RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 NUTM2GQ5VZR2 741 aa10.8□□□□□ -0.68
BBS4-214ENST00000568535 MAP3K19Q56UN5 1328 aa10.8□□□□□ -0.68
BBS4-214ENST00000568535 SENP3-EIF4A1A0A087X0R7 540 aa10.79□□□□□ -0.68
BBS4-214ENST00000568535 SHPRHQ149N8 1683 aa10.79□□□□□ -0.68
BBS4-214ENST00000568535 E9PSI1 815 aa10.78□□□□□ -0.68
BBS4-214ENST00000568535 XPCQ01831 940 aaPredicted RBP10.78□□□□□ -0.68
BBS4-214ENST00000568535 EIF4A2Q14240 407 aaKnown RBP10.78□□□□□ -0.68
BBS4-214ENST00000568535 WDR63Q8IWG1 891 aa10.78□□□□□ -0.68
BBS4-214ENST00000568535 PLEKHF1Q96S99 279 aa10.78□□□□□ -0.68
BBS4-214ENST00000568535 PIK3C2AO00443 1686 aa10.78□□□□□ -0.68
BBS4-214ENST00000568535 RTL1A6NKG5 1358 aa10.77□□□□□ -0.68
BBS4-214ENST00000568535 GCP02774 474 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 NEUROD2Q15784 382 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 HSP90AB2PQ58FF8 381 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 BRINP3Q76B58 766 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 WWC1Q8IX03 1113 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 IP6K1Q92551 441 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 RSPH6AQ9H0K4 717 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 SUPT16HQ9Y5B9 1047 aaKnown RBP10.77□□□□□ -0.69
BBS4-214ENST00000568535 ZNF521Q96K83 1311 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 MAP2P11137 1827 aaKnown RBP10.77□□□□□ -0.69
BBS4-214ENST00000568535 ARHGEF10O15013 1369 aa10.77□□□□□ -0.69
BBS4-214ENST00000568535 HOXC9P31274 260 aa10.76□□□□□ -0.69
BBS4-214ENST00000568535 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
BBS4-214ENST00000568535 TMPOP42166 694 aaKnown RBP10.76□□□□□ -0.69
BBS4-214ENST00000568535 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.69
BBS4-214ENST00000568535 USP54Q70EL1 1684 aa10.76□□□□□ -0.69
BBS4-214ENST00000568535 HMOX1P09601 288 aa10.75□□□□□ -0.69
BBS4-214ENST00000568535 RIPK4P57078 832 aa10.75□□□□□ -0.69
BBS4-214ENST00000568535 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
BBS4-214ENST00000568535 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
BBS4-214ENST00000568535 LMOD3Q0VAK6 560 aa10.75□□□□□ -0.69
BBS4-214ENST00000568535 CDCA7LQ96GN5 454 aa10.75□□□□□ -0.69
BBS4-214ENST00000568535 USP19O94966 1318 aa10.75□□□□□ -0.69
BBS4-214ENST00000568535 SPATA31A3Q5VYP0 1347 aa10.75□□□□□ -0.69
BBS4-214ENST00000568535 SULT6B1Q6IMI4 303 aa10.74□□□□□ -0.69
BBS4-214ENST00000568535 ARHGEF25Q86VW2 580 aa10.74□□□□□ -0.69
BBS4-214ENST00000568535 MYH16Q9H6N6 1097 aa10.74□□□□□ -0.69
BBS4-214ENST00000568535 RRP7AQ9Y3A4 280 aaKnown RBP10.74□□□□□ -0.69
BBS4-214ENST00000568535 TNS3Q68CZ2 1445 aa10.74□□□□□ -0.69
BBS4-214ENST00000568535 NFE2L2Q16236 605 aa10.73□□□□□ -0.69
BBS4-214ENST00000568535 ERICH6BQ5W0A0 696 aa10.73□□□□□ -0.69
BBS4-214ENST00000568535 RCAN3Q9UKA8 241 aa10.73□□□□□ -0.69
BBS4-214ENST00000568535 SOS2Q07890 1332 aaPredicted RBP10.73□□□□□ -0.69
BBS4-214ENST00000568535 ZBTB7CA1YPR0 619 aa10.72□□□□□ -0.69
BBS4-214ENST00000568535 FKBP8Q14318 412 aa10.72□□□□□ -0.69
BBS4-214ENST00000568535 DUSP27Q5VZP5 1158 aa10.72□□□□□ -0.69
BBS4-214ENST00000568535 TRMT2AQ8IZ69 625 aaKnown RBP10.72□□□□□ -0.69
BBS4-214ENST00000568535 DDX17Q92841 729 aaKnown RBP10.72□□□□□ -0.69
BBS4-214ENST00000568535 IL16Q14005 1332 aa10.72□□□□□ -0.69
BBS4-214ENST00000568535 SLIT3O75094 1523 aa10.72□□□□□ -0.69
BBS4-214ENST00000568535 XIRP1Q702N8 1843 aaKnown RBP10.72□□□□□ -0.69
BBS4-214ENST00000568535 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.69
BBS4-214ENST00000568535 PXDNQ92626 1479 aa10.71□□□□□ -0.69
BBS4-214ENST00000568535 EYA1Q99502 592 aa10.71□□□□□ -0.69
BBS4-214ENST00000568535 TRPM3Q9HCF6 1732 aaPredicted RBP10.71□□□□□ -0.69
BBS4-214ENST00000568535 NFAT5O94916 1531 aa10.7□□□□□ -0.7
BBS4-214ENST00000568535 PLEKHG5O94827 1062 aa10.7□□□□□ -0.7
BBS4-214ENST00000568535 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
BBS4-214ENST00000568535 LTV1Q96GA3 475 aaPredicted RBP10.7□□□□□ -0.7
BBS4-214ENST00000568535 PHACTR3Q96KR7 559 aa10.7□□□□□ -0.7
BBS4-214ENST00000568535 PEAK1Q9H792 1746 aa10.7□□□□□ -0.7
BBS4-214ENST00000568535 KDRP35968 1356 aa10.69□□□□□ -0.7
BBS4-214ENST00000568535 CT47B1P0C2W7 299 aaPredicted RBP10.69□□□□□ -0.7
BBS4-214ENST00000568535 ZC3H6P61129 1189 aaKnown RBP10.69□□□□□ -0.7
BBS4-214ENST00000568535 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.69□□□□□ -0.7
BBS4-214ENST00000568535 GAS2L2Q8NHY3 880 aa10.69□□□□□ -0.7
BBS4-214ENST00000568535 LRRC59Q96AG4 307 aaKnown RBP10.69□□□□□ -0.7
BBS4-214ENST00000568535 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
BBS4-214ENST00000568535 RNF123Q5XPI4 1314 aa10.68□□□□□ -0.7
BBS4-214ENST00000568535 AEBP1Q8IUX7 1158 aa10.68□□□□□ -0.7
BBS4-214ENST00000568535 RTF1Q92541 710 aaKnown RBP10.68□□□□□ -0.7
BBS4-214ENST00000568535 ALS2Q96Q42 1657 aa10.68□□□□□ -0.7
BBS4-214ENST00000568535 MARF1Q9Y4F3 1742 aaKnown RBP10.67□□□□□ -0.7
BBS4-214ENST00000568535 HTATSF1O43719 755 aaKnown RBP10.67□□□□□ -0.7
BBS4-214ENST00000568535 GNAI1P63096 354 aa10.67□□□□□ -0.7
BBS4-214ENST00000568535 ANKRD24Q8TF21 1146 aa10.67□□□□□ -0.7
BBS4-214ENST00000568535 CPDO75976 1380 aa10.66□□□□□ -0.7
BBS4-214ENST00000568535 PHRF1Q9P1Y6 1649 aaKnown RBP10.66□□□□□ -0.7
BBS4-214ENST00000568535 DCAF8L1A6NGE4 600 aa10.66□□□□□ -0.7
BBS4-214ENST00000568535 RRP1P56182 461 aaKnown RBP10.66□□□□□ -0.7
BBS4-214ENST00000568535 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
BBS4-214ENST00000568535 SPINK5Q9NQ38 1064 aaPredicted RBP10.66□□□□□ -0.7
BBS4-214ENST00000568535 IFT57Q9NWB7 429 aa10.66□□□□□ -0.7
BBS4-214ENST00000568535 SRCAPQ6ZRS2 3230 aa10.66□□□□□ -0.7
BBS4-214ENST00000568535 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
BBS4-214ENST00000568535 AMOTQ4VCS5 1084 aa10.65□□□□□ -0.7
BBS4-214ENST00000568535 PLEKHO1Q53GL0 409 aaPredicted RBP10.65□□□□□ -0.7
BBS4-214ENST00000568535 NBPF6Q5VWK0 638 aa10.65□□□□□ -0.7
BBS4-214ENST00000568535 NBPF4Q96M43 638 aa10.65□□□□□ -0.7
BBS4-214ENST00000568535 RGPD1P0DJD0 1748 aa10.64□□□□□ -0.71
BBS4-214ENST00000568535 ABCC6O95255 1503 aa10.64□□□□□ -0.71
BBS4-214ENST00000568535 MTHFSDQ2M296 383 aaKnown RBP10.64□□□□□ -0.71
BBS4-214ENST00000568535 CFAP44Q96MT7 982 aa10.64□□□□□ -0.71
BBS4-214ENST00000568535 PRDM11Q9NQV5 511 aa10.64□□□□□ -0.71
BBS4-214ENST00000568535 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
BBS4-214ENST00000568535 LTN1O94822 1766 aa10.64□□□□□ -0.71
BBS4-214ENST00000568535 ERBB3P21860 1342 aa10.63□□□□□ -0.71
BBS4-214ENST00000568535 FANCIQ9NVI1 1328 aa10.63□□□□□ -0.71
BBS4-214ENST00000568535 GNAT3A8MTJ3 354 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms