RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 GJD4Q96KN9 370 aaPredicted RBP12.26□□□□□ -0.45
SMG6-210ENST00000572205 AATKQ6ZMQ8 1374 aa12.26□□□□□ -0.45
SMG6-210ENST00000572205 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
SMG6-210ENST00000572205 GCP02774 474 aa12.25□□□□□ -0.45
SMG6-210ENST00000572205 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
SMG6-210ENST00000572205 NME9Q86XW9 330 aa12.25□□□□□ -0.45
SMG6-210ENST00000572205 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
SMG6-210ENST00000572205 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
SMG6-210ENST00000572205 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
SMG6-210ENST00000572205 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
SMG6-210ENST00000572205 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
SMG6-210ENST00000572205 DISP2A7MBM2 1401 aa12.24□□□□□ -0.45
SMG6-210ENST00000572205 ONECUT3O60422 494 aaPredicted RBP12.24□□□□□ -0.45
SMG6-210ENST00000572205 HSPA5P11021 654 aaKnown RBP12.24□□□□□ -0.45
SMG6-210ENST00000572205 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
SMG6-210ENST00000572205 C11orf95C9JLR9 678 aaPredicted RBP12.23□□□□□ -0.45
SMG6-210ENST00000572205 ZC3H6P61129 1189 aaKnown RBP12.23□□□□□ -0.45
SMG6-210ENST00000572205 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
SMG6-210ENST00000572205 NSD3Q9BZ95 1437 aa12.22□□□□□ -0.45
SMG6-210ENST00000572205 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
SMG6-210ENST00000572205 TMF1P82094 1093 aa12.22□□□□□ -0.45
SMG6-210ENST00000572205 ARHGEF25Q86VW2 580 aa12.22□□□□□ -0.45
SMG6-210ENST00000572205 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
SMG6-210ENST00000572205 CARD14Q9BXL6 1004 aa12.22□□□□□ -0.45
SMG6-210ENST00000572205 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
SMG6-210ENST00000572205 MAP2P11137 1827 aaKnown RBP12.22□□□□□ -0.45
SMG6-210ENST00000572205 RREB1Q92766 1687 aa12.22□□□□□ -0.45
SMG6-210ENST00000572205 NLRP6P59044 892 aa12.21□□□□□ -0.45
SMG6-210ENST00000572205 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.45
SMG6-210ENST00000572205 CRB1P82279 1406 aa12.2□□□□□ -0.46
SMG6-210ENST00000572205 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
SMG6-210ENST00000572205 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
SMG6-210ENST00000572205 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMG6-210ENST00000572205 RGPD3A6NKT7 1758 aaPredicted RBP12.2□□□□□ -0.46
SMG6-210ENST00000572205 RGPD4Q7Z3J3 1758 aa12.2□□□□□ -0.46
SMG6-210ENST00000572205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMG6-210ENST00000572205 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
SMG6-210ENST00000572205 EIF4G2P78344 907 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMG6-210ENST00000572205 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
SMG6-210ENST00000572205 HDGFL2Q7Z4V5 671 aaPredicted RBP12.18□□□□□ -0.46
SMG6-210ENST00000572205 BLMP54132 1417 aaPredicted RBP12.18□□□□□ -0.46
SMG6-210ENST00000572205 NCAPD2Q15021 1401 aa12.18□□□□□ -0.46
SMG6-210ENST00000572205 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
SMG6-210ENST00000572205 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
SMG6-210ENST00000572205 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
SMG6-210ENST00000572205 NUP188Q5SRE5 1749 aa12.17□□□□□ -0.46
SMG6-210ENST00000572205 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
SMG6-210ENST00000572205 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
SMG6-210ENST00000572205 ERBB3P21860 1342 aa12.16□□□□□ -0.46
SMG6-210ENST00000572205 KIF7Q2M1P5 1343 aa12.16□□□□□ -0.46
SMG6-210ENST00000572205 WDR17Q8IZU2 1322 aa12.16□□□□□ -0.46
SMG6-210ENST00000572205 FYB1O15117 783 aa12.16□□□□□ -0.46
SMG6-210ENST00000572205 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
SMG6-210ENST00000572205 RTL1A6NKG5 1358 aa12.16□□□□□ -0.46
SMG6-210ENST00000572205 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
SMG6-210ENST00000572205 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
SMG6-210ENST00000572205 KCNH5Q8NCM2 988 aa12.15□□□□□ -0.46
SMG6-210ENST00000572205 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
SMG6-210ENST00000572205 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
SMG6-210ENST00000572205 TNS2Q63HR2 1409 aa12.14□□□□□ -0.47
SMG6-210ENST00000572205 FBLN1P23142 703 aa12.14□□□□□ -0.47
SMG6-210ENST00000572205 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
SMG6-210ENST00000572205 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
SMG6-210ENST00000572205 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
SMG6-210ENST00000572205 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
SMG6-210ENST00000572205 MEGF6O75095 1541 aa12.12□□□□□ -0.47
SMG6-210ENST00000572205 SOX12O15370 315 aa12.12□□□□□ -0.47
SMG6-210ENST00000572205 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
SMG6-210ENST00000572205 GGNBP2Q9H3C7 697 aa12.12□□□□□ -0.47
SMG6-210ENST00000572205 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
SMG6-210ENST00000572205 BCL9O00512 1426 aa12.11□□□□□ -0.47
SMG6-210ENST00000572205 PROM2Q8N271 834 aa12.11□□□□□ -0.47
SMG6-210ENST00000572205 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
SMG6-210ENST00000572205 KIF24Q5T7B8 1368 aa12.1□□□□□ -0.47
SMG6-210ENST00000572205 BTAF1O14981 1849 aa12.1□□□□□ -0.47
SMG6-210ENST00000572205 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
SMG6-210ENST00000572205 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
SMG6-210ENST00000572205 PAPPAQ13219 1627 aa12.09□□□□□ -0.47
SMG6-210ENST00000572205 HOXC9P31274 260 aa12.09□□□□□ -0.47
SMG6-210ENST00000572205 KRT27Q7Z3Y8 459 aa12.09□□□□□ -0.47
SMG6-210ENST00000572205 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
SMG6-210ENST00000572205 THRAP3Q9Y2W1 955 aaKnown RBP12.09□□□□□ -0.47
SMG6-210ENST00000572205 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
SMG6-210ENST00000572205 NSD2O96028 1365 aa12.08□□□□□ -0.48
SMG6-210ENST00000572205 FLT4P35916 1363 aa12.08□□□□□ -0.48
SMG6-210ENST00000572205 RRS1Q15050 365 aaKnown RBP12.08□□□□□ -0.48
SMG6-210ENST00000572205 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
SMG6-210ENST00000572205 IP6K1Q92551 441 aa12.08□□□□□ -0.48
SMG6-210ENST00000572205 COG3Q96JB2 828 aa12.08□□□□□ -0.48
SMG6-210ENST00000572205 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
SMG6-210ENST00000572205 INSRP06213 1382 aa12.07□□□□□ -0.48
SMG6-210ENST00000572205 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
SMG6-210ENST00000572205 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
SMG6-210ENST00000572205 PER1O15534 1290 aaPredicted RBP12.07□□□□□ -0.48
SMG6-210ENST00000572205 LY75O60449 1722 aa12.07□□□□□ -0.48
SMG6-210ENST00000572205 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
SMG6-210ENST00000572205 ZBTB7CA1YPR0 619 aa12.06□□□□□ -0.48
SMG6-210ENST00000572205 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
SMG6-210ENST00000572205 PANK3Q9H999 370 aa12.06□□□□□ -0.48
SMG6-210ENST00000572205 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms