RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-206ENST00000574781 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
ERCC4-206ENST00000574781 BLMP54132 1417 aaPredicted RBP11.63□□□□□ -0.55
ERCC4-206ENST00000574781 KIF1AQ12756 1690 aa11.63□□□□□ -0.55
ERCC4-206ENST00000574781 MAP3K13O43283 966 aa11.63□□□□□ -0.55
ERCC4-206ENST00000574781 USP32Q8NFA0 1604 aa11.62□□□□□ -0.55
ERCC4-206ENST00000574781 NUDT16Q96DE0 195 aaKnown RBP11.62□□□□□ -0.55
ERCC4-206ENST00000574781 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
ERCC4-206ENST00000574781 ZC3H6P61129 1189 aaKnown RBP11.61□□□□□ -0.55
ERCC4-206ENST00000574781 CHRNA2Q15822 529 aa11.61□□□□□ -0.55
ERCC4-206ENST00000574781 CDK19Q9BWU1 502 aa11.61□□□□□ -0.55
ERCC4-206ENST00000574781 PRDM11Q9NQV5 511 aa11.61□□□□□ -0.55
ERCC4-206ENST00000574781 ANKARQ7Z5J8 1434 aa11.6□□□□□ -0.55
ERCC4-206ENST00000574781 STRN4Q9NRL3 753 aa11.6□□□□□ -0.55
ERCC4-206ENST00000574781 EN1Q05925 392 aaPredicted RBP11.59□□□□□ -0.55
ERCC4-206ENST00000574781 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
ERCC4-206ENST00000574781 DLC1Q96QB1 1528 aa11.59□□□□□ -0.55
ERCC4-206ENST00000574781 ADGRB1O14514 1584 aa11.58□□□□□ -0.55
ERCC4-206ENST00000574781 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
ERCC4-206ENST00000574781 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.58□□□□□ -0.56
ERCC4-206ENST00000574781 BAG6P46379 1132 aa11.58□□□□□ -0.56
ERCC4-206ENST00000574781 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
ERCC4-206ENST00000574781 SPATA31A5Q5VU36 1347 aa11.58□□□□□ -0.56
ERCC4-206ENST00000574781 SPATA31A7Q8IWB4 1347 aa11.58□□□□□ -0.56
ERCC4-206ENST00000574781 EVA1CP58658 441 aa11.57□□□□□ -0.56
ERCC4-206ENST00000574781 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
ERCC4-206ENST00000574781 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
ERCC4-206ENST00000574781 ACEP12821 1306 aa11.57□□□□□ -0.56
ERCC4-206ENST00000574781 EIF3AQ14152 1382 aaKnown RBP11.56□□□□□ -0.56
ERCC4-206ENST00000574781 KIAA0232Q92628 1395 aa11.56□□□□□ -0.56
ERCC4-206ENST00000574781 PCDHB13Q9Y5F0 798 aa11.56□□□□□ -0.56
ERCC4-206ENST00000574781 PLCH1Q4KWH8 1693 aa11.55□□□□□ -0.56
ERCC4-206ENST00000574781 TRIM37O94972 964 aa11.55□□□□□ -0.56
ERCC4-206ENST00000574781 HRCP23327 699 aa11.55□□□□□ -0.56
ERCC4-206ENST00000574781 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
ERCC4-206ENST00000574781 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
ERCC4-206ENST00000574781 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
ERCC4-206ENST00000574781 TULP4Q9NRJ4 1543 aa11.55□□□□□ -0.56
ERCC4-206ENST00000574781 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
ERCC4-206ENST00000574781 TIE1P35590 1138 aa11.54□□□□□ -0.56
ERCC4-206ENST00000574781 SRPK2P78362 688 aaKnown RBP11.54□□□□□ -0.56
ERCC4-206ENST00000574781 R3HDM1Q15032 1099 aaKnown RBP11.54□□□□□ -0.56
ERCC4-206ENST00000574781 EZH2Q15910 746 aaKnown RBP11.54□□□□□ -0.56
ERCC4-206ENST00000574781 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
ERCC4-206ENST00000574781 SPATA31A1Q5TZJ5 1347 aa11.54□□□□□ -0.56
ERCC4-206ENST00000574781 TRPM3Q9HCF6 1732 aaPredicted RBP11.53□□□□□ -0.56
ERCC4-206ENST00000574781 NWD2Q9ULI1 1742 aa11.53□□□□□ -0.56
ERCC4-206ENST00000574781 PYGBP11216 843 aa11.53□□□□□ -0.56
ERCC4-206ENST00000574781 TMEM121BQ9BXQ6 578 aaPredicted RBP11.53□□□□□ -0.56
ERCC4-206ENST00000574781 ADGRB2O60241 1585 aa11.53□□□□□ -0.56
ERCC4-206ENST00000574781 ABCA3Q99758 1704 aa11.52□□□□□ -0.56
ERCC4-206ENST00000574781 PLEKHG3A1L390 1219 aa11.52□□□□□ -0.57
ERCC4-206ENST00000574781 APBA3O96018 575 aa11.52□□□□□ -0.57
ERCC4-206ENST00000574781 PDE3BQ13370 1112 aa11.52□□□□□ -0.57
ERCC4-206ENST00000574781 LARP1Q6PKG0 1096 aaKnown RBP11.52□□□□□ -0.57
ERCC4-206ENST00000574781 FAM196AQ6ZSG2 479 aa11.51□□□□□ -0.57
ERCC4-206ENST00000574781 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
ERCC4-206ENST00000574781 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
ERCC4-206ENST00000574781 ALS2Q96Q42 1657 aa11.51□□□□□ -0.57
ERCC4-206ENST00000574781 COL14A1Q05707 1796 aaKnown RBP11.51□□□□□ -0.57
ERCC4-206ENST00000574781 ATP7BP35670 1465 aa11.51□□□□□ -0.57
ERCC4-206ENST00000574781 CABP1Q9NZU7 370 aa11.5□□□□□ -0.57
ERCC4-206ENST00000574781 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
ERCC4-206ENST00000574781 GCP02774 474 aa11.49□□□□□ -0.57
ERCC4-206ENST00000574781 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
ERCC4-206ENST00000574781 NLRP13Q86W25 1043 aa11.49□□□□□ -0.57
ERCC4-206ENST00000574781 CAMKK2Q96RR4 588 aa11.49□□□□□ -0.57
ERCC4-206ENST00000574781 NRAPQ86VF7 1730 aa11.49□□□□□ -0.57
ERCC4-206ENST00000574781 NLRP6P59044 892 aa11.48□□□□□ -0.57
ERCC4-206ENST00000574781 NEUROD1Q13562 356 aa11.48□□□□□ -0.57
ERCC4-206ENST00000574781 TCP11L2Q8N4U5 519 aa11.48□□□□□ -0.57
ERCC4-206ENST00000574781 SIN3AQ96ST3 1273 aa11.48□□□□□ -0.57
ERCC4-206ENST00000574781 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
ERCC4-206ENST00000574781 POLR3AO14802 1390 aaPredicted RBP11.48□□□□□ -0.57
ERCC4-206ENST00000574781 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
ERCC4-206ENST00000574781 ARHGEF28Q8N1W1 1705 aaKnown RBP11.46□□□□□ -0.57
ERCC4-206ENST00000574781 PPIP5K1Q6PFW1 1433 aa11.46□□□□□ -0.57
ERCC4-206ENST00000574781 SOX12O15370 315 aa11.46□□□□□ -0.57
ERCC4-206ENST00000574781 BARGINQ6ZT62 677 aa11.46□□□□□ -0.57
ERCC4-206ENST00000574781 SSH2Q76I76 1423 aa11.45□□□□□ -0.58
ERCC4-206ENST00000574781 TRPC6Q9Y210 931 aa11.45□□□□□ -0.58
ERCC4-206ENST00000574781 CAMTA1Q9Y6Y1 1673 aa11.45□□□□□ -0.58
ERCC4-206ENST00000574781 CRYBG1Q9Y4K1 1723 aa11.43□□□□□ -0.58
ERCC4-206ENST00000574781 USP19O94966 1318 aa11.43□□□□□ -0.58
ERCC4-206ENST00000574781 TTLL13PA6NNM8 815 aa11.43□□□□□ -0.58
ERCC4-206ENST00000574781 TOM1L2Q6ZVM7 507 aa11.43□□□□□ -0.58
ERCC4-206ENST00000574781 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
ERCC4-206ENST00000574781 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
ERCC4-206ENST00000574781 CPDO75976 1380 aa11.42□□□□□ -0.58
ERCC4-206ENST00000574781 NBPF14Q5TI25 921 aa11.42□□□□□ -0.58
ERCC4-206ENST00000574781 THRAP3Q9Y2W1 955 aaKnown RBP11.42□□□□□ -0.58
ERCC4-206ENST00000574781 ITSN1Q15811 1721 aa11.42□□□□□ -0.58
ERCC4-206ENST00000574781 SNPHO15079 494 aa11.41□□□□□ -0.58
ERCC4-206ENST00000574781 PTF1AQ7RTS3 328 aa11.41□□□□□ -0.58
ERCC4-206ENST00000574781 PHRF1Q9P1Y6 1649 aaKnown RBP11.41□□□□□ -0.58
ERCC4-206ENST00000574781 RGPD1P0DJD0 1748 aa11.4□□□□□ -0.58
ERCC4-206ENST00000574781 EVC2Q86UK5 1308 aa11.4□□□□□ -0.58
ERCC4-206ENST00000574781 DDB1Q16531 1140 aa11.4□□□□□ -0.58
ERCC4-206ENST00000574781 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
ERCC4-206ENST00000574781 DISP2A7MBM2 1401 aa11.4□□□□□ -0.58
ERCC4-206ENST00000574781 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms