RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 GOLGA6L3A6NEY3 463 aa22.99■■□□□ 1.27
PKD1-235ENST00000568591 RBM42Q9BTD8 480 aaKnown RBP22.98■■□□□ 1.27
PKD1-235ENST00000568591 PNNQ9H307 717 aaKnown RBP22.98■■□□□ 1.27
PKD1-235ENST00000568591 DDIT3P35638 169 aa22.97■■□□□ 1.27
PKD1-235ENST00000568591 DCTN1Q14203 1278 aa22.97■■□□□ 1.27
PKD1-235ENST00000568591 KIF20BQ96Q89 1820 aa22.96■■□□□ 1.27
PKD1-235ENST00000568591 RICTORQ6R327 1708 aa22.96■■□□□ 1.27
PKD1-235ENST00000568591 BMP2KLQ5H9B9 411 aa22.96■■□□□ 1.27
PKD1-235ENST00000568591 C8orf58Q8NAV2 365 aa22.96■■□□□ 1.27
PKD1-235ENST00000568591 RRS1Q15050 365 aaKnown RBP22.96■■□□□ 1.27
PKD1-235ENST00000568591 NCOA3Q9Y6Q9 1424 aa22.95■■□□□ 1.26
PKD1-235ENST00000568591 IL13P35225 146 aa22.95■■□□□ 1.26
PKD1-235ENST00000568591 TBC1D9Q6ZT07 1266 aa22.95■■□□□ 1.26
PKD1-235ENST00000568591 CDC42BPGQ6DT37 1551 aa22.94■■□□□ 1.26
PKD1-235ENST00000568591 BRPF1P55201 1214 aaPredicted RBP22.93■■□□□ 1.26
PKD1-235ENST00000568591 TNPO1Q92973 898 aaKnown RBP22.93■■□□□ 1.26
PKD1-235ENST00000568591 MAP2P11137 1827 aaKnown RBP22.92■■□□□ 1.26
PKD1-235ENST00000568591 TWISTNBQ3B726 338 aaPredicted RBP22.92■■□□□ 1.26
PKD1-235ENST00000568591 HSP90AB1P08238 724 aaKnown RBP22.91■■□□□ 1.26
PKD1-235ENST00000568591 SNX21Q969T3 373 aa22.91■■□□□ 1.26
PKD1-235ENST00000568591 PTCH1Q13635 1447 aa22.91■■□□□ 1.26
PKD1-235ENST00000568591 ZNF853P0CG23 659 aa22.91■■□□□ 1.26
PKD1-235ENST00000568591 IFT57Q9NWB7 429 aa22.9■■□□□ 1.26
PKD1-235ENST00000568591 ABCC4O15439 1325 aa22.9■■□□□ 1.26
PKD1-235ENST00000568591 KRT24Q2M2I5 525 aa22.9■■□□□ 1.26
PKD1-235ENST00000568591 GCC1Q96CN9 775 aa22.9■■□□□ 1.26
PKD1-235ENST00000568591 GNAI1P63096 354 aa22.89■■□□□ 1.26
PKD1-235ENST00000568591 PIK3R4Q99570 1358 aa22.89■■□□□ 1.26
PKD1-235ENST00000568591 ARHGAP45Q92619 1136 aa22.88■■□□□ 1.25
PKD1-235ENST00000568591 ZNF428Q96B54 188 aa22.88■■□□□ 1.25
PKD1-235ENST00000568591 GSPT1P15170 499 aaKnown RBP22.87■■□□□ 1.25
PKD1-235ENST00000568591 TXNDC2Q86VQ3 553 aa22.86■■□□□ 1.25
PKD1-235ENST00000568591 C16orf71Q8IYS4 520 aaPredicted RBP22.86■■□□□ 1.25
PKD1-235ENST00000568591 MLECQ14165 292 aa22.86■■□□□ 1.25
PKD1-235ENST00000568591 ATP7BP35670 1465 aa22.85■■□□□ 1.25
PKD1-235ENST00000568591 DDX11L8A8MPP1 907 aa22.85■■□□□ 1.25
PKD1-235ENST00000568591 AEBP1Q8IUX7 1158 aa22.85■■□□□ 1.25
PKD1-235ENST00000568591 CFAP44Q96MT7 982 aa22.85■■□□□ 1.25
PKD1-235ENST00000568591 GAS2L3Q86XJ1 694 aa22.84■■□□□ 1.25
PKD1-235ENST00000568591 GAS2L2Q8NHY3 880 aa22.84■■□□□ 1.25
PKD1-235ENST00000568591 HSP90AA1P07900 732 aaKnown RBP22.84■■□□□ 1.25
PKD1-235ENST00000568591 WASLO00401 505 aaPredicted RBP22.83■■□□□ 1.25
PKD1-235ENST00000568591 RAB3GAP1Q15042 981 aa22.83■■□□□ 1.25
PKD1-235ENST00000568591 OTUD7AQ8TE49 926 aaPredicted RBP22.83■■□□□ 1.25
PKD1-235ENST00000568591 CPS1P31327 1500 aa22.83■■□□□ 1.25
PKD1-235ENST00000568591 CPSF1Q10570 1443 aaKnown RBP22.83■■□□□ 1.25
PKD1-235ENST00000568591 RIMS2Q9UQ26 1411 aa22.82■■□□□ 1.24
PKD1-235ENST00000568591 KNDC1Q76NI1 1749 aa22.82■■□□□ 1.24
PKD1-235ENST00000568591 CALD1Q05682 793 aaKnown RBP22.82■■□□□ 1.24
PKD1-235ENST00000568591 GRPEL1Q9HAV7 217 aa22.82■■□□□ 1.24
PKD1-235ENST00000568591 METP08581 1390 aa22.82■■□□□ 1.24
PKD1-235ENST00000568591 A2ML1A8K2U0 1454 aa22.81■■□□□ 1.24
PKD1-235ENST00000568591 SSFA2P28290 1259 aa22.81■■□□□ 1.24
PKD1-235ENST00000568591 PLEKHM2Q8IWE5 1019 aa22.81■■□□□ 1.24
PKD1-235ENST00000568591 K7ELQ4 463 aaPredicted RBP22.81■■□□□ 1.24
PKD1-235ENST00000568591 APBB1O00213 710 aa22.81■■□□□ 1.24
PKD1-235ENST00000568591 NUDT16Q96DE0 195 aaKnown RBP22.81■■□□□ 1.24
PKD1-235ENST00000568591 EDC4Q6P2E9 1401 aaKnown RBP22.81■■□□□ 1.24
PKD1-235ENST00000568591 DLG5Q8TDM6 1919 aa22.8■■□□□ 1.24
PKD1-235ENST00000568591 COG3Q96JB2 828 aa22.8■■□□□ 1.24
PKD1-235ENST00000568591 MRE11P49959 708 aa22.79■■□□□ 1.24
PKD1-235ENST00000568591 CDK12Q9NYV4 1490 aaPredicted RBP22.79■■□□□ 1.24
PKD1-235ENST00000568591 RIMBP3CA6NJZ7 1639 aa22.79■■□□□ 1.24
PKD1-235ENST00000568591 RIMBP3BA6NNM3 1639 aa22.79■■□□□ 1.24
PKD1-235ENST00000568591 RIMBP3Q9UFD9 1639 aa22.79■■□□□ 1.24
PKD1-235ENST00000568591 CDC45O75419 566 aa22.78■■□□□ 1.24
PKD1-235ENST00000568591 MCM10Q7L590 875 aa22.78■■□□□ 1.24
PKD1-235ENST00000568591 API5Q9BZZ5 524 aaKnown RBP22.78■■□□□ 1.24
PKD1-235ENST00000568591 SMARCA5O60264 1052 aaPredicted RBP22.77■■□□□ 1.24
PKD1-235ENST00000568591 CHMP4BQ9H444 224 aaKnown RBP22.76■■□□□ 1.23
PKD1-235ENST00000568591 CIZ1Q9ULV3 898 aaPredicted RBP22.76■■□□□ 1.23
PKD1-235ENST00000568591 DLC1Q96QB1 1528 aa22.76■■□□□ 1.23
PKD1-235ENST00000568591 NUTM2FA1L443 756 aa22.76■■□□□ 1.23
PKD1-235ENST00000568591 SULT6B1Q6IMI4 303 aa22.76■■□□□ 1.23
PKD1-235ENST00000568591 DCTPP1Q9H773 170 aa22.76■■□□□ 1.23
PKD1-235ENST00000568591 SETD1AO15047 1707 aaKnown RBP22.76■■□□□ 1.23
PKD1-235ENST00000568591 GBP4Q96PP9 640 aa22.75■■□□□ 1.23
PKD1-235ENST00000568591 ERBB4Q15303 1308 aa22.74■■□□□ 1.23
PKD1-235ENST00000568591 PRR36Q9H6K5 1346 aa22.74■■□□□ 1.23
PKD1-235ENST00000568591 AATKQ6ZMQ8 1374 aa22.74■■□□□ 1.23
PKD1-235ENST00000568591 SOX12O15370 315 aa22.74■■□□□ 1.23
PKD1-235ENST00000568591 CYB5RLQ6IPT4 315 aa22.74■■□□□ 1.23
PKD1-235ENST00000568591 RGS12O14924 1447 aa22.73■■□□□ 1.23
PKD1-235ENST00000568591 LMOD3Q0VAK6 560 aa22.73■■□□□ 1.23
PKD1-235ENST00000568591 EIF4A2Q14240 407 aaKnown RBP22.73■■□□□ 1.23
PKD1-235ENST00000568591 TTC22Q5TAA0 569 aa22.73■■□□□ 1.23
PKD1-235ENST00000568591 MIS18AQ9NYP9 233 aa22.73■■□□□ 1.23
PKD1-235ENST00000568591 CCDC61Q9Y6R9 512 aa22.73■■□□□ 1.23
PKD1-235ENST00000568591 ATP10DQ9P241 1426 aa22.73■■□□□ 1.23
PKD1-235ENST00000568591 MEIS3Q99687 375 aa22.72■■□□□ 1.23
PKD1-235ENST00000568591 FAM69CQ0P6D2 419 aa22.71■■□□□ 1.23
PKD1-235ENST00000568591 PKP1Q13835 747 aa22.71■■□□□ 1.23
PKD1-235ENST00000568591 AK9Q5TCS8 1911 aa22.71■■□□□ 1.23
PKD1-235ENST00000568591 MSH6P52701 1360 aa22.71■■□□□ 1.23
PKD1-235ENST00000568591 INTS3Q68E01 1043 aaKnown RBP22.71■■□□□ 1.23
PKD1-235ENST00000568591 CEP85Q6P2H3 762 aa22.71■■□□□ 1.23
PKD1-235ENST00000568591 NRXN3Q9Y4C0 1643 aa22.7■■□□□ 1.22
PKD1-235ENST00000568591 ANKRD44Q8N8A2 993 aa22.7■■□□□ 1.22
PKD1-235ENST00000568591 HSP90AB2PQ58FF8 381 aa22.69■■□□□ 1.22
PKD1-235ENST00000568591 USP26Q9BXU7 913 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms