RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.18□□□□□ -0.62
TCF4-241ENST00000568740 WWC1Q8IX03 1113 aa11.18□□□□□ -0.62
TCF4-241ENST00000568740 EXOC6Q8TAG9 804 aa11.18□□□□□ -0.62
TCF4-241ENST00000568740 CPS1P31327 1500 aa11.18□□□□□ -0.62
TCF4-241ENST00000568740 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
TCF4-241ENST00000568740 CEP170BQ9Y4F5 1589 aaPredicted RBP11.17□□□□□ -0.62
TCF4-241ENST00000568740 FAM135BQ49AJ0 1406 aa11.17□□□□□ -0.62
TCF4-241ENST00000568740 MED14O60244 1454 aa11.17□□□□□ -0.62
TCF4-241ENST00000568740 DIAPH1O60610 1272 aaKnown RBP11.17□□□□□ -0.62
TCF4-241ENST00000568740 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
TCF4-241ENST00000568740 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
TCF4-241ENST00000568740 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
TCF4-241ENST00000568740 BCAR3O75815 825 aa11.17□□□□□ -0.62
TCF4-241ENST00000568740 ESCO1Q5FWF5 840 aa11.17□□□□□ -0.62
TCF4-241ENST00000568740 TTC21BQ7Z4L5 1316 aa11.17□□□□□ -0.62
TCF4-241ENST00000568740 SLIT1O75093 1534 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 CERS3Q8IU89 383 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 SIRT1Q96EB6 747 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 PHACTR3Q96KR7 559 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
TCF4-241ENST00000568740 TECPR2O15040 1411 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 ATP7BP35670 1465 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 RRP1P56182 461 aaKnown RBP11.16□□□□□ -0.62
TCF4-241ENST00000568740 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 DDX17Q92841 729 aaKnown RBP11.16□□□□□ -0.62
TCF4-241ENST00000568740 ORAI2Q96SN7 254 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 NINLQ9Y2I6 1382 aa11.16□□□□□ -0.62
TCF4-241ENST00000568740 CPSF1Q10570 1443 aaKnown RBP11.16□□□□□ -0.62
TCF4-241ENST00000568740 HSP90AB2PQ58FF8 381 aa11.15□□□□□ -0.62
TCF4-241ENST00000568740 TSR2Q969E8 191 aaKnown RBP11.15□□□□□ -0.62
TCF4-241ENST00000568740 ZNF521Q96K83 1311 aa11.15□□□□□ -0.62
TCF4-241ENST00000568740 NKTRP30414 1462 aaKnown RBP11.15□□□□□ -0.62
TCF4-241ENST00000568740 PRKAR2BP31323 418 aa11.15□□□□□ -0.62
TCF4-241ENST00000568740 FOXO3O43524 673 aa11.14□□□□□ -0.63
TCF4-241ENST00000568740 NLRP6P59044 892 aa11.14□□□□□ -0.63
TCF4-241ENST00000568740 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
TCF4-241ENST00000568740 SKAP1Q86WV1 359 aa11.14□□□□□ -0.63
TCF4-241ENST00000568740 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
TCF4-241ENST00000568740 PROSER2Q86WR7 435 aaPredicted RBP11.14□□□□□ -0.63
TCF4-241ENST00000568740 LTV1Q96GA3 475 aaPredicted RBP11.14□□□□□ -0.63
TCF4-241ENST00000568740 NSD2O96028 1365 aa11.13□□□□□ -0.63
TCF4-241ENST00000568740 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
TCF4-241ENST00000568740 RIPK4P57078 832 aa11.13□□□□□ -0.63
TCF4-241ENST00000568740 CLUAP1Q96AJ1 413 aa11.13□□□□□ -0.63
TCF4-241ENST00000568740 PPP4R2Q9NY27 417 aa11.13□□□□□ -0.63
TCF4-241ENST00000568740 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
TCF4-241ENST00000568740 ABTB2Q8N961 1025 aa11.12□□□□□ -0.63
TCF4-241ENST00000568740 PLEKHF1Q96S99 279 aa11.12□□□□□ -0.63
TCF4-241ENST00000568740 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.12□□□□□ -0.63
TCF4-241ENST00000568740 EDC4Q6P2E9 1401 aaKnown RBP11.12□□□□□ -0.63
TCF4-241ENST00000568740 DCTN1Q14203 1278 aa11.12□□□□□ -0.63
TCF4-241ENST00000568740 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
TCF4-241ENST00000568740 CCDC136Q96JN2 1154 aa11.12□□□□□ -0.63
TCF4-241ENST00000568740 ADAMTSL3P82987 1691 aa11.12□□□□□ -0.63
TCF4-241ENST00000568740 MAPK8IP3Q9UPT6 1336 aa11.11□□□□□ -0.63
TCF4-241ENST00000568740 FAM83GA6ND36 823 aa11.11□□□□□ -0.63
TCF4-241ENST00000568740 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
TCF4-241ENST00000568740 FRAT1Q92837 279 aaPredicted RBP11.11□□□□□ -0.63
TCF4-241ENST00000568740 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
TCF4-241ENST00000568740 TNNQ9UQP3 1299 aa11.11□□□□□ -0.63
TCF4-241ENST00000568740 IRF5Q13568 498 aa11.1□□□□□ -0.63
TCF4-241ENST00000568740 NPHP4O75161 1426 aaPredicted RBP11.1□□□□□ -0.63
TCF4-241ENST00000568740 ELL2O00472 640 aaPredicted RBP11.1□□□□□ -0.63
TCF4-241ENST00000568740 TCERG1O14776 1098 aaKnown RBP11.1□□□□□ -0.63
TCF4-241ENST00000568740 IL13P35225 146 aa11.1□□□□□ -0.63
TCF4-241ENST00000568740 PSME1Q06323 249 aa11.1□□□□□ -0.63
TCF4-241ENST00000568740 TRIM35Q9UPQ4 493 aa11.1□□□□□ -0.63
TCF4-241ENST00000568740 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
TCF4-241ENST00000568740 RGPD8O14715 1765 aaPredicted RBP11.09□□□□□ -0.63
TCF4-241ENST00000568740 SULT6B1Q6IMI4 303 aa11.09□□□□□ -0.63
TCF4-241ENST00000568740 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
TCF4-241ENST00000568740 PHF8Q9UPP1 1060 aa11.09□□□□□ -0.63
TCF4-241ENST00000568740 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
TCF4-241ENST00000568740 USP6P35125 1406 aa11.09□□□□□ -0.63
TCF4-241ENST00000568740 EIF4A2Q14240 407 aaKnown RBP11.09□□□□□ -0.63
TCF4-241ENST00000568740 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
TCF4-241ENST00000568740 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
TCF4-241ENST00000568740 SETD1BQ9UPS6 1966 aaKnown RBP11.08□□□□□ -0.64
TCF4-241ENST00000568740 AMPHP49418 695 aa11.08□□□□□ -0.64
TCF4-241ENST00000568740 USHBP1Q8N6Y0 703 aa11.08□□□□□ -0.64
TCF4-241ENST00000568740 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
TCF4-241ENST00000568740 CDC42BPGQ6DT37 1551 aa11.07□□□□□ -0.64
TCF4-241ENST00000568740 TRMT2AQ8IZ69 625 aaKnown RBP11.07□□□□□ -0.64
TCF4-241ENST00000568740 PSMD1Q99460 953 aa11.07□□□□□ -0.64
TCF4-241ENST00000568740 PTCH1Q13635 1447 aa11.06□□□□□ -0.64
TCF4-241ENST00000568740 TICAM2Q86XR7 235 aa11.06□□□□□ -0.64
TCF4-241ENST00000568740 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
TCF4-241ENST00000568740 RBM19Q9Y4C8 960 aaKnown RBP11.06□□□□□ -0.64
TCF4-241ENST00000568740 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
TCF4-241ENST00000568740 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
TCF4-241ENST00000568740 PNPLA6Q8IY17 1366 aa11.06□□□□□ -0.64
TCF4-241ENST00000568740 ZMYND10O75800 440 aa11.06□□□□□ -0.64
TCF4-241ENST00000568740 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
TCF4-241ENST00000568740 USP32Q8NFA0 1604 aa11.06□□□□□ -0.64
TCF4-241ENST00000568740 CANXP27824 592 aaKnown RBP11.05□□□□□ -0.64
TCF4-241ENST00000568740 KNDC1Q76NI1 1749 aa11.05□□□□□ -0.64
TCF4-241ENST00000568740 FCHSD2O94868 740 aa11.05□□□□□ -0.64
TCF4-241ENST00000568740 PKNOX2Q96KN3 472 aa11.05□□□□□ -0.64
TCF4-241ENST00000568740 KDM4CQ9H3R0 1056 aa11.05□□□□□ -0.64
TCF4-241ENST00000568740 TRAK2O60296 914 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms