RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 MAP4K5Q9Y4K4 846 aa8.04□□□□□ -1.12
HERPUD1-212ENST00000567944 J3QL48 77 aa8.03□□□□□ -1.12
HERPUD1-212ENST00000567944 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
HERPUD1-212ENST00000567944 C1orf115Q9H7X2 142 aa8.03□□□□□ -1.12
HERPUD1-212ENST00000567944 PCDHB9Q9Y5E1 797 aa8.03□□□□□ -1.12
HERPUD1-212ENST00000567944 ESPNB1AK53 854 aa8.02□□□□□ -1.13
HERPUD1-212ENST00000567944 SMPD1P17405 629 aa8.02□□□□□ -1.13
HERPUD1-212ENST00000567944 EIF4G2P78344 907 aaKnown RBP eCLIP8.02□□□□□ -1.13
HERPUD1-212ENST00000567944 HDGFL1Q5TGJ6 251 aa8.02□□□□□ -1.13
HERPUD1-212ENST00000567944 WWC1Q8IX03 1113 aa8.02□□□□□ -1.13
HERPUD1-212ENST00000567944 CEP126Q9P2H0 1117 aa8.02□□□□□ -1.13
HERPUD1-212ENST00000567944 GIGYF1O75420 1035 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-212ENST00000567944 DZIP3Q86Y13 1208 aaKnown RBP8.01□□□□□ -1.13
HERPUD1-212ENST00000567944 PHTF2Q8N3S3 785 aa8.01□□□□□ -1.13
HERPUD1-212ENST00000567944 SLC10A4Q96EP9 437 aa8.01□□□□□ -1.13
HERPUD1-212ENST00000567944 AAASQ9NRG9 546 aa8.01□□□□□ -1.13
HERPUD1-212ENST00000567944 ARID3CA6NKF2 412 aa8□□□□□ -1.13
HERPUD1-212ENST00000567944 ADH1CP00326 375 aa8□□□□□ -1.13
HERPUD1-212ENST00000567944 ALDH1A1P00352 501 aa8□□□□□ -1.13
HERPUD1-212ENST00000567944 NR3C2P08235 984 aa8□□□□□ -1.13
HERPUD1-212ENST00000567944 SOX11P35716 441 aa8□□□□□ -1.13
HERPUD1-212ENST00000567944 ARID5BQ14865 1188 aa8□□□□□ -1.13
HERPUD1-212ENST00000567944 GLMNQ92990 594 aa8□□□□□ -1.13
HERPUD1-212ENST00000567944 UCN2Q96RP3 112 aa8□□□□□ -1.13
HERPUD1-212ENST00000567944 KCTD15Q96SI1 283 aaPredicted RBP8□□□□□ -1.13
HERPUD1-212ENST00000567944 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-212ENST00000567944 VASH1Q7L8A9 365 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-212ENST00000567944 CYP4X1Q8N118 509 aa7.99□□□□□ -1.13
HERPUD1-212ENST00000567944 PIK3CDO00329 1044 aa7.98□□□□□ -1.13
HERPUD1-212ENST00000567944 SEMA3FQ13275 785 aa7.98□□□□□ -1.13
HERPUD1-212ENST00000567944 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
HERPUD1-212ENST00000567944 INTS6LQ5JSJ4 861 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-212ENST00000567944 KLF16Q9BXK1 252 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-212ENST00000567944 DACH1Q9UI36 760 aa7.98□□□□□ -1.13
HERPUD1-212ENST00000567944 CHIC2Q9UKJ5 165 aa7.98□□□□□ -1.13
HERPUD1-212ENST00000567944 CDV3Q9UKY7 258 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-212ENST00000567944 TTC24A2A3L6 582 aaPredicted RBP7.97□□□□□ -1.13
HERPUD1-212ENST00000567944 SUPT5HO00267 1087 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-212ENST00000567944 FSHRP23945 695 aa7.97□□□□□ -1.13
HERPUD1-212ENST00000567944 NR5A1Q13285 461 aa7.96□□□□□ -1.14
HERPUD1-212ENST00000567944 NBPF20Q3BBV1 942 aa7.96□□□□□ -1.14
HERPUD1-212ENST00000567944 HPS1Q92902 700 aa7.96□□□□□ -1.14
HERPUD1-212ENST00000567944 CCDC85AQ96PX6 553 aaPredicted RBP7.96□□□□□ -1.14
HERPUD1-212ENST00000567944 WFS1O76024 890 aa7.95□□□□□ -1.14
HERPUD1-212ENST00000567944 NNTQ13423 1086 aa7.95□□□□□ -1.14
HERPUD1-212ENST00000567944 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
HERPUD1-212ENST00000567944 SEPT12Q8IYM1 358 aa7.94□□□□□ -1.14
HERPUD1-212ENST00000567944 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
HERPUD1-212ENST00000567944 PPP1R26Q5T8A7 1209 aaPredicted RBP7.93□□□□□ -1.14
HERPUD1-212ENST00000567944 TBC1D9Q6ZT07 1266 aa7.93□□□□□ -1.14
HERPUD1-212ENST00000567944 ZNF592Q92610 1267 aa7.93□□□□□ -1.14
HERPUD1-212ENST00000567944 WASF2Q9Y6W5 498 aa7.93□□□□□ -1.14
HERPUD1-212ENST00000567944 AVPP01185 164 aa7.92□□□□□ -1.14
HERPUD1-212ENST00000567944 RAB15P59190 212 aa7.92□□□□□ -1.14
HERPUD1-212ENST00000567944 CCDC116Q8IYX3 515 aa7.92□□□□□ -1.14
HERPUD1-212ENST00000567944 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
HERPUD1-212ENST00000567944 TMPRSS4Q9NRS4 437 aa7.92□□□□□ -1.14
HERPUD1-212ENST00000567944 GMPR2Q9P2T1 348 aaKnown RBP7.92□□□□□ -1.14
HERPUD1-212ENST00000567944 LILRA1O75019 489 aa7.91□□□□□ -1.14
HERPUD1-212ENST00000567944 TIMP2P16035 220 aa7.91□□□□□ -1.14
HERPUD1-212ENST00000567944 SLFNL1Q499Z3 407 aa7.91□□□□□ -1.14
HERPUD1-212ENST00000567944 RNF135Q8IUD6 432 aa7.91□□□□□ -1.14
HERPUD1-212ENST00000567944 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
HERPUD1-212ENST00000567944 STK17AQ9UEE5 414 aa7.91□□□□□ -1.14
HERPUD1-212ENST00000567944 PALM3A6NDB9 673 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 SCTRP47872 440 aa7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 RNF20Q5VTR2 975 aa7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 PLPP7Q8NBV4 271 aa7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 ZNF784Q8NCA9 323 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 ITPKCQ96DU7 683 aa7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 PPP1R12CQ9BZL4 782 aa7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 TFIP11Q9UBB9 837 aaKnown RBP7.9□□□□□ -1.14
HERPUD1-212ENST00000567944 C11orf95C9JLR9 678 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-212ENST00000567944 ADD1P35611 737 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-212ENST00000567944 NFX1Q12986 1120 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-212ENST00000567944 CFAP70Q5T0N1 1121 aa7.89□□□□□ -1.15
HERPUD1-212ENST00000567944 CCDC82Q8N4S0 544 aa7.89□□□□□ -1.15
HERPUD1-212ENST00000567944 PCDHB11Q9Y5F2 797 aa7.89□□□□□ -1.15
HERPUD1-212ENST00000567944 ATP9BO43861 1147 aa7.88□□□□□ -1.15
HERPUD1-212ENST00000567944 SKIP12755 728 aa7.88□□□□□ -1.15
HERPUD1-212ENST00000567944 WDR4P57081 412 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-212ENST00000567944 ERVK-9P63128 1117 aa7.88□□□□□ -1.15
HERPUD1-212ENST00000567944 DHX9Q08211 1270 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-212ENST00000567944 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
HERPUD1-212ENST00000567944 MAFBQ9Y5Q3 323 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-212ENST00000567944 EMILIN1Q9Y6C2 1016 aa7.88□□□□□ -1.15
HERPUD1-212ENST00000567944 ZIC2O95409 532 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-212ENST00000567944 DEPDC4Q8N2C3 294 aa7.87□□□□□ -1.15
HERPUD1-212ENST00000567944 KDF1Q8NAX2 398 aaPredicted RBP7.87□□□□□ -1.15
HERPUD1-212ENST00000567944 USP17L5A8MUK1 530 aa7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 AXIN1O15169 862 aa7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 SMCPP49901 116 aaPredicted RBP7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 SRPK2P78362 688 aaKnown RBP7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 CBLBQ13191 982 aa7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 MAP7D1Q3KQU3 841 aa7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 Q6ZVU0 165 aa7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 CRIPAKQ8N1N5 446 aa7.86□□□□□ -1.15
HERPUD1-212ENST00000567944 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms