RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 KCNA6P17658 529 aa13.13□□□□□ -0.31
RBFOX1-220ENST00000570188 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
RBFOX1-220ENST00000570188 TERF2IPQ9NYB0 399 aa13.13□□□□□ -0.31
RBFOX1-220ENST00000570188 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
RBFOX1-220ENST00000570188 NSD2O96028 1365 aa13.12□□□□□ -0.31
RBFOX1-220ENST00000570188 HDGFL2Q7Z4V5 671 aaPredicted RBP13.12□□□□□ -0.31
RBFOX1-220ENST00000570188 CGNL1Q0VF96 1302 aa13.12□□□□□ -0.31
RBFOX1-220ENST00000570188 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-220ENST00000570188 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-220ENST00000570188 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
RBFOX1-220ENST00000570188 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
RBFOX1-220ENST00000570188 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
RBFOX1-220ENST00000570188 FAM9BQ8IZU0 186 aa13.1□□□□□ -0.31
RBFOX1-220ENST00000570188 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
RBFOX1-220ENST00000570188 PRR36Q9H6K5 1346 aa13.1□□□□□ -0.31
RBFOX1-220ENST00000570188 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
RBFOX1-220ENST00000570188 PPP2R1AP30153 589 aa13.09□□□□□ -0.31
RBFOX1-220ENST00000570188 HSPA2P54652 639 aa13.09□□□□□ -0.31
RBFOX1-220ENST00000570188 CPSF1Q10570 1443 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-220ENST00000570188 ADGRL3Q9HAR2 1447 aa13.08□□□□□ -0.32
RBFOX1-220ENST00000570188 TMEM132AQ24JP5 1023 aa13.08□□□□□ -0.32
RBFOX1-220ENST00000570188 ANKARQ7Z5J8 1434 aa13.07□□□□□ -0.32
RBFOX1-220ENST00000570188 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
RBFOX1-220ENST00000570188 EDC4Q6P2E9 1401 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-220ENST00000570188 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
RBFOX1-220ENST00000570188 GTF3C3Q9Y5Q9 886 aa13.06□□□□□ -0.32
RBFOX1-220ENST00000570188 MAP2P11137 1827 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-220ENST00000570188 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-220ENST00000570188 NUTM2FA1L443 756 aa13.05□□□□□ -0.32
RBFOX1-220ENST00000570188 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
RBFOX1-220ENST00000570188 TIE1P35590 1138 aa13.05□□□□□ -0.32
RBFOX1-220ENST00000570188 HNRNPUQ00839 825 aaKnown RBP eCLIP13.05□□□□□ -0.32
RBFOX1-220ENST00000570188 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
RBFOX1-220ENST00000570188 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
RBFOX1-220ENST00000570188 ARIH1Q9Y4X5 557 aaPredicted RBP13.05□□□□□ -0.32
RBFOX1-220ENST00000570188 PLEKHG3A1L390 1219 aa13.02□□□□□ -0.33
RBFOX1-220ENST00000570188 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.33
RBFOX1-220ENST00000570188 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
RBFOX1-220ENST00000570188 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
RBFOX1-220ENST00000570188 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.33
RBFOX1-220ENST00000570188 ACEP12821 1306 aa13.02□□□□□ -0.33
RBFOX1-220ENST00000570188 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
RBFOX1-220ENST00000570188 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-220ENST00000570188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.01□□□□□ -0.33
RBFOX1-220ENST00000570188 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
RBFOX1-220ENST00000570188 BMP2KQ9NSY1 1161 aaPredicted RBP13.01□□□□□ -0.33
RBFOX1-220ENST00000570188 USP6P35125 1406 aa13.01□□□□□ -0.33
RBFOX1-220ENST00000570188 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
RBFOX1-220ENST00000570188 PIK3C2AO00443 1686 aa13□□□□□ -0.33
RBFOX1-220ENST00000570188 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
RBFOX1-220ENST00000570188 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
RBFOX1-220ENST00000570188 FYB1O15117 783 aa13□□□□□ -0.33
RBFOX1-220ENST00000570188 PROSER2Q86WR7 435 aaPredicted RBP13□□□□□ -0.33
RBFOX1-220ENST00000570188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13□□□□□ -0.33
RBFOX1-220ENST00000570188 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
RBFOX1-220ENST00000570188 INSRP06213 1382 aa12.99□□□□□ -0.33
RBFOX1-220ENST00000570188 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
RBFOX1-220ENST00000570188 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
RBFOX1-220ENST00000570188 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
RBFOX1-220ENST00000570188 ZBED9Q6R2W3 1325 aa12.97□□□□□ -0.33
RBFOX1-220ENST00000570188 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
RBFOX1-220ENST00000570188 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
RBFOX1-220ENST00000570188 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
RBFOX1-220ENST00000570188 NME9Q86XW9 330 aa12.97□□□□□ -0.33
RBFOX1-220ENST00000570188 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
RBFOX1-220ENST00000570188 SSH2Q76I76 1423 aa12.96□□□□□ -0.33
RBFOX1-220ENST00000570188 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.33
RBFOX1-220ENST00000570188 TMEM94Q12767 1356 aa12.96□□□□□ -0.33
RBFOX1-220ENST00000570188 CFAP53Q96M91 514 aa12.96□□□□□ -0.33
RBFOX1-220ENST00000570188 COL3A1P02461 1466 aaPredicted RBP12.96□□□□□ -0.34
RBFOX1-220ENST00000570188 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.34
RBFOX1-220ENST00000570188 DCCP43146 1447 aa12.96□□□□□ -0.34
RBFOX1-220ENST00000570188 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.34
RBFOX1-220ENST00000570188 MTHFSP49914 203 aa12.95□□□□□ -0.34
RBFOX1-220ENST00000570188 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
RBFOX1-220ENST00000570188 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
RBFOX1-220ENST00000570188 TRPM3Q9HCF6 1732 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-220ENST00000570188 COG3Q96JB2 828 aa12.94□□□□□ -0.34
RBFOX1-220ENST00000570188 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
RBFOX1-220ENST00000570188 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
RBFOX1-220ENST00000570188 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-220ENST00000570188 ZMYND10O75800 440 aa12.93□□□□□ -0.34
RBFOX1-220ENST00000570188 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
RBFOX1-220ENST00000570188 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-220ENST00000570188 C1orf167Q5SNV9 1468 aa12.92□□□□□ -0.34
RBFOX1-220ENST00000570188 CDK12Q9NYV4 1490 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-220ENST00000570188 LTN1O94822 1766 aa12.92□□□□□ -0.34
RBFOX1-220ENST00000570188 MST1RQ04912 1400 aa12.92□□□□□ -0.34
RBFOX1-220ENST00000570188 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
RBFOX1-220ENST00000570188 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
RBFOX1-220ENST00000570188 MSH6P52701 1360 aa12.92□□□□□ -0.34
RBFOX1-220ENST00000570188 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
RBFOX1-220ENST00000570188 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
RBFOX1-220ENST00000570188 MLLT3P42568 568 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-220ENST00000570188 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
RBFOX1-220ENST00000570188 ZNF335Q9H4Z2 1342 aaPredicted RBP12.9□□□□□ -0.34
RBFOX1-220ENST00000570188 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
RBFOX1-220ENST00000570188 ATF3P18847 181 aa12.9□□□□□ -0.34
RBFOX1-220ENST00000570188 NEUROD2Q15784 382 aa12.9□□□□□ -0.34
RBFOX1-220ENST00000570188 USP31Q70CQ4 1352 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms