RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 VEGFBP49765 207 aa12.57□□□□□ -0.4
SNX29-208ENST00000569801 PXDNLA1KZ92 1463 aa12.57□□□□□ -0.4
SNX29-208ENST00000569801 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
SNX29-208ENST00000569801 NUP155O75694 1391 aa12.56□□□□□ -0.4
SNX29-208ENST00000569801 EVA1CP58658 441 aa12.56□□□□□ -0.4
SNX29-208ENST00000569801 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
SNX29-208ENST00000569801 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
SNX29-208ENST00000569801 KCPQ6ZWJ8 1503 aa12.55□□□□□ -0.4
SNX29-208ENST00000569801 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
SNX29-208ENST00000569801 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
SNX29-208ENST00000569801 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
SNX29-208ENST00000569801 TOPAZ1Q8N9V7 1692 aa12.53□□□□□ -0.4
SNX29-208ENST00000569801 NRXN3Q9Y4C0 1643 aa12.52□□□□□ -0.4
SNX29-208ENST00000569801 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.41
SNX29-208ENST00000569801 MSL1Q68DK7 614 aa12.51□□□□□ -0.41
SNX29-208ENST00000569801 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
SNX29-208ENST00000569801 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
SNX29-208ENST00000569801 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
SNX29-208ENST00000569801 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
SNX29-208ENST00000569801 NAIPQ13075 1403 aa12.51□□□□□ -0.41
SNX29-208ENST00000569801 ATP7BP35670 1465 aa12.51□□□□□ -0.41
SNX29-208ENST00000569801 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
SNX29-208ENST00000569801 MNX1P50219 401 aaPredicted RBP12.5□□□□□ -0.41
SNX29-208ENST00000569801 MAP2K1Q02750 393 aaPredicted RBP12.5□□□□□ -0.41
SNX29-208ENST00000569801 ARHGAP27Q6ZUM4 889 aa12.5□□□□□ -0.41
SNX29-208ENST00000569801 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
SNX29-208ENST00000569801 HFM1A2PYH4 1435 aa12.5□□□□□ -0.41
SNX29-208ENST00000569801 COL24A1Q17RW2 1714 aa12.5□□□□□ -0.41
SNX29-208ENST00000569801 SSH2Q76I76 1423 aa12.48□□□□□ -0.41
SNX29-208ENST00000569801 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
SNX29-208ENST00000569801 DDB1Q16531 1140 aa12.48□□□□□ -0.41
SNX29-208ENST00000569801 MARCH10Q8NA82 808 aaPredicted RBP12.48□□□□□ -0.41
SNX29-208ENST00000569801 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
SNX29-208ENST00000569801 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
SNX29-208ENST00000569801 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
SNX29-208ENST00000569801 MSH5O43196 834 aa12.47□□□□□ -0.41
SNX29-208ENST00000569801 DGKZQ13574 1117 aa12.47□□□□□ -0.41
SNX29-208ENST00000569801 CLTCL1P53675 1640 aa12.47□□□□□ -0.41
SNX29-208ENST00000569801 CICQ96RK0 1608 aaPredicted RBP12.47□□□□□ -0.41
SNX29-208ENST00000569801 CACNA1AO00555 2505 aa12.47□□□□□ -0.41
SNX29-208ENST00000569801 CDC42BPGQ6DT37 1551 aa12.47□□□□□ -0.41
SNX29-208ENST00000569801 VEGFAP15692 232 aaPredicted RBP12.44□□□□□ -0.42
SNX29-208ENST00000569801 BCL9O00512 1426 aa12.44□□□□□ -0.42
SNX29-208ENST00000569801 KIF1BO60333 1816 aa12.43□□□□□ -0.42
SNX29-208ENST00000569801 SBF2Q86WG5 1849 aa12.43□□□□□ -0.42
SNX29-208ENST00000569801 HIRIP3Q9BW71 556 aaPredicted RBP12.42□□□□□ -0.42
SNX29-208ENST00000569801 TSKSQ9UJT2 592 aa12.42□□□□□ -0.42
SNX29-208ENST00000569801 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
SNX29-208ENST00000569801 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
SNX29-208ENST00000569801 BCS1LQ9Y276 419 aa12.41□□□□□ -0.42
SNX29-208ENST00000569801 MEGF6O75095 1541 aa12.41□□□□□ -0.42
SNX29-208ENST00000569801 COL23A1Q86Y22 540 aaPredicted RBP12.4□□□□□ -0.42
SNX29-208ENST00000569801 BEGAINQ9BUH8 593 aa12.4□□□□□ -0.42
SNX29-208ENST00000569801 KIF1AQ12756 1690 aa12.39□□□□□ -0.43
SNX29-208ENST00000569801 ZNF326Q5BKZ1 582 aaKnown RBP12.39□□□□□ -0.43
SNX29-208ENST00000569801 RNF181Q9P0P0 153 aa12.39□□□□□ -0.43
SNX29-208ENST00000569801 PARP4Q9UKK3 1724 aaKnown RBP12.37□□□□□ -0.43
SNX29-208ENST00000569801 COL25A1Q9BXS0 654 aaPredicted RBP12.37□□□□□ -0.43
SNX29-208ENST00000569801 SNX27Q96L92 541 aa12.36□□□□□ -0.43
SNX29-208ENST00000569801 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
SNX29-208ENST00000569801 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
SNX29-208ENST00000569801 PPLO60437 1756 aa12.35□□□□□ -0.43
SNX29-208ENST00000569801 WAPLQ7Z5K2 1190 aa12.35□□□□□ -0.43
SNX29-208ENST00000569801 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
SNX29-208ENST00000569801 PRDM6Q9NQX0 595 aa12.35□□□□□ -0.43
SNX29-208ENST00000569801 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
SNX29-208ENST00000569801 KCNQ4P56696 695 aa12.34□□□□□ -0.43
SNX29-208ENST00000569801 NRXN1Q9ULB1 1477 aa12.34□□□□□ -0.43
SNX29-208ENST00000569801 TMEM88BA6NKF7 163 aa12.33□□□□□ -0.44
SNX29-208ENST00000569801 DEFB115Q30KQ5 88 aa12.33□□□□□ -0.44
SNX29-208ENST00000569801 SLC27A3Q5K4L6 730 aa12.33□□□□□ -0.44
SNX29-208ENST00000569801 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
SNX29-208ENST00000569801 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
SNX29-208ENST00000569801 COL9A1P20849 921 aa12.32□□□□□ -0.44
SNX29-208ENST00000569801 RPGRIP1LQ68CZ1 1315 aa12.31□□□□□ -0.44
SNX29-208ENST00000569801 PRR36Q9H6K5 1346 aa12.31□□□□□ -0.44
SNX29-208ENST00000569801 IFT172Q9UG01 1749 aa12.31□□□□□ -0.44
SNX29-208ENST00000569801 RASSF10A6NK89 507 aa12.3□□□□□ -0.44
SNX29-208ENST00000569801 FCHSD2O94868 740 aa12.3□□□□□ -0.44
SNX29-208ENST00000569801 SPATA31E1Q6ZUB1 1445 aa12.29□□□□□ -0.44
SNX29-208ENST00000569801 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
SNX29-208ENST00000569801 VGFO15240 615 aaPredicted RBP12.29□□□□□ -0.44
SNX29-208ENST00000569801 PLA2G5P39877 138 aa12.29□□□□□ -0.44
SNX29-208ENST00000569801 MPHOSPH9Q99550 1183 aa12.29□□□□□ -0.44
SNX29-208ENST00000569801 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
SNX29-208ENST00000569801 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
SNX29-208ENST00000569801 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
SNX29-208ENST00000569801 POTECB2RU33 542 aa12.28□□□□□ -0.44
SNX29-208ENST00000569801 PASKQ96RG2 1323 aa12.28□□□□□ -0.44
SNX29-208ENST00000569801 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
SNX29-208ENST00000569801 VIRMAQ69YN4 1812 aaKnown RBP12.27□□□□□ -0.44
SNX29-208ENST00000569801 A0A0G2JLW4 131 aa12.27□□□□□ -0.45
SNX29-208ENST00000569801 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
SNX29-208ENST00000569801 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
SNX29-208ENST00000569801 SZT2Q5T011 3432 aa12.27□□□□□ -0.45
SNX29-208ENST00000569801 ANKRD30BQ9BXX2 1392 aa12.27□□□□□ -0.45
SNX29-208ENST00000569801 USP6P35125 1406 aa12.26□□□□□ -0.45
SNX29-208ENST00000569801 CRB1P82279 1406 aa12.26□□□□□ -0.45
SNX29-208ENST00000569801 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
SNX29-208ENST00000569801 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms