aa18.43■□□□□ 0.54
TSR1-205ENST00000576202 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
TSR1-205ENST00000576202 HOXC9P31274 260 aa18.43■□□□□ 0.54
TSR1-205ENST00000576202 AMPHP49418 695 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms