RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CTC1Q2NKJ3 1217 aa10.21□□□□□ -0.77
CDC27-216ENST00000574304 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.77
CDC27-216ENST00000574304 CRIPAKQ8N1N5 446 aa10.21□□□□□ -0.77
CDC27-216ENST00000574304 AXIN1O15169 862 aa10.2□□□□□ -0.78
CDC27-216ENST00000574304 ST8SIA5O15466 376 aa10.2□□□□□ -0.78
CDC27-216ENST00000574304 SMCPP49901 116 aaPredicted RBP10.2□□□□□ -0.78
CDC27-216ENST00000574304 AAASQ9NRG9 546 aa10.2□□□□□ -0.78
CDC27-216ENST00000574304 VAC14Q08AM6 782 aa10.19□□□□□ -0.78
CDC27-216ENST00000574304 WASHC4Q2M389 1173 aa10.19□□□□□ -0.78
CDC27-216ENST00000574304 WDR4P57081 412 aaKnown RBP10.18□□□□□ -0.78
CDC27-216ENST00000574304 MCCD1P59942 119 aaPredicted RBP10.18□□□□□ -0.78
CDC27-216ENST00000574304 INTS6LQ5JSJ4 861 aaKnown RBP10.18□□□□□ -0.78
CDC27-216ENST00000574304 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
CDC27-216ENST00000574304 CCDC116Q8IYX3 515 aa10.18□□□□□ -0.78
CDC27-216ENST00000574304 ZNF592Q92610 1267 aa10.18□□□□□ -0.78
CDC27-216ENST00000574304 EIF4G2P78344 907 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDC27-216ENST00000574304 ESPNB1AK53 854 aa10.16□□□□□ -0.78
CDC27-216ENST00000574304 CAPN5O15484 640 aaPredicted RBP10.16□□□□□ -0.78
CDC27-216ENST00000574304 KLF16Q9BXK1 252 aaPredicted RBP10.16□□□□□ -0.78
CDC27-216ENST00000574304 GTF3C3Q9Y5Q9 886 aa10.16□□□□□ -0.78
CDC27-216ENST00000574304 ZIC2O95409 532 aaPredicted RBP10.15□□□□□ -0.78
CDC27-216ENST00000574304 TIMP2P16035 220 aa10.15□□□□□ -0.78
CDC27-216ENST00000574304 RAB15P59190 212 aa10.15□□□□□ -0.78
CDC27-216ENST00000574304 DHX9Q08211 1270 aaKnown RBP10.15□□□□□ -0.78
CDC27-216ENST00000574304 CLUAP1Q96AJ1 413 aa10.15□□□□□ -0.78
CDC27-216ENST00000574304 EMILIN1Q9Y6C2 1016 aa10.15□□□□□ -0.78
CDC27-216ENST00000574304 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
CDC27-216ENST00000574304 PPP1R26Q5T8A7 1209 aaPredicted RBP10.14□□□□□ -0.79
CDC27-216ENST00000574304 ITPKCQ96DU7 683 aa10.14□□□□□ -0.79
CDC27-216ENST00000574304 ZFAND3Q9H8U3 227 aa10.14□□□□□ -0.79
CDC27-216ENST00000574304 SEPT12Q8IYM1 358 aa10.13□□□□□ -0.79
CDC27-216ENST00000574304 DACH1Q9UI36 760 aa10.13□□□□□ -0.79
CDC27-216ENST00000574304 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
CDC27-216ENST00000574304 ERVH48-1M5A8F1 160 aa10.11□□□□□ -0.79
CDC27-216ENST00000574304 CEP126Q9P2H0 1117 aa10.11□□□□□ -0.79
CDC27-216ENST00000574304 SOX11P35716 441 aa10.1□□□□□ -0.79
CDC27-216ENST00000574304 SEMA3FQ13275 785 aa10.1□□□□□ -0.79
CDC27-216ENST00000574304 RNF20Q5VTR2 975 aa10.1□□□□□ -0.79
CDC27-216ENST00000574304 PROSER2Q86WR7 435 aaPredicted RBP10.1□□□□□ -0.79
CDC27-216ENST00000574304 ATP13A2Q9NQ11 1180 aa10.1□□□□□ -0.79
CDC27-216ENST00000574304 A6NJR5 290 aa10.09□□□□□ -0.79
CDC27-216ENST00000574304 CCDC125Q86Z20 511 aa10.09□□□□□ -0.79
CDC27-216ENST00000574304 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
CDC27-216ENST00000574304 BMP1P13497 986 aa10.08□□□□□ -0.8
CDC27-216ENST00000574304 POM121CA8CG34 1229 aa10.07□□□□□ -0.8
CDC27-216ENST00000574304 TRIM46Q7Z4K8 759 aa10.07□□□□□ -0.8
CDC27-216ENST00000574304 FNBP4Q8N3X1 1017 aaPredicted RBP10.07□□□□□ -0.8
CDC27-216ENST00000574304 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
CDC27-216ENST00000574304 CBLBQ13191 982 aa10.06□□□□□ -0.8
CDC27-216ENST00000574304 GMPR2Q9P2T1 348 aaKnown RBP10.06□□□□□ -0.8
CDC27-216ENST00000574304 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
CDC27-216ENST00000574304 MRPL14Q6P1L8 145 aaKnown RBP10.05□□□□□ -0.8
CDC27-216ENST00000574304 MEIOBQ8N635 442 aa10.05□□□□□ -0.8
CDC27-216ENST00000574304 TRIM52Q96A61 297 aa10.05□□□□□ -0.8
CDC27-216ENST00000574304 ALG2Q9H553 416 aa10.05□□□□□ -0.8
CDC27-216ENST00000574304 PCDHB11Q9Y5F2 797 aa10.05□□□□□ -0.8
CDC27-216ENST00000574304 LILRA1O75019 489 aa10.04□□□□□ -0.8
CDC27-216ENST00000574304 Q6ZVU0 165 aa10.04□□□□□ -0.8
CDC27-216ENST00000574304 PHTF2Q8N3S3 785 aa10.04□□□□□ -0.8
CDC27-216ENST00000574304 CYLDQ9NQC7 956 aa10.04□□□□□ -0.8
CDC27-216ENST00000574304 POTECB2RU33 542 aa10.03□□□□□ -0.8
CDC27-216ENST00000574304 RNF135Q8IUD6 432 aa10.03□□□□□ -0.8
CDC27-216ENST00000574304 CCDC85AQ96PX6 553 aaPredicted RBP10.03□□□□□ -0.8
CDC27-216ENST00000574304 UPP2O95045 317 aa10.02□□□□□ -0.81
CDC27-216ENST00000574304 SCARF1Q14162 830 aa10.02□□□□□ -0.81
CDC27-216ENST00000574304 ZNF787Q6DD87 383 aa10.02□□□□□ -0.81
CDC27-216ENST00000574304 ADAMTS19Q8TE59 1207 aa10.02□□□□□ -0.81
CDC27-216ENST00000574304 SENP2Q9HC62 589 aa10.02□□□□□ -0.81
CDC27-216ENST00000574304 ADD1P35611 737 aaKnown RBP10.01□□□□□ -0.81
CDC27-216ENST00000574304 ERVK-9P63128 1117 aa10.01□□□□□ -0.81
CDC27-216ENST00000574304 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
CDC27-216ENST00000574304 PURBQ96QR8 312 aaKnown RBP10.01□□□□□ -0.81
CDC27-216ENST00000574304 TSEN34Q9BSV6 310 aaKnown RBP10.01□□□□□ -0.81
CDC27-216ENST00000574304 BMP2P12643 396 aa10□□□□□ -0.81
CDC27-216ENST00000574304 TSGA10IPQ3SY00 556 aa10□□□□□ -0.81
CDC27-216ENST00000574304 C6orf118Q5T5N4 469 aa10□□□□□ -0.81
CDC27-216ENST00000574304 HDGFL1Q5TGJ6 251 aa10□□□□□ -0.81
CDC27-216ENST00000574304 CC2D2BQ6DHV5 1058 aa10□□□□□ -0.81
CDC27-216ENST00000574304 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
CDC27-216ENST00000574304 ZFP42Q96MM3 310 aa10□□□□□ -0.81
CDC27-216ENST00000574304 DOLKQ9UPQ8 538 aa10□□□□□ -0.81
CDC27-216ENST00000574304 PIK3CDO00329 1044 aa9.99□□□□□ -0.81
CDC27-216ENST00000574304 TRAK2O60296 914 aa9.99□□□□□ -0.81
CDC27-216ENST00000574304 ADH1AP07327 375 aa9.99□□□□□ -0.81
CDC27-216ENST00000574304 SCTRP47872 440 aa9.99□□□□□ -0.81
CDC27-216ENST00000574304 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
CDC27-216ENST00000574304 TRIM47Q96LD4 638 aa9.99□□□□□ -0.81
CDC27-216ENST00000574304 CDCA7Q9BWT1 371 aaPredicted RBP9.99□□□□□ -0.81
CDC27-216ENST00000574304 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
CDC27-216ENST00000574304 RELBQ01201 579 aa9.98□□□□□ -0.81
CDC27-216ENST00000574304 ZMYND15Q9H091 742 aa9.98□□□□□ -0.81
CDC27-216ENST00000574304 ESF1Q9H501 851 aaKnown RBP9.98□□□□□ -0.81
CDC27-216ENST00000574304 CHIC2Q9UKJ5 165 aa9.98□□□□□ -0.81
CDC27-216ENST00000574304 PLPP7Q8NBV4 271 aa9.97□□□□□ -0.81
CDC27-216ENST00000574304 GLMNQ92990 594 aa9.97□□□□□ -0.81
CDC27-216ENST00000574304 MYCP01106 439 aaPredicted RBP9.96□□□□□ -0.82
CDC27-216ENST00000574304 SNRPBP14678 240 aaKnown RBP9.96□□□□□ -0.82
CDC27-216ENST00000574304 MAP7D1Q3KQU3 841 aa9.96□□□□□ -0.82
CDC27-216ENST00000574304 SKIP12755 728 aa9.95□□□□□ -0.82
CDC27-216ENST00000574304 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms