RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 RAD21O60216 631 aa12.8□□□□□ -0.36
CDC27-212ENST00000570818 WDR4P57081 412 aaKnown RBP12.8□□□□□ -0.36
CDC27-212ENST00000570818 DHX9Q08211 1270 aaKnown RBP12.8□□□□□ -0.36
CDC27-212ENST00000570818 WWC1Q8IX03 1113 aa12.8□□□□□ -0.36
CDC27-212ENST00000570818 TRIM52Q96A61 297 aa12.8□□□□□ -0.36
CDC27-212ENST00000570818 PCDHB9Q9Y5E1 797 aa12.8□□□□□ -0.36
CDC27-212ENST00000570818 CCDC116Q8IYX3 515 aa12.79□□□□□ -0.36
CDC27-212ENST00000570818 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
CDC27-212ENST00000570818 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
CDC27-212ENST00000570818 ABL2P42684 1182 aa12.77□□□□□ -0.37
CDC27-212ENST00000570818 PGPEP1Q9NXJ5 209 aa12.77□□□□□ -0.37
CDC27-212ENST00000570818 ZIC2O95409 532 aaPredicted RBP12.76□□□□□ -0.37
CDC27-212ENST00000570818 NR3C2P08235 984 aa12.76□□□□□ -0.37
CDC27-212ENST00000570818 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
CDC27-212ENST00000570818 WASHC4Q2M389 1173 aa12.76□□□□□ -0.37
CDC27-212ENST00000570818 GPR37L1O60883 481 aa12.75□□□□□ -0.37
CDC27-212ENST00000570818 EIF4G2P78344 907 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDC27-212ENST00000570818 SEPT12Q8IYM1 358 aa12.75□□□□□ -0.37
CDC27-212ENST00000570818 TIMP2P16035 220 aa12.74□□□□□ -0.37
CDC27-212ENST00000570818 CCDC125Q86Z20 511 aa12.74□□□□□ -0.37
CDC27-212ENST00000570818 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
CDC27-212ENST00000570818 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
CDC27-212ENST00000570818 ATP13A2Q9NQ11 1180 aa12.73□□□□□ -0.37
CDC27-212ENST00000570818 PPP1R26Q5T8A7 1209 aaPredicted RBP12.72□□□□□ -0.37
CDC27-212ENST00000570818 RNF20Q5VTR2 975 aa12.72□□□□□ -0.37
CDC27-212ENST00000570818 ZNF787Q6DD87 383 aa12.72□□□□□ -0.37
CDC27-212ENST00000570818 ITPKCQ96DU7 683 aa12.72□□□□□ -0.37
CDC27-212ENST00000570818 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
CDC27-212ENST00000570818 COG6Q9Y2V7 657 aa12.72□□□□□ -0.37
CDC27-212ENST00000570818 UPP2O95045 317 aa12.7□□□□□ -0.38
CDC27-212ENST00000570818 RAB15P59190 212 aa12.7□□□□□ -0.38
CDC27-212ENST00000570818 IRF5Q13568 498 aa12.7□□□□□ -0.38
CDC27-212ENST00000570818 SCARF1Q14162 830 aa12.7□□□□□ -0.38
CDC27-212ENST00000570818 ESPNB1AK53 854 aa12.69□□□□□ -0.38
CDC27-212ENST00000570818 ZFAND3Q9H8U3 227 aa12.69□□□□□ -0.38
CDC27-212ENST00000570818 DACH1Q9UI36 760 aa12.69□□□□□ -0.38
CDC27-212ENST00000570818 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
CDC27-212ENST00000570818 GIGYF1O75420 1035 aaPredicted RBP12.66□□□□□ -0.38
CDC27-212ENST00000570818 SOX11P35716 441 aa12.66□□□□□ -0.38
CDC27-212ENST00000570818 VAC14Q08AM6 782 aa12.66□□□□□ -0.38
CDC27-212ENST00000570818 MRPL14Q6P1L8 145 aaKnown RBP12.66□□□□□ -0.38
CDC27-212ENST00000570818 C11orf95C9JLR9 678 aaPredicted RBP12.65□□□□□ -0.38
CDC27-212ENST00000570818 BMP1P13497 986 aa12.65□□□□□ -0.38
CDC27-212ENST00000570818 GMPR2Q9P2T1 348 aaKnown RBP12.65□□□□□ -0.38
CDC27-212ENST00000570818 ERVH48-1M5A8F1 160 aa12.64□□□□□ -0.39
CDC27-212ENST00000570818 MEIOBQ8N635 442 aa12.64□□□□□ -0.39
CDC27-212ENST00000570818 SEMA3FQ13275 785 aa12.63□□□□□ -0.39
CDC27-212ENST00000570818 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
CDC27-212ENST00000570818 TRIM46Q7Z4K8 759 aa12.62□□□□□ -0.39
CDC27-212ENST00000570818 POM121Q96HA1 1249 aa12.62□□□□□ -0.39
CDC27-212ENST00000570818 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
CDC27-212ENST00000570818 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
CDC27-212ENST00000570818 CEP126Q9P2H0 1117 aa12.61□□□□□ -0.39
CDC27-212ENST00000570818 SLFNL1Q499Z3 407 aa12.6□□□□□ -0.39
CDC27-212ENST00000570818 LINC00528Q8N1L1 170 aa12.6□□□□□ -0.39
CDC27-212ENST00000570818 ZNF784Q8NCA9 323 aaPredicted RBP12.6□□□□□ -0.39
CDC27-212ENST00000570818 PURBQ96QR8 312 aaKnown RBP12.6□□□□□ -0.39
CDC27-212ENST00000570818 TMPRSS4Q9NRS4 437 aa12.6□□□□□ -0.39
CDC27-212ENST00000570818 BMP2P12643 396 aa12.59□□□□□ -0.39
CDC27-212ENST00000570818 Q6ZVU0 165 aa12.59□□□□□ -0.39
CDC27-212ENST00000570818 ZFP42Q96MM3 310 aa12.59□□□□□ -0.39
CDC27-212ENST00000570818 POTECB2RU33 542 aa12.58□□□□□ -0.4
CDC27-212ENST00000570818 CBLBQ13191 982 aa12.57□□□□□ -0.4
CDC27-212ENST00000570818 C6orf118Q5T5N4 469 aa12.57□□□□□ -0.4
CDC27-212ENST00000570818 PCDHB11Q9Y5F2 797 aa12.57□□□□□ -0.4
CDC27-212ENST00000570818 RNF135Q8IUD6 432 aa12.55□□□□□ -0.4
CDC27-212ENST00000570818 CYLDQ9NQC7 956 aa12.55□□□□□ -0.4
CDC27-212ENST00000570818 ADH1AP07327 375 aa12.54□□□□□ -0.4
CDC27-212ENST00000570818 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
CDC27-212ENST00000570818 PROSER2Q86WR7 435 aaPredicted RBP12.54□□□□□ -0.4
CDC27-212ENST00000570818 MYCP01106 439 aaPredicted RBP12.53□□□□□ -0.4
CDC27-212ENST00000570818 CLUAP1Q96AJ1 413 aa12.53□□□□□ -0.4
CDC27-212ENST00000570818 LILRA1O75019 489 aa12.52□□□□□ -0.41
CDC27-212ENST00000570818 ERVK-9P63128 1117 aa12.52□□□□□ -0.41
CDC27-212ENST00000570818 RELBQ01201 579 aa12.52□□□□□ -0.41
CDC27-212ENST00000570818 A6NJR5 290 aa12.51□□□□□ -0.41
CDC27-212ENST00000570818 SNRPBP14678 240 aaKnown RBP12.51□□□□□ -0.41
CDC27-212ENST00000570818 DOLKQ9UPQ8 538 aa12.51□□□□□ -0.41
CDC27-212ENST00000570818 CYP2U1Q7Z449 544 aa12.5□□□□□ -0.41
CDC27-212ENST00000570818 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
CDC27-212ENST00000570818 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
CDC27-212ENST00000570818 SPINT1O43278 529 aa12.49□□□□□ -0.41
CDC27-212ENST00000570818 MAN1A2O60476 641 aa12.49□□□□□ -0.41
CDC27-212ENST00000570818 ADD1P35611 737 aaKnown RBP12.49□□□□□ -0.41
CDC27-212ENST00000570818 MAP7D1Q3KQU3 841 aa12.49□□□□□ -0.41
CDC27-212ENST00000570818 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
CDC27-212ENST00000570818 USP4Q13107 963 aa12.48□□□□□ -0.41
CDC27-212ENST00000570818 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
CDC27-212ENST00000570818 ALG2Q9H553 416 aa12.48□□□□□ -0.41
CDC27-212ENST00000570818 PTGIRP43119 386 aa12.47□□□□□ -0.41
CDC27-212ENST00000570818 PHTF2Q8N3S3 785 aa12.47□□□□□ -0.41
CDC27-212ENST00000570818 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
CDC27-212ENST00000570818 TTLL8A6PVC2 850 aa12.46□□□□□ -0.41
CDC27-212ENST00000570818 ZNF395Q9H8N7 513 aaPredicted RBP12.45□□□□□ -0.42
CDC27-212ENST00000570818 POLMQ9NP87 494 aaPredicted RBP12.45□□□□□ -0.42
CDC27-212ENST00000570818 SOS2Q07890 1332 aaPredicted RBP12.44□□□□□ -0.42
CDC27-212ENST00000570818 SCTRP47872 440 aa12.44□□□□□ -0.42
CDC27-212ENST00000570818 OXLD1Q5BKU9 147 aa12.44□□□□□ -0.42
CDC27-212ENST00000570818 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
CDC27-212ENST00000570818 PLPP7Q8NBV4 271 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms