RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 CIZ1Q9ULV3 898 aaPredicted RBP21.76■■□□□ 1.07
SCARF1-205ENST00000571272 MYO5BQ9ULV0 1848 aa21.76■■□□□ 1.07
SCARF1-205ENST00000571272 ANKRD26Q9UPS8 1709 aa21.76■■□□□ 1.07
SCARF1-205ENST00000571272 WAPLQ7Z5K2 1190 aa21.76■■□□□ 1.07
SCARF1-205ENST00000571272 NAP1L5Q96NT1 182 aaPredicted RBP21.76■■□□□ 1.07
SCARF1-205ENST00000571272 CLCN1P35523 988 aa21.75■■□□□ 1.07
SCARF1-205ENST00000571272 K7ELQ4 463 aaPredicted RBP21.74■■□□□ 1.07
SCARF1-205ENST00000571272 ARHGAP45Q92619 1136 aa21.74■■□□□ 1.07
SCARF1-205ENST00000571272 GNAI1P63096 354 aa21.74■■□□□ 1.07
SCARF1-205ENST00000571272 TWISTNBQ3B726 338 aaPredicted RBP21.74■■□□□ 1.07
SCARF1-205ENST00000571272 CHMP4BQ9H444 224 aaKnown RBP21.74■■□□□ 1.07
SCARF1-205ENST00000571272 CFAP74Q9C0B2 1584 aa21.74■■□□□ 1.07
SCARF1-205ENST00000571272 STAG3Q9UJ98 1225 aa21.73■■□□□ 1.07
SCARF1-205ENST00000571272 C8orf58Q8NAV2 365 aa21.73■■□□□ 1.07
SCARF1-205ENST00000571272 GAS2L2Q8NHY3 880 aa21.73■■□□□ 1.07
SCARF1-205ENST00000571272 ARHGAP31Q2M1Z3 1444 aa21.72■■□□□ 1.07
SCARF1-205ENST00000571272 FAM83GA6ND36 823 aa21.72■■□□□ 1.07
SCARF1-205ENST00000571272 SSFA2P28290 1259 aa21.72■■□□□ 1.07
SCARF1-205ENST00000571272 IFT57Q9NWB7 429 aa21.72■■□□□ 1.07
SCARF1-205ENST00000571272 ZRANB1Q9UGI0 708 aa21.72■■□□□ 1.07
SCARF1-205ENST00000571272 CALD1Q05682 793 aaKnown RBP21.71■■□□□ 1.07
SCARF1-205ENST00000571272 PTCH1Q13635 1447 aa21.71■■□□□ 1.07
SCARF1-205ENST00000571272 ABCC4O15439 1325 aa21.71■■□□□ 1.07
SCARF1-205ENST00000571272 DCTN1Q14203 1278 aa21.7■■□□□ 1.06
SCARF1-205ENST00000571272 ARHGEF40Q8TER5 1519 aa21.7■■□□□ 1.06
SCARF1-205ENST00000571272 PIK3R4Q99570 1358 aa21.7■■□□□ 1.06
SCARF1-205ENST00000571272 CDC45O75419 566 aa21.7■■□□□ 1.06
SCARF1-205ENST00000571272 GSPT1P15170 499 aaKnown RBP21.7■■□□□ 1.06
SCARF1-205ENST00000571272 DIP2CQ9Y2E4 1556 aa21.69■■□□□ 1.06
SCARF1-205ENST00000571272 NME9Q86XW9 330 aa21.69■■□□□ 1.06
SCARF1-205ENST00000571272 ZNF853P0CG23 659 aa21.69■■□□□ 1.06
SCARF1-205ENST00000571272 IL13P35225 146 aa21.69■■□□□ 1.06
SCARF1-205ENST00000571272 ERBB4Q15303 1308 aa21.68■■□□□ 1.06
SCARF1-205ENST00000571272 ISY1Q9ULR0 285 aaKnown RBP21.68■■□□□ 1.06
SCARF1-205ENST00000571272 YEATS2Q9ULM3 1422 aa21.68■■□□□ 1.06
SCARF1-205ENST00000571272 SKOR2Q2VWA4 1001 aaPredicted RBP21.68■■□□□ 1.06
SCARF1-205ENST00000571272 ESPNB1AK53 854 aa21.67■■□□□ 1.06
SCARF1-205ENST00000571272 C16orf71Q8IYS4 520 aaPredicted RBP21.67■■□□□ 1.06
SCARF1-205ENST00000571272 UBE2Q2Q8WVN8 375 aa21.67■■□□□ 1.06
SCARF1-205ENST00000571272 KIF20BQ96Q89 1820 aa21.67■■□□□ 1.06
SCARF1-205ENST00000571272 CLTCQ00610 1675 aaKnown RBP21.67■■□□□ 1.06
SCARF1-205ENST00000571272 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
SCARF1-205ENST00000571272 RRS1Q15050 365 aaKnown RBP21.67■■□□□ 1.06
SCARF1-205ENST00000571272 TRIM44Q96DX7 344 aaPredicted RBP21.67■■□□□ 1.06
SCARF1-205ENST00000571272 PLEKHM2Q8IWE5 1019 aa21.66■■□□□ 1.06
SCARF1-205ENST00000571272 MAP2P11137 1827 aaKnown RBP21.66■■□□□ 1.06
SCARF1-205ENST00000571272 CDC42BPGQ6DT37 1551 aa21.66■■□□□ 1.06
SCARF1-205ENST00000571272 CFAP44Q96MT7 982 aa21.66■■□□□ 1.06
SCARF1-205ENST00000571272 API5Q9BZZ5 524 aaKnown RBP21.66■■□□□ 1.06
SCARF1-205ENST00000571272 ALKQ9UM73 1620 aa21.65■■□□□ 1.06
SCARF1-205ENST00000571272 APBB1O00213 710 aa21.64■■□□□ 1.06
SCARF1-205ENST00000571272 OTUD7AQ8TE49 926 aaPredicted RBP21.63■■□□□ 1.05
SCARF1-205ENST00000571272 KRT24Q2M2I5 525 aa21.62■■□□□ 1.05
SCARF1-205ENST00000571272 DDX49Q9Y6V7 483 aaKnown RBP21.62■■□□□ 1.05
SCARF1-205ENST00000571272 NCKAP5LQ9HCH0 1330 aa21.62■■□□□ 1.05
SCARF1-205ENST00000571272 GOLGA6L22H0YM25 854 aa21.62■■□□□ 1.05
SCARF1-205ENST00000571272 DCTPP1Q9H773 170 aa21.62■■□□□ 1.05
SCARF1-205ENST00000571272 AK9Q5TCS8 1911 aa21.62■■□□□ 1.05
SCARF1-205ENST00000571272 BAG4O95429 457 aaKnown RBP21.62■■□□□ 1.05
SCARF1-205ENST00000571272 PREX1Q8TCU6 1659 aa21.61■■□□□ 1.05
SCARF1-205ENST00000571272 PTMSP20962 102 aa21.61■■□□□ 1.05
SCARF1-205ENST00000571272 NEO1Q92859 1461 aa21.61■■□□□ 1.05
SCARF1-205ENST00000571272 LMOD3Q0VAK6 560 aa21.6■■□□□ 1.05
SCARF1-205ENST00000571272 TTC22Q5TAA0 569 aa21.6■■□□□ 1.05
SCARF1-205ENST00000571272 RIMS2Q9UQ26 1411 aa21.59■■□□□ 1.05
SCARF1-205ENST00000571272 SMARCA5O60264 1052 aaPredicted RBP21.59■■□□□ 1.05
SCARF1-205ENST00000571272 RABEP1Q15276 862 aa21.59■■□□□ 1.05
SCARF1-205ENST00000571272 MCTP1Q6DN14 999 aa21.58■■□□□ 1.05
SCARF1-205ENST00000571272 COG3Q96JB2 828 aa21.58■■□□□ 1.05
SCARF1-205ENST00000571272 ATP7BP35670 1465 aa21.58■■□□□ 1.04
SCARF1-205ENST00000571272 USP26Q9BXU7 913 aa21.58■■□□□ 1.04
SCARF1-205ENST00000571272 NCLP19338 710 aaKnown RBP21.57■■□□□ 1.04
SCARF1-205ENST00000571272 PKP1Q13835 747 aa21.57■■□□□ 1.04
SCARF1-205ENST00000571272 NASPP49321 788 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-205ENST00000571272 KLHL40Q2TBA0 621 aa21.56■■□□□ 1.04
SCARF1-205ENST00000571272 AEBP1Q8IUX7 1158 aa21.56■■□□□ 1.04
SCARF1-205ENST00000571272 KNDC1Q76NI1 1749 aa21.56■■□□□ 1.04
SCARF1-205ENST00000571272 WASLO00401 505 aaPredicted RBP21.55■■□□□ 1.04
SCARF1-205ENST00000571272 OSCARQ8IYS5 282 aa21.55■■□□□ 1.04
SCARF1-205ENST00000571272 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
SCARF1-205ENST00000571272 SDSP20132 328 aa21.55■■□□□ 1.04
SCARF1-205ENST00000571272 DLG5Q8TDM6 1919 aa21.55■■□□□ 1.04
SCARF1-205ENST00000571272 INTS3Q68E01 1043 aaKnown RBP21.54■■□□□ 1.04
SCARF1-205ENST00000571272 TXNDC2Q86VQ3 553 aa21.54■■□□□ 1.04
SCARF1-205ENST00000571272 EDC4Q6P2E9 1401 aaKnown RBP21.54■■□□□ 1.04
SCARF1-205ENST00000571272 CLEC17AQ6ZS10 378 aa21.54■■□□□ 1.04
SCARF1-205ENST00000571272 CDK12Q9NYV4 1490 aaPredicted RBP21.53■■□□□ 1.04
SCARF1-205ENST00000571272 CEP85Q6P2H3 762 aa21.53■■□□□ 1.04
SCARF1-205ENST00000571272 MCM10Q7L590 875 aa21.53■■□□□ 1.04
SCARF1-205ENST00000571272 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
SCARF1-205ENST00000571272 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
SCARF1-205ENST00000571272 CPSF1Q10570 1443 aaKnown RBP21.52■■□□□ 1.04
SCARF1-205ENST00000571272 CAVIN1Q6NZI2 390 aaKnown RBP21.52■■□□□ 1.04
SCARF1-205ENST00000571272 MEIS3Q99687 375 aa21.52■■□□□ 1.04
SCARF1-205ENST00000571272 ZGPATQ8N5A5 531 aaKnown RBP21.52■■□□□ 1.04
SCARF1-205ENST00000571272 NUCB2P80303 420 aa21.51■■□□□ 1.03
SCARF1-205ENST00000571272 RICTORQ6R327 1708 aa21.51■■□□□ 1.03
SCARF1-205ENST00000571272 RPAP2Q8IXW5 612 aaPredicted RBP21.51■■□□□ 1.03
SCARF1-205ENST00000571272 ATP10DQ9P241 1426 aa21.51■■□□□ 1.03
SCARF1-205ENST00000571272 CCDC173Q0VFZ6 552 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms