RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 WWC3Q9ULE0 1092 aa10.88□□□□□ -0.67
SMG6-211ENST00000572369 MAP3K5Q99683 1374 aa10.88□□□□□ -0.67
SMG6-211ENST00000572369 ABTB2Q8N961 1025 aa10.87□□□□□ -0.67
SMG6-211ENST00000572369 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
SMG6-211ENST00000572369 AATKQ6ZMQ8 1374 aa10.87□□□□□ -0.67
SMG6-211ENST00000572369 EIF4G2P78344 907 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMG6-211ENST00000572369 CDCA8Q53HL2 280 aa10.86□□□□□ -0.67
SMG6-211ENST00000572369 HDGFL2Q7Z4V5 671 aaPredicted RBP10.86□□□□□ -0.67
SMG6-211ENST00000572369 TESK2Q96S53 571 aa10.86□□□□□ -0.67
SMG6-211ENST00000572369 ZNF692Q9BU19 519 aaPredicted RBP10.86□□□□□ -0.67
SMG6-211ENST00000572369 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
SMG6-211ENST00000572369 USP6P35125 1406 aa10.85□□□□□ -0.67
SMG6-211ENST00000572369 NLRP13Q86W25 1043 aa10.85□□□□□ -0.67
SMG6-211ENST00000572369 TERF2IPQ9NYB0 399 aa10.85□□□□□ -0.67
SMG6-211ENST00000572369 BRD4O60885 1362 aaPredicted RBP10.85□□□□□ -0.67
SMG6-211ENST00000572369 KTN1Q86UP2 1357 aaKnown RBP10.85□□□□□ -0.67
SMG6-211ENST00000572369 PCNTO95613 3336 aa10.84□□□□□ -0.67
SMG6-211ENST00000572369 PHRF1Q9P1Y6 1649 aaKnown RBP10.84□□□□□ -0.67
SMG6-211ENST00000572369 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
SMG6-211ENST00000572369 PUS7Q96PZ0 661 aaKnown RBP10.84□□□□□ -0.67
SMG6-211ENST00000572369 POLR3GLQ9BT43 218 aa10.84□□□□□ -0.67
SMG6-211ENST00000572369 SLC12A5Q9H2X9 1139 aa10.84□□□□□ -0.67
SMG6-211ENST00000572369 CRYBG1Q9Y4K1 1723 aa10.84□□□□□ -0.67
SMG6-211ENST00000572369 NLRP6P59044 892 aa10.83□□□□□ -0.68
SMG6-211ENST00000572369 JMYQ8N9B5 988 aa10.83□□□□□ -0.68
SMG6-211ENST00000572369 SGIP1Q9BQI5 828 aa10.83□□□□□ -0.68
SMG6-211ENST00000572369 ZBTB7CA1YPR0 619 aa10.82□□□□□ -0.68
SMG6-211ENST00000572369 HSPA5P11021 654 aaKnown RBP10.82□□□□□ -0.68
SMG6-211ENST00000572369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMG6-211ENST00000572369 PRDM11Q9NQV5 511 aa10.82□□□□□ -0.68
SMG6-211ENST00000572369 RGPD3A6NKT7 1758 aaPredicted RBP10.82□□□□□ -0.68
SMG6-211ENST00000572369 RGPD4Q7Z3J3 1758 aa10.82□□□□□ -0.68
SMG6-211ENST00000572369 TNS2Q63HR2 1409 aa10.82□□□□□ -0.68
SMG6-211ENST00000572369 TTC21BQ7Z4L5 1316 aa10.82□□□□□ -0.68
SMG6-211ENST00000572369 COL14A1Q05707 1796 aaKnown RBP10.81□□□□□ -0.68
SMG6-211ENST00000572369 ZC3H6P61129 1189 aaKnown RBP10.81□□□□□ -0.68
SMG6-211ENST00000572369 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
SMG6-211ENST00000572369 ARXQ96QS3 562 aa10.81□□□□□ -0.68
SMG6-211ENST00000572369 PIK3C2AO00443 1686 aa10.81□□□□□ -0.68
SMG6-211ENST00000572369 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
SMG6-211ENST00000572369 SPATA31A5Q5VU36 1347 aa10.81□□□□□ -0.68
SMG6-211ENST00000572369 SPATA31A7Q8IWB4 1347 aa10.81□□□□□ -0.68
SMG6-211ENST00000572369 TTC21AQ8NDW8 1320 aa10.81□□□□□ -0.68
SMG6-211ENST00000572369 KLRG1Q96E93 195 aa10.8□□□□□ -0.68
SMG6-211ENST00000572369 MTFR1LQ9H019 292 aa10.8□□□□□ -0.68
SMG6-211ENST00000572369 WDR90Q96KV7 1748 aa10.8□□□□□ -0.68
SMG6-211ENST00000572369 A0A1W2PP64 1363 aa10.79□□□□□ -0.68
SMG6-211ENST00000572369 EDC4Q6P2E9 1401 aaKnown RBP10.79□□□□□ -0.68
SMG6-211ENST00000572369 SOX12O15370 315 aa10.79□□□□□ -0.68
SMG6-211ENST00000572369 ZNF526Q8TF50 670 aaPredicted RBP10.79□□□□□ -0.68
SMG6-211ENST00000572369 BTG4Q9NY30 223 aa10.79□□□□□ -0.68
SMG6-211ENST00000572369 KIAA0232Q92628 1395 aa10.78□□□□□ -0.68
SMG6-211ENST00000572369 GCP02774 474 aa10.78□□□□□ -0.68
SMG6-211ENST00000572369 CHRNA2Q15822 529 aa10.78□□□□□ -0.68
SMG6-211ENST00000572369 CD163L1Q9NR16 1453 aa10.78□□□□□ -0.68
SMG6-211ENST00000572369 ADCY9O60503 1353 aa10.77□□□□□ -0.68
SMG6-211ENST00000572369 SSH2Q76I76 1423 aa10.77□□□□□ -0.68
SMG6-211ENST00000572369 FAM161AQ3B820 660 aa10.77□□□□□ -0.69
SMG6-211ENST00000572369 NME9Q86XW9 330 aa10.77□□□□□ -0.69
SMG6-211ENST00000572369 KCNH5Q8NCM2 988 aa10.77□□□□□ -0.69
SMG6-211ENST00000572369 USP19O94966 1318 aa10.77□□□□□ -0.69
SMG6-211ENST00000572369 ANKRD36BQ8N2N9 1353 aa10.77□□□□□ -0.69
SMG6-211ENST00000572369 EVA1CP58658 441 aa10.76□□□□□ -0.69
SMG6-211ENST00000572369 STRN4Q9NRL3 753 aa10.76□□□□□ -0.69
SMG6-211ENST00000572369 KIF20BQ96Q89 1820 aa10.75□□□□□ -0.69
SMG6-211ENST00000572369 SLIT3O75094 1523 aa10.75□□□□□ -0.69
SMG6-211ENST00000572369 KIF3CO14782 793 aa10.75□□□□□ -0.69
SMG6-211ENST00000572369 GRIN3BO60391 1043 aa10.75□□□□□ -0.69
SMG6-211ENST00000572369 BCL11BQ9C0K0 894 aaPredicted RBP10.75□□□□□ -0.69
SMG6-211ENST00000572369 COG3Q96JB2 828 aa10.74□□□□□ -0.69
SMG6-211ENST00000572369 LTN1O94822 1766 aa10.74□□□□□ -0.69
SMG6-211ENST00000572369 USP54Q70EL1 1684 aa10.73□□□□□ -0.69
SMG6-211ENST00000572369 RGPD5Q99666 1765 aa10.73□□□□□ -0.69
SMG6-211ENST00000572369 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
SMG6-211ENST00000572369 CPDO75976 1380 aa10.73□□□□□ -0.69
SMG6-211ENST00000572369 PLSCR1O15162 318 aa10.72□□□□□ -0.69
SMG6-211ENST00000572369 YBX3P16989 372 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMG6-211ENST00000572369 KLHL34Q8N239 644 aa10.72□□□□□ -0.69
SMG6-211ENST00000572369 GGNBP2Q9H3C7 697 aa10.72□□□□□ -0.69
SMG6-211ENST00000572369 USP35Q9P2H5 1018 aa10.72□□□□□ -0.69
SMG6-211ENST00000572369 USP31Q70CQ4 1352 aa10.72□□□□□ -0.69
SMG6-211ENST00000572369 CSB-PGBD3P0DP91 1061 aa10.71□□□□□ -0.69
SMG6-211ENST00000572369 HTRA3P83110 453 aa10.71□□□□□ -0.69
SMG6-211ENST00000572369 SPATA31A1Q5TZJ5 1347 aa10.71□□□□□ -0.69
SMG6-211ENST00000572369 LMO7Q8WWI1 1683 aa10.71□□□□□ -0.69
SMG6-211ENST00000572369 NSD3Q9BZ95 1437 aa10.71□□□□□ -0.69
SMG6-211ENST00000572369 STK32BQ9NY57 414 aa10.71□□□□□ -0.69
SMG6-211ENST00000572369 NFAT5O94916 1531 aa10.7□□□□□ -0.7
SMG6-211ENST00000572369 OVOS2A0A0J9YW53 1432 aa10.69□□□□□ -0.7
SMG6-211ENST00000572369 OVOS2Q6IE36 1432 aa10.69□□□□□ -0.7
SMG6-211ENST00000572369 CGNL1Q0VF96 1302 aa10.69□□□□□ -0.7
SMG6-211ENST00000572369 C11orf95C9JLR9 678 aaPredicted RBP10.69□□□□□ -0.7
SMG6-211ENST00000572369 FYB1O15117 783 aa10.69□□□□□ -0.7
SMG6-211ENST00000572369 HSPA1AP0DMV8 641 aaKnown RBP10.69□□□□□ -0.7
SMG6-211ENST00000572369 HSPA1BP0DMV9 641 aaKnown RBP10.69□□□□□ -0.7
SMG6-211ENST00000572369 SLC15A2Q16348 729 aa10.69□□□□□ -0.7
SMG6-211ENST00000572369 ARHGEF25Q86VW2 580 aa10.69□□□□□ -0.7
SMG6-211ENST00000572369 COL18A1P39060 1754 aa10.69□□□□□ -0.7
SMG6-211ENST00000572369 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
SMG6-211ENST00000572369 TOMM70O94826 608 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms