RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RBM27Q9P2N5 1060 aaKnown RBP4.69□□□□□ -1.66
SMG6-208ENST00000570874 CCDC144AA2RUR9 1427 aa4.69□□□□□ -1.66
SMG6-208ENST00000570874 ACIN1Q9UKV3 1341 aaKnown RBP4.69□□□□□ -1.66
SMG6-208ENST00000570874 MYOM1P52179 1685 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 QRICH2Q9H0J4 1663 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 C11orf95C9JLR9 678 aaPredicted RBP4.68□□□□□ -1.66
SMG6-208ENST00000570874 ERCC3P19447 782 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 PDE4DQ08499 809 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 DDX10Q13206 875 aaKnown RBP4.68□□□□□ -1.66
SMG6-208ENST00000570874 OS9Q13438 667 aaPredicted RBP4.68□□□□□ -1.66
SMG6-208ENST00000570874 RGL3Q3MIN7 710 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 SMYD5Q6GMV2 418 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 ZNF687Q8N1G0 1237 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 PDCD7Q8N8D1 485 aaKnown RBP4.68□□□□□ -1.66
SMG6-208ENST00000570874 C8orf37Q96NL8 207 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 ANP32EQ9BTT0 268 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 UHRF1BP1Q6BDS2 1440 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 SPATA31E1Q6ZUB1 1445 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 REREQ9P2R6 1566 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 ARHGEF28Q8N1W1 1705 aaKnown RBP4.68□□□□□ -1.66
SMG6-208ENST00000570874 TMEM131LA2VDJ0 1609 aa4.68□□□□□ -1.66
SMG6-208ENST00000570874 C3P01024 1663 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 ADGRB3O60242 1522 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 SETD1AO15047 1707 aaKnown RBP4.67□□□□□ -1.66
SMG6-208ENST00000570874 PTPRTO14522 1441 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 NPATQ14207 1427 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 PRAG1Q86YV5 1406 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 RBM47A0AV96 593 aaKnown RBP4.67□□□□□ -1.66
SMG6-208ENST00000570874 TCF3P15923 654 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 MCCD1P59942 119 aaPredicted RBP4.67□□□□□ -1.66
SMG6-208ENST00000570874 RALBP1Q15311 655 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 FAM43BQ6ZT52 329 aaPredicted RBP4.67□□□□□ -1.66
SMG6-208ENST00000570874 SND1Q7KZF4 910 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMG6-208ENST00000570874 WWC1Q8IX03 1113 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 MICAL1Q8TDZ2 1067 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 DCAF11Q8TEB1 546 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 DDRGK1Q96HY6 314 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 SUGT1Q9Y2Z0 365 aa4.67□□□□□ -1.66
SMG6-208ENST00000570874 KANK1Q14678 1352 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 SEMA3EO15041 775 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 GGT6Q6P531 493 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 ANKRD13DQ6ZTN6 518 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 KRI1Q8N9T8 703 aaKnown RBP4.66□□□□□ -1.66
SMG6-208ENST00000570874 MORC4Q8TE76 937 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 IPO4Q8TEX9 1081 aaKnown RBP4.66□□□□□ -1.66
SMG6-208ENST00000570874 UBXN4Q92575 508 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 L3MBTL3Q96JM7 780 aaPredicted RBP4.66□□□□□ -1.66
SMG6-208ENST00000570874 FAM117AQ9C073 453 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 UBA5Q9GZZ9 404 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 TERF2IPQ9NYB0 399 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 HCSTQ9UBK5 93 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 NAP1L2Q9ULW6 460 aaPredicted RBP4.66□□□□□ -1.66
SMG6-208ENST00000570874 WASHC2AQ641Q2 1341 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 NEXMIFQ5QGS0 1516 aa4.66□□□□□ -1.66
SMG6-208ENST00000570874 USP47Q96K76 1375 aa4.65□□□□□ -1.66
SMG6-208ENST00000570874 NEURL4Q96JN8 1562 aa4.65□□□□□ -1.66
SMG6-208ENST00000570874 MYO3AQ8NEV4 1616 aa4.65□□□□□ -1.66
SMG6-208ENST00000570874 KDM5AP29375 1690 aaKnown RBP4.65□□□□□ -1.66
SMG6-208ENST00000570874 TRIM66O15016 1216 aa4.65□□□□□ -1.67
SMG6-208ENST00000570874 MCM6Q14566 821 aa4.65□□□□□ -1.67
SMG6-208ENST00000570874 NBPF1Q3BBV0 1214 aa4.65□□□□□ -1.67
SMG6-208ENST00000570874 FNBP4Q8N3X1 1017 aaPredicted RBP4.65□□□□□ -1.67
SMG6-208ENST00000570874 SECISBP2LQ93073 1101 aaKnown RBP4.65□□□□□ -1.67
SMG6-208ENST00000570874 MRRFQ96E11 262 aaKnown RBP4.65□□□□□ -1.67
SMG6-208ENST00000570874 SGSM3Q96HU1 749 aa4.65□□□□□ -1.67
SMG6-208ENST00000570874 YTHDC1Q96MU7 727 aaKnown RBP4.65□□□□□ -1.67
SMG6-208ENST00000570874 UBR1Q8IWV7 1749 aa4.65□□□□□ -1.67
SMG6-208ENST00000570874 AGLP35573 1532 aa4.65□□□□□ -1.67
SMG6-208ENST00000570874 CCDC7Q96M83 1385 aa4.65□□□□□ -1.67
SMG6-208ENST00000570874 RIMS1Q86UR5 1692 aaKnown RBP4.64□□□□□ -1.67
SMG6-208ENST00000570874 RGPD8O14715 1765 aaPredicted RBP4.64□□□□□ -1.67
SMG6-208ENST00000570874 EIF4G2P78344 907 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMG6-208ENST00000570874 RBM26Q5T8P6 1007 aaKnown RBP4.64□□□□□ -1.67
SMG6-208ENST00000570874 CCDC181Q5TID7 509 aa4.64□□□□□ -1.67
SMG6-208ENST00000570874 APBB1IPQ7Z5R6 666 aaPredicted RBP4.64□□□□□ -1.67
SMG6-208ENST00000570874 PLCD3Q8N3E9 789 aa4.64□□□□□ -1.67
SMG6-208ENST00000570874 SIRT1Q96EB6 747 aa4.64□□□□□ -1.67
SMG6-208ENST00000570874 MAGEC2Q9UBF1 373 aaPredicted RBP4.64□□□□□ -1.67
SMG6-208ENST00000570874 NOS1P29475 1434 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 CNTLNQ9NXG0 1405 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 ASXL1Q8IXJ9 1541 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 SPATA31D1Q6ZQQ2 1576 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 PLEKHG3A1L390 1219 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 RIOK3O14730 519 aaKnown RBP4.63□□□□□ -1.67
SMG6-208ENST00000570874 RGS20O76081 388 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 PHF14O94880 888 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 SF3A1Q15459 793 aaKnown RBP4.63□□□□□ -1.67
SMG6-208ENST00000570874 FTSJ3Q8IY81 847 aaKnown RBP4.63□□□□□ -1.67
SMG6-208ENST00000570874 RNF25Q96BH1 459 aaPredicted RBP4.63□□□□□ -1.67
SMG6-208ENST00000570874 USTQ9Y2C2 406 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 IVNS1ABPQ9Y6Y0 642 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 NRXN3Q9Y4C0 1643 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 KIF7Q2M1P5 1343 aa4.63□□□□□ -1.67
SMG6-208ENST00000570874 ROCK2O75116 1388 aaKnown RBP4.63□□□□□ -1.67
SMG6-208ENST00000570874 MYOM2P54296 1465 aa4.62□□□□□ -1.67
SMG6-208ENST00000570874 ERVK-7P63135 1459 aa4.62□□□□□ -1.67
SMG6-208ENST00000570874 STK25O00506 426 aa4.62□□□□□ -1.67
SMG6-208ENST00000570874 MLECQ14165 292 aa4.62□□□□□ -1.67
SMG6-208ENST00000570874 DOK7Q18PE1 504 aa4.62□□□□□ -1.67
SMG6-208ENST00000570874 FOXD4L6Q3SYB3 417 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms