RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 KIF20BQ96Q89 1820 aa17.77■□□□□ 0.43
CNEP1R1-211ENST00000569647 NSD3Q9BZ95 1437 aa17.76■□□□□ 0.43
CNEP1R1-211ENST00000569647 LARP1Q6PKG0 1096 aaKnown RBP17.75■□□□□ 0.43
CNEP1R1-211ENST00000569647 NFAT5O94916 1531 aa17.75■□□□□ 0.43
CNEP1R1-211ENST00000569647 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
CNEP1R1-211ENST00000569647 PANK3Q9H999 370 aa17.74■□□□□ 0.43
CNEP1R1-211ENST00000569647 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
CNEP1R1-211ENST00000569647 AATKQ6ZMQ8 1374 aa17.74■□□□□ 0.43
CNEP1R1-211ENST00000569647 RGPD1P0DJD0 1748 aa17.73■□□□□ 0.43
CNEP1R1-211ENST00000569647 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
CNEP1R1-211ENST00000569647 LTN1O94822 1766 aa17.73■□□□□ 0.43
CNEP1R1-211ENST00000569647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.72■□□□□ 0.43
CNEP1R1-211ENST00000569647 KCNH5Q8NCM2 988 aa17.72■□□□□ 0.43
CNEP1R1-211ENST00000569647 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
CNEP1R1-211ENST00000569647 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
CNEP1R1-211ENST00000569647 ANKRD26Q9UPS8 1709 aa17.72■□□□□ 0.43
CNEP1R1-211ENST00000569647 USP31Q70CQ4 1352 aa17.71■□□□□ 0.43
CNEP1R1-211ENST00000569647 SOX12O15370 315 aa17.71■□□□□ 0.43
CNEP1R1-211ENST00000569647 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
CNEP1R1-211ENST00000569647 BARGINQ6ZT62 677 aa17.71■□□□□ 0.43
CNEP1R1-211ENST00000569647 ARHGEF25Q86VW2 580 aa17.71■□□□□ 0.43
CNEP1R1-211ENST00000569647 ZRANB1Q9UGI0 708 aa17.71■□□□□ 0.43
CNEP1R1-211ENST00000569647 OVOS2A0A0J9YW53 1432 aa17.71■□□□□ 0.43
CNEP1R1-211ENST00000569647 OVOS2Q6IE36 1432 aa17.71■□□□□ 0.43
CNEP1R1-211ENST00000569647 TNS1Q9HBL0 1735 aaKnown RBP17.7■□□□□ 0.42
CNEP1R1-211ENST00000569647 NME9Q86XW9 330 aa17.7■□□□□ 0.42
CNEP1R1-211ENST00000569647 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
CNEP1R1-211ENST00000569647 CRB1P82279 1406 aa17.7■□□□□ 0.42
CNEP1R1-211ENST00000569647 ABCC6O95255 1503 aa17.69■□□□□ 0.42
CNEP1R1-211ENST00000569647 SF3B2Q13435 895 aaKnown RBP17.69■□□□□ 0.42
CNEP1R1-211ENST00000569647 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
CNEP1R1-211ENST00000569647 PER1O15534 1290 aaPredicted RBP17.68■□□□□ 0.42
CNEP1R1-211ENST00000569647 DEFB132Q7Z7B7 95 aa17.68■□□□□ 0.42
CNEP1R1-211ENST00000569647 THRAP3Q9Y2W1 955 aaKnown RBP17.68■□□□□ 0.42
CNEP1R1-211ENST00000569647 FYB1O15117 783 aa17.67■□□□□ 0.42
CNEP1R1-211ENST00000569647 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
CNEP1R1-211ENST00000569647 WDR17Q8IZU2 1322 aa17.66■□□□□ 0.42
CNEP1R1-211ENST00000569647 LRRC37A3O60309 1634 aa17.65■□□□□ 0.42
CNEP1R1-211ENST00000569647 NSD2O96028 1365 aa17.65■□□□□ 0.42
CNEP1R1-211ENST00000569647 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
CNEP1R1-211ENST00000569647 TOM1L2Q6ZVM7 507 aa17.64■□□□□ 0.41
CNEP1R1-211ENST00000569647 KNSTRNQ9Y448 316 aa17.64■□□□□ 0.41
CNEP1R1-211ENST00000569647 SBF2Q86WG5 1849 aa17.63■□□□□ 0.41
CNEP1R1-211ENST00000569647 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
CNEP1R1-211ENST00000569647 PDE3BQ13370 1112 aa17.63■□□□□ 0.41
CNEP1R1-211ENST00000569647 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
CNEP1R1-211ENST00000569647 GGNBP2Q9H3C7 697 aa17.63■□□□□ 0.41
CNEP1R1-211ENST00000569647 NPC1L1Q9UHC9 1359 aa17.63■□□□□ 0.41
CNEP1R1-211ENST00000569647 PEAK1Q9H792 1746 aa17.62■□□□□ 0.41
CNEP1R1-211ENST00000569647 BAG6P46379 1132 aa17.62■□□□□ 0.41
CNEP1R1-211ENST00000569647 COG3Q96JB2 828 aa17.61■□□□□ 0.41
CNEP1R1-211ENST00000569647 DISP2A7MBM2 1401 aa17.61■□□□□ 0.41
CNEP1R1-211ENST00000569647 TRIM37O94972 964 aa17.59■□□□□ 0.41
CNEP1R1-211ENST00000569647 CSB-PGBD3P0DP91 1061 aa17.59■□□□□ 0.41
CNEP1R1-211ENST00000569647 CARD10Q9BWT7 1032 aa17.59■□□□□ 0.41
CNEP1R1-211ENST00000569647 EN1Q05925 392 aaPredicted RBP17.58■□□□□ 0.4
CNEP1R1-211ENST00000569647 ERBB3P21860 1342 aa17.57■□□□□ 0.4
CNEP1R1-211ENST00000569647 DDB1Q16531 1140 aa17.57■□□□□ 0.4
CNEP1R1-211ENST00000569647 FAM208AQ9UK61 1670 aaKnown RBP17.57■□□□□ 0.4
CNEP1R1-211ENST00000569647 OVOS2A0A0G2JMS6 1433 aa17.56■□□□□ 0.4
CNEP1R1-211ENST00000569647 CDCA7Q9BWT1 371 aaPredicted RBP17.56■□□□□ 0.4
CNEP1R1-211ENST00000569647 MAP2P11137 1827 aaKnown RBP17.56■□□□□ 0.4
CNEP1R1-211ENST00000569647 RREB1Q92766 1687 aa17.55■□□□□ 0.4
CNEP1R1-211ENST00000569647 RGPD2P0DJD1 1756 aa17.55■□□□□ 0.4
CNEP1R1-211ENST00000569647 ANKRD24Q8TF21 1146 aa17.54■□□□□ 0.4
CNEP1R1-211ENST00000569647 KAT6BQ8WYB5 2073 aa17.53■□□□□ 0.4
CNEP1R1-211ENST00000569647 EZH2Q15910 746 aaKnown RBP17.53■□□□□ 0.4
CNEP1R1-211ENST00000569647 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
CNEP1R1-211ENST00000569647 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
CNEP1R1-211ENST00000569647 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.4
CNEP1R1-211ENST00000569647 APBA3O96018 575 aa17.52■□□□□ 0.4
CNEP1R1-211ENST00000569647 FBLN1P23142 703 aa17.52■□□□□ 0.4
CNEP1R1-211ENST00000569647 IP6K1Q92551 441 aa17.52■□□□□ 0.4
CNEP1R1-211ENST00000569647 CAMKK2Q96RR4 588 aa17.52■□□□□ 0.4
CNEP1R1-211ENST00000569647 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
CNEP1R1-211ENST00000569647 TNS2Q63HR2 1409 aa17.52■□□□□ 0.4
CNEP1R1-211ENST00000569647 MAP3K19Q56UN5 1328 aa17.51■□□□□ 0.39
CNEP1R1-211ENST00000569647 RGPD3A6NKT7 1758 aaPredicted RBP17.51■□□□□ 0.39
CNEP1R1-211ENST00000569647 RGPD4Q7Z3J3 1758 aa17.51■□□□□ 0.39
CNEP1R1-211ENST00000569647 SMG6Q86US8 1419 aaKnown RBP17.51■□□□□ 0.39
CNEP1R1-211ENST00000569647 MARCH10Q8NA82 808 aaPredicted RBP17.51■□□□□ 0.39
CNEP1R1-211ENST00000569647 PARD3Q8TEW0 1356 aa17.51■□□□□ 0.39
CNEP1R1-211ENST00000569647 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
CNEP1R1-211ENST00000569647 BCL9O00512 1426 aa17.49■□□□□ 0.39
CNEP1R1-211ENST00000569647 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
CNEP1R1-211ENST00000569647 KIF24Q5T7B8 1368 aa17.49■□□□□ 0.39
CNEP1R1-211ENST00000569647 EXOC5O00471 708 aa17.48■□□□□ 0.39
CNEP1R1-211ENST00000569647 HOXC9P31274 260 aa17.48■□□□□ 0.39
CNEP1R1-211ENST00000569647 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
CNEP1R1-211ENST00000569647 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
CNEP1R1-211ENST00000569647 PSDA5PKW4 1024 aaPredicted RBP17.47■□□□□ 0.39
CNEP1R1-211ENST00000569647 IL2RBP14784 551 aa17.47■□□□□ 0.39
CNEP1R1-211ENST00000569647 AMPHP49418 695 aa17.47■□□□□ 0.39
CNEP1R1-211ENST00000569647 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
CNEP1R1-211ENST00000569647 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
CNEP1R1-211ENST00000569647 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
CNEP1R1-211ENST00000569647 FLT4P35916 1363 aa17.46■□□□□ 0.39
CNEP1R1-211ENST00000569647 LRP5O75197 1615 aa17.46■□□□□ 0.39
CNEP1R1-211ENST00000569647 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
CNEP1R1-211ENST00000569647 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms