RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 NLRP13Q86W25 1043 aa22.99■■□□□ 1.27
CLN6-208ENST00000567060 ABTB2Q8N961 1025 aa22.99■■□□□ 1.27
CLN6-208ENST00000567060 USP31Q70CQ4 1352 aa22.98■■□□□ 1.27
CLN6-208ENST00000567060 USP54Q70EL1 1684 aa22.97■■□□□ 1.27
CLN6-208ENST00000567060 USP35Q9P2H5 1018 aa22.97■■□□□ 1.27
CLN6-208ENST00000567060 BARGINQ6ZT62 677 aa22.96■■□□□ 1.27
CLN6-208ENST00000567060 PANK3Q9H999 370 aa22.96■■□□□ 1.27
CLN6-208ENST00000567060 PIK3C2AO00443 1686 aa22.94■■□□□ 1.26
CLN6-208ENST00000567060 NSD3Q9BZ95 1437 aa22.94■■□□□ 1.26
CLN6-208ENST00000567060 PARD3Q8TEW0 1356 aa22.94■■□□□ 1.26
CLN6-208ENST00000567060 USP19O94966 1318 aa22.94■■□□□ 1.26
CLN6-208ENST00000567060 CGNL1Q0VF96 1302 aa22.94■■□□□ 1.26
CLN6-208ENST00000567060 EVA1CP58658 441 aa22.94■■□□□ 1.26
CLN6-208ENST00000567060 LARP1Q6PKG0 1096 aaKnown RBP22.94■■□□□ 1.26
CLN6-208ENST00000567060 PHRF1Q9P1Y6 1649 aaKnown RBP22.93■■□□□ 1.26
CLN6-208ENST00000567060 PDE3BQ13370 1112 aa22.93■■□□□ 1.26
CLN6-208ENST00000567060 CARD14Q9BXL6 1004 aa22.93■■□□□ 1.26
CLN6-208ENST00000567060 NSD2O96028 1365 aa22.92■■□□□ 1.26
CLN6-208ENST00000567060 ZNF316A6NFI3 1004 aaPredicted RBP22.92■■□□□ 1.26
CLN6-208ENST00000567060 NLRP6P59044 892 aa22.92■■□□□ 1.26
CLN6-208ENST00000567060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.92■■□□□ 1.26
CLN6-208ENST00000567060 CAMTA1Q9Y6Y1 1673 aa22.92■■□□□ 1.26
CLN6-208ENST00000567060 KNSTRNQ9Y448 316 aa22.91■■□□□ 1.26
CLN6-208ENST00000567060 KCNH5Q8NCM2 988 aa22.9■■□□□ 1.26
CLN6-208ENST00000567060 SLIT3O75094 1523 aa22.9■■□□□ 1.26
CLN6-208ENST00000567060 KIF20BQ96Q89 1820 aa22.89■■□□□ 1.26
CLN6-208ENST00000567060 TCP11L2Q8N4U5 519 aa22.89■■□□□ 1.25
CLN6-208ENST00000567060 OVOS2A0A0J9YW53 1432 aa22.89■■□□□ 1.25
CLN6-208ENST00000567060 OVOS2Q6IE36 1432 aa22.89■■□□□ 1.25
CLN6-208ENST00000567060 RREB1Q92766 1687 aa22.88■■□□□ 1.25
CLN6-208ENST00000567060 FYB1O15117 783 aa22.88■■□□□ 1.25
CLN6-208ENST00000567060 NPC1L1Q9UHC9 1359 aa22.88■■□□□ 1.25
CLN6-208ENST00000567060 NBPF14Q5TI25 921 aa22.87■■□□□ 1.25
CLN6-208ENST00000567060 NME9Q86XW9 330 aa22.87■■□□□ 1.25
CLN6-208ENST00000567060 COG3Q96JB2 828 aa22.87■■□□□ 1.25
CLN6-208ENST00000567060 CPDO75976 1380 aa22.87■■□□□ 1.25
CLN6-208ENST00000567060 PER1O15534 1290 aaPredicted RBP22.86■■□□□ 1.25
CLN6-208ENST00000567060 NUP188Q5SRE5 1749 aa22.85■■□□□ 1.25
CLN6-208ENST00000567060 LMO7Q8WWI1 1683 aa22.84■■□□□ 1.25
CLN6-208ENST00000567060 GCP02774 474 aa22.84■■□□□ 1.25
CLN6-208ENST00000567060 YY1P25490 414 aa22.84■■□□□ 1.25
CLN6-208ENST00000567060 THRAP3Q9Y2W1 955 aaKnown RBP22.84■■□□□ 1.25
CLN6-208ENST00000567060 ANKRD26Q9UPS8 1709 aa22.84■■□□□ 1.25
CLN6-208ENST00000567060 KCNQ2O43526 872 aa22.81■■□□□ 1.24
CLN6-208ENST00000567060 AMER1Q5JTC6 1135 aaPredicted RBP22.81■■□□□ 1.24
CLN6-208ENST00000567060 SPON1Q9HCB6 807 aa22.81■■□□□ 1.24
CLN6-208ENST00000567060 UTRNP46939 3433 aa22.8■■□□□ 1.24
CLN6-208ENST00000567060 GGNBP2Q9H3C7 697 aa22.8■■□□□ 1.24
CLN6-208ENST00000567060 ABCC6O95255 1503 aa22.8■■□□□ 1.24
CLN6-208ENST00000567060 NFAT5O94916 1531 aa22.79■■□□□ 1.24
CLN6-208ENST00000567060 COL5A2P05997 1499 aaPredicted RBP22.79■■□□□ 1.24
CLN6-208ENST00000567060 PTF1AQ7RTS3 328 aa22.77■■□□□ 1.24
CLN6-208ENST00000567060 AATKQ6ZMQ8 1374 aa22.76■■□□□ 1.23
CLN6-208ENST00000567060 PLSCR1O15162 318 aa22.76■■□□□ 1.23
CLN6-208ENST00000567060 PARP4Q9UKK3 1724 aaKnown RBP22.76■■□□□ 1.23
CLN6-208ENST00000567060 KIF24Q5T7B8 1368 aa22.76■■□□□ 1.23
CLN6-208ENST00000567060 DDX10Q13206 875 aaKnown RBP22.75■■□□□ 1.23
CLN6-208ENST00000567060 ARHGEF25Q86VW2 580 aa22.75■■□□□ 1.23
CLN6-208ENST00000567060 PPP1R1BQ9UD71 204 aaPredicted RBP22.75■■□□□ 1.23
CLN6-208ENST00000567060 CRB1P82279 1406 aa22.74■■□□□ 1.23
CLN6-208ENST00000567060 PEAK1Q9H792 1746 aa22.74■■□□□ 1.23
CLN6-208ENST00000567060 ANO8Q9HCE9 1232 aaPredicted RBP22.74■■□□□ 1.23
CLN6-208ENST00000567060 PROM2Q8N271 834 aa22.73■■□□□ 1.23
CLN6-208ENST00000567060 PDGFDQ9GZP0 370 aaPredicted RBP22.73■■□□□ 1.23
CLN6-208ENST00000567060 MORC1Q86VD1 984 aa22.72■■□□□ 1.23
CLN6-208ENST00000567060 OVOS2A0A0G2JMS6 1433 aa22.72■■□□□ 1.23
CLN6-208ENST00000567060 AXIN2Q9Y2T1 843 aa22.71■■□□□ 1.23
CLN6-208ENST00000567060 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
CLN6-208ENST00000567060 ZBTB7CA1YPR0 619 aa22.7■■□□□ 1.22
CLN6-208ENST00000567060 DDB1Q16531 1140 aa22.7■■□□□ 1.22
CLN6-208ENST00000567060 BCL11BQ9C0K0 894 aaPredicted RBP22.7■■□□□ 1.22
CLN6-208ENST00000567060 LTN1O94822 1766 aa22.69■■□□□ 1.22
CLN6-208ENST00000567060 MARCH10Q8NA82 808 aaPredicted RBP22.69■■□□□ 1.22
CLN6-208ENST00000567060 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
CLN6-208ENST00000567060 TOM1L2Q6ZVM7 507 aa22.67■■□□□ 1.22
CLN6-208ENST00000567060 COL18A1P39060 1754 aa22.67■■□□□ 1.22
CLN6-208ENST00000567060 MAP3K19Q56UN5 1328 aa22.66■■□□□ 1.22
CLN6-208ENST00000567060 SOX12O15370 315 aa22.66■■□□□ 1.22
CLN6-208ENST00000567060 CC2D1BQ5T0F9 858 aaKnown RBP22.66■■□□□ 1.22
CLN6-208ENST00000567060 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
CLN6-208ENST00000567060 LRRC37A3O60309 1634 aa22.65■■□□□ 1.22
CLN6-208ENST00000567060 DCAF8L1A6NGE4 600 aa22.65■■□□□ 1.22
CLN6-208ENST00000567060 IP6K1Q92551 441 aa22.65■■□□□ 1.22
CLN6-208ENST00000567060 MAP2P11137 1827 aaKnown RBP22.65■■□□□ 1.22
CLN6-208ENST00000567060 RGPD3A6NKT7 1758 aaPredicted RBP22.65■■□□□ 1.22
CLN6-208ENST00000567060 RGPD4Q7Z3J3 1758 aa22.65■■□□□ 1.22
CLN6-208ENST00000567060 FLT4P35916 1363 aa22.64■■□□□ 1.22
CLN6-208ENST00000567060 CASZ1Q86V15 1759 aa22.64■■□□□ 1.22
CLN6-208ENST00000567060 PTGER2P43116 358 aa22.64■■□□□ 1.21
CLN6-208ENST00000567060 AMPHP49418 695 aa22.64■■□□□ 1.21
CLN6-208ENST00000567060 WDR17Q8IZU2 1322 aa22.63■■□□□ 1.21
CLN6-208ENST00000567060 ZBTB7AO95365 584 aa22.63■■□□□ 1.21
CLN6-208ENST00000567060 RALBP1Q15311 655 aa22.63■■□□□ 1.21
CLN6-208ENST00000567060 BCL9O00512 1426 aa22.63■■□□□ 1.21
CLN6-208ENST00000567060 POLKQ9UBT6 870 aa22.61■■□□□ 1.21
CLN6-208ENST00000567060 HOXC9P31274 260 aa22.6■■□□□ 1.21
CLN6-208ENST00000567060 RRS1Q15050 365 aaKnown RBP22.6■■□□□ 1.21
CLN6-208ENST00000567060 ATF5Q9Y2D1 282 aaPredicted RBP22.6■■□□□ 1.21
CLN6-208ENST00000567060 INSRP06213 1382 aa22.6■■□□□ 1.21
CLN6-208ENST00000567060 TXNRD1Q16881 649 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms