RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 NRKQ7Z2Y5 1582 aa9.12□□□□□ -0.95
PTPN9-205ENST00000568108 LMO7Q8WWI1 1683 aa9.11□□□□□ -0.95
PTPN9-205ENST00000568108 DCAF8L1A6NGE4 600 aa9.11□□□□□ -0.95
PTPN9-205ENST00000568108 PLSCR1O15162 318 aa9.11□□□□□ -0.95
PTPN9-205ENST00000568108 YY1P25490 414 aa9.11□□□□□ -0.95
PTPN9-205ENST00000568108 AATKQ6ZMQ8 1374 aa9.11□□□□□ -0.95
PTPN9-205ENST00000568108 BCL11BQ9C0K0 894 aaPredicted RBP9.1□□□□□ -0.95
PTPN9-205ENST00000568108 AXIN2Q9Y2T1 843 aa9.1□□□□□ -0.95
PTPN9-205ENST00000568108 KIAA1210Q9ULL0 1709 aa9.1□□□□□ -0.95
PTPN9-205ENST00000568108 EVC2Q86UK5 1308 aa9.09□□□□□ -0.95
PTPN9-205ENST00000568108 OVOS2A0A0G2JMS6 1433 aa9.09□□□□□ -0.95
PTPN9-205ENST00000568108 OVOS2A0A0J9YW53 1432 aa9.09□□□□□ -0.95
PTPN9-205ENST00000568108 USP6P35125 1406 aa9.09□□□□□ -0.95
PTPN9-205ENST00000568108 OVOS2Q6IE36 1432 aa9.09□□□□□ -0.95
PTPN9-205ENST00000568108 PTF1AQ7RTS3 328 aa9.09□□□□□ -0.95
PTPN9-205ENST00000568108 MARCH10Q8NA82 808 aaPredicted RBP9.09□□□□□ -0.95
PTPN9-205ENST00000568108 ZNF692Q9BU19 519 aaPredicted RBP9.09□□□□□ -0.95
PTPN9-205ENST00000568108 CDCA7Q9BWT1 371 aaPredicted RBP9.09□□□□□ -0.95
PTPN9-205ENST00000568108 RREB1Q92766 1687 aa9.09□□□□□ -0.95
PTPN9-205ENST00000568108 WDR17Q8IZU2 1322 aa9.08□□□□□ -0.96
PTPN9-205ENST00000568108 SOX12O15370 315 aa9.08□□□□□ -0.96
PTPN9-205ENST00000568108 CSB-PGBD3P0DP91 1061 aa9.08□□□□□ -0.96
PTPN9-205ENST00000568108 ARHGEF25Q86VW2 580 aa9.08□□□□□ -0.96
PTPN9-205ENST00000568108 KCNH5Q8NCM2 988 aa9.08□□□□□ -0.96
PTPN9-205ENST00000568108 L3MBTL2Q969R5 705 aa9.08□□□□□ -0.96
PTPN9-205ENST00000568108 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
PTPN9-205ENST00000568108 TTC21BQ7Z4L5 1316 aa9.07□□□□□ -0.96
PTPN9-205ENST00000568108 EXOC5O00471 708 aa9.07□□□□□ -0.96
PTPN9-205ENST00000568108 SAMD1Q6SPF0 538 aaPredicted RBP9.07□□□□□ -0.96
PTPN9-205ENST00000568108 PROM2Q8N271 834 aa9.07□□□□□ -0.96
PTPN9-205ENST00000568108 CARD10Q9BWT7 1032 aa9.07□□□□□ -0.96
PTPN9-205ENST00000568108 ANO8Q9HCE9 1232 aaPredicted RBP9.07□□□□□ -0.96
PTPN9-205ENST00000568108 PARP4Q9UKK3 1724 aaKnown RBP9.07□□□□□ -0.96
PTPN9-205ENST00000568108 SLIT3O75094 1523 aa9.06□□□□□ -0.96
PTPN9-205ENST00000568108 PDGFDQ9GZP0 370 aaPredicted RBP9.06□□□□□ -0.96
PTPN9-205ENST00000568108 NINLQ9Y2I6 1382 aa9.06□□□□□ -0.96
PTPN9-205ENST00000568108 ZBTB7AO95365 584 aa9.05□□□□□ -0.96
PTPN9-205ENST00000568108 TXNRD1Q16881 649 aa9.05□□□□□ -0.96
PTPN9-205ENST00000568108 PEAK1Q9H792 1746 aa9.05□□□□□ -0.96
PTPN9-205ENST00000568108 TTC21AQ8NDW8 1320 aa9.05□□□□□ -0.96
PTPN9-205ENST00000568108 SIN3AQ96ST3 1273 aa9.04□□□□□ -0.96
PTPN9-205ENST00000568108 STK32BQ9NY57 414 aa9.04□□□□□ -0.96
PTPN9-205ENST00000568108 ATF5Q9Y2D1 282 aaPredicted RBP9.04□□□□□ -0.96
PTPN9-205ENST00000568108 BCL9O00512 1426 aa9.04□□□□□ -0.96
PTPN9-205ENST00000568108 CPSF1Q10570 1443 aaKnown RBP9.04□□□□□ -0.96
PTPN9-205ENST00000568108 COL18A1P39060 1754 aa9.04□□□□□ -0.96
PTPN9-205ENST00000568108 QRICH2Q9H0J4 1663 aa9.04□□□□□ -0.96
PTPN9-205ENST00000568108 SBF2Q86WG5 1849 aa9.03□□□□□ -0.96
PTPN9-205ENST00000568108 KTN1Q86UP2 1357 aaKnown RBP9.03□□□□□ -0.96
PTPN9-205ENST00000568108 LRRC37A3O60309 1634 aa9.03□□□□□ -0.96
PTPN9-205ENST00000568108 NEUROD1Q13562 356 aa9.03□□□□□ -0.96
PTPN9-205ENST00000568108 SLC15A2Q16348 729 aa9.03□□□□□ -0.96
PTPN9-205ENST00000568108 PIK3C2AO00443 1686 aa9.03□□□□□ -0.96
PTPN9-205ENST00000568108 ROCK2O75116 1388 aaKnown RBP9.02□□□□□ -0.97
PTPN9-205ENST00000568108 CCDC7Q96M83 1385 aa9.02□□□□□ -0.97
PTPN9-205ENST00000568108 PTGER2P43116 358 aa9.02□□□□□ -0.97
PTPN9-205ENST00000568108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPN9-205ENST00000568108 NLRP2Q9NX02 1062 aa9.02□□□□□ -0.97
PTPN9-205ENST00000568108 ACSBG1Q96GR2 724 aa9.01□□□□□ -0.97
PTPN9-205ENST00000568108 SYT17Q9BSW7 474 aa9.01□□□□□ -0.97
PTPN9-205ENST00000568108 RGPD3A6NKT7 1758 aaPredicted RBP9.01□□□□□ -0.97
PTPN9-205ENST00000568108 RGPD4Q7Z3J3 1758 aa9.01□□□□□ -0.97
PTPN9-205ENST00000568108 CLSPNQ9HAW4 1339 aa9.01□□□□□ -0.97
PTPN9-205ENST00000568108 RGPD5Q99666 1765 aa9□□□□□ -0.97
PTPN9-205ENST00000568108 NME9Q86XW9 330 aa9□□□□□ -0.97
PTPN9-205ENST00000568108 TMC1Q8TDI8 760 aa9□□□□□ -0.97
PTPN9-205ENST00000568108 FHDC1Q9C0D6 1143 aaPredicted RBP9□□□□□ -0.97
PTPN9-205ENST00000568108 MTFR1LQ9H019 292 aa9□□□□□ -0.97
PTPN9-205ENST00000568108 TRPM1Q7Z4N2 1603 aa9□□□□□ -0.97
PTPN9-205ENST00000568108 IL2RBP14784 551 aa8.99□□□□□ -0.97
PTPN9-205ENST00000568108 ANKRD24Q8TF21 1146 aa8.99□□□□□ -0.97
PTPN9-205ENST00000568108 U3KPZ7 1027 aaPredicted RBP8.99□□□□□ -0.97
PTPN9-205ENST00000568108 NFAT5O94916 1531 aa8.99□□□□□ -0.97
PTPN9-205ENST00000568108 ERBB3P21860 1342 aa8.99□□□□□ -0.97
PTPN9-205ENST00000568108 AKAP12Q02952 1782 aa8.99□□□□□ -0.97
PTPN9-205ENST00000568108 CASZ1Q86V15 1759 aa8.99□□□□□ -0.97
PTPN9-205ENST00000568108 USP31Q70CQ4 1352 aa8.99□□□□□ -0.97
PTPN9-205ENST00000568108 HDGFL2Q7Z4V5 671 aaPredicted RBP8.98□□□□□ -0.97
PTPN9-205ENST00000568108 ZNF784Q8NCA9 323 aaPredicted RBP8.98□□□□□ -0.97
PTPN9-205ENST00000568108 ARXQ96QS3 562 aa8.98□□□□□ -0.97
PTPN9-205ENST00000568108 SGIP1Q9BQI5 828 aa8.98□□□□□ -0.97
PTPN9-205ENST00000568108 CARD11Q9BXL7 1154 aa8.98□□□□□ -0.97
PTPN9-205ENST00000568108 SLC12A5Q9H2X9 1139 aa8.98□□□□□ -0.97
PTPN9-205ENST00000568108 WNK3Q9BYP7 1800 aa8.98□□□□□ -0.97
PTPN9-205ENST00000568108 TNS2Q63HR2 1409 aa8.97□□□□□ -0.97
PTPN9-205ENST00000568108 KAT6BQ8WYB5 2073 aa8.97□□□□□ -0.97
PTPN9-205ENST00000568108 ABCC6O95255 1503 aa8.96□□□□□ -0.97
PTPN9-205ENST00000568108 DDX54Q8TDD1 881 aaKnown RBP8.96□□□□□ -0.98
PTPN9-205ENST00000568108 LRRC4BQ9NT99 713 aa8.96□□□□□ -0.98
PTPN9-205ENST00000568108 TERF2IPQ9NYB0 399 aa8.96□□□□□ -0.98
PTPN9-205ENST00000568108 MYOM1P52179 1685 aa8.96□□□□□ -0.98
PTPN9-205ENST00000568108 SBNO2Q9Y2G9 1366 aa8.96□□□□□ -0.98
PTPN9-205ENST00000568108 ZNF827Q17R98 1081 aa8.95□□□□□ -0.98
PTPN9-205ENST00000568108 IP6K1Q92551 441 aa8.95□□□□□ -0.98
PTPN9-205ENST00000568108 LTV1Q96GA3 475 aaPredicted RBP8.95□□□□□ -0.98
PTPN9-205ENST00000568108 GPR162Q16538 588 aa8.94□□□□□ -0.98
PTPN9-205ENST00000568108 SLC27A3Q5K4L6 730 aa8.94□□□□□ -0.98
PTPN9-205ENST00000568108 SLC16A10Q8TF71 515 aa8.94□□□□□ -0.98
PTPN9-205ENST00000568108 AKT1S1Q96B36 256 aa8.94□□□□□ -0.98
PTPN9-205ENST00000568108 CD163L1Q9NR16 1453 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms