RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 GCOM1H8Y6P7 765 aaPredicted RBP11.79□□□□□ -0.52
USP6-205ENST00000574788 MYZAPP0CAP1 466 aa11.79□□□□□ -0.52
USP6-205ENST00000574788 SRCIN1Q9C0H9 1055 aa11.79□□□□□ -0.52
USP6-205ENST00000574788 MATR3P43243 847 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP6-205ENST00000574788 PHF23Q9BUL5 403 aaPredicted RBP11.79□□□□□ -0.52
USP6-205ENST00000574788 SOGA1O94964 1423 aa11.79□□□□□ -0.52
USP6-205ENST00000574788 ME1P48163 572 aa11.79□□□□□ -0.52
USP6-205ENST00000574788 TNMDQ9H2S6 317 aa11.78□□□□□ -0.52
USP6-205ENST00000574788 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
USP6-205ENST00000574788 KIAA1328Q86T90 577 aa11.78□□□□□ -0.52
USP6-205ENST00000574788 DDX12PQ92771 950 aa11.78□□□□□ -0.52
USP6-205ENST00000574788 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
USP6-205ENST00000574788 CYP46A1Q9Y6A2 500 aa11.78□□□□□ -0.52
USP6-205ENST00000574788 ZHX3Q9H4I2 956 aa11.78□□□□□ -0.52
USP6-205ENST00000574788 SHTN1A0MZ66 631 aa11.77□□□□□ -0.52
USP6-205ENST00000574788 ATP2B2Q01814 1243 aa11.77□□□□□ -0.52
USP6-205ENST00000574788 CEP57L1Q8IYX8 460 aa11.77□□□□□ -0.52
USP6-205ENST00000574788 DDX23Q9BUQ8 820 aaKnown RBP11.77□□□□□ -0.53
USP6-205ENST00000574788 PLIN1O60240 522 aa11.77□□□□□ -0.53
USP6-205ENST00000574788 LNPKQ9C0E8 428 aa11.77□□□□□ -0.53
USP6-205ENST00000574788 CNNM1Q9NRU3 951 aa11.77□□□□□ -0.53
USP6-205ENST00000574788 HNRNPMP52272 730 aaKnown RBP eCLIP11.77□□□□□ -0.53
USP6-205ENST00000574788 KRT32Q14532 448 aa11.77□□□□□ -0.53
USP6-205ENST00000574788 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
USP6-205ENST00000574788 MICALCLQ6ZW33 695 aa11.76□□□□□ -0.53
USP6-205ENST00000574788 HMGB1P1B2RPK0 211 aaPredicted RBP11.76□□□□□ -0.53
USP6-205ENST00000574788 TTC39AQ5SRH9 613 aa11.76□□□□□ -0.53
USP6-205ENST00000574788 CUX1P39880 1505 aa11.76□□□□□ -0.53
USP6-205ENST00000574788 SREK1Q8WXA9 508 aaKnown RBP11.76□□□□□ -0.53
USP6-205ENST00000574788 ARHGAP29Q52LW3 1261 aa11.76□□□□□ -0.53
USP6-205ENST00000574788 RAB34Q9BZG1 259 aa11.76□□□□□ -0.53
USP6-205ENST00000574788 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
USP6-205ENST00000574788 SMC1AQ14683 1233 aaKnown RBP11.76□□□□□ -0.53
USP6-205ENST00000574788 TRAK2O60296 914 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 GNAI2P04899 355 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 ATP2B1P20020 1258 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 MTMR7Q9Y216 660 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 PABPN1LA6NDY0 278 aaKnown RBP11.75□□□□□ -0.53
USP6-205ENST00000574788 ZNF76P36508 570 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
USP6-205ENST00000574788 APAF1O14727 1248 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 NEK4P51957 841 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 GCC1Q96CN9 775 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.75□□□□□ -0.53
USP6-205ENST00000574788 V9GYY5 206 aaPredicted RBP11.75□□□□□ -0.53
USP6-205ENST00000574788 NUTM2DQ5VT03 806 aaPredicted RBP11.75□□□□□ -0.53
USP6-205ENST00000574788 LUZP1Q86V48 1076 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 TMEM87AQ8NBN3 555 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 MPHOSPH8Q99549 860 aa11.75□□□□□ -0.53
USP6-205ENST00000574788 FERP16591 822 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 AIMP1Q12904 312 aaKnown RBP11.74□□□□□ -0.53
USP6-205ENST00000574788 SPA17Q15506 151 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 TMCO3Q6UWJ1 677 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
USP6-205ENST00000574788 CETN1Q12798 172 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 PLEKHO1Q53GL0 409 aaPredicted RBP11.74□□□□□ -0.53
USP6-205ENST00000574788 HOMER2Q9NSB8 354 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 KIF20AO95235 890 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 SSR1P43307 286 aaKnown RBP11.74□□□□□ -0.53
USP6-205ENST00000574788 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 LRRC45Q96CN5 670 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 UBAC1Q9BSL1 405 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 NLRP2Q9NX02 1062 aa11.74□□□□□ -0.53
USP6-205ENST00000574788 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
USP6-205ENST00000574788 PPM1FP49593 454 aaPredicted RBP11.73□□□□□ -0.53
USP6-205ENST00000574788 CCT4P50991 539 aaKnown RBP11.73□□□□□ -0.53
USP6-205ENST00000574788 RNF214Q8ND24 703 aa11.73□□□□□ -0.53
USP6-205ENST00000574788 GSTTP1A0A1W2PQM5 241 aa11.73□□□□□ -0.53
USP6-205ENST00000574788 SEC63Q9UGP8 760 aaKnown RBP11.73□□□□□ -0.53
USP6-205ENST00000574788 SLC4A3P48751 1232 aa11.73□□□□□ -0.53
USP6-205ENST00000574788 ZSCAN12O43309 604 aa11.73□□□□□ -0.53
USP6-205ENST00000574788 PRKRIP1Q9H875 184 aaPredicted RBP11.73□□□□□ -0.53
USP6-205ENST00000574788 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
USP6-205ENST00000574788 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
USP6-205ENST00000574788 FIBPO43427 364 aa11.73□□□□□ -0.53
USP6-205ENST00000574788 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
USP6-205ENST00000574788 CCDC102AQ96A19 550 aa11.73□□□□□ -0.53
USP6-205ENST00000574788 C6orf163Q5TEZ5 329 aa11.72□□□□□ -0.53
USP6-205ENST00000574788 PNISRQ8TF01 805 aaKnown RBP11.72□□□□□ -0.53
USP6-205ENST00000574788 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
USP6-205ENST00000574788 SSX2IPQ9Y2D8 614 aa11.72□□□□□ -0.53
USP6-205ENST00000574788 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
USP6-205ENST00000574788 UBXN4Q92575 508 aa11.72□□□□□ -0.53
USP6-205ENST00000574788 FKBP15Q5T1M5 1219 aa11.72□□□□□ -0.53
USP6-205ENST00000574788 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
USP6-205ENST00000574788 GON4LQ3T8J9 2241 aa11.72□□□□□ -0.53
USP6-205ENST00000574788 DRC1Q96MC2 740 aa11.72□□□□□ -0.53
USP6-205ENST00000574788 DNAJC2Q99543 621 aaKnown RBP11.71□□□□□ -0.53
USP6-205ENST00000574788 TSG101Q99816 390 aa11.71□□□□□ -0.53
USP6-205ENST00000574788 RAPGEF2Q9Y4G8 1499 aa11.71□□□□□ -0.53
USP6-205ENST00000574788 HMGB1P09429 215 aaKnown RBP11.71□□□□□ -0.53
USP6-205ENST00000574788 EXOC6Q8TAG9 804 aa11.71□□□□□ -0.53
USP6-205ENST00000574788 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.54
USP6-205ENST00000574788 KIF5CO60282 957 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 CCDC175P0C221 793 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 IFFO1Q0D2I5 559 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 SPECC1LQ69YQ0 1117 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 SPC24Q8NBT2 197 aa11.7□□□□□ -0.54
USP6-205ENST00000574788 TSNARE1Q96NA8 513 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms