RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 SOS2Q07890 1332 aaPredicted RBP20.88■□□□□ 0.93
VAC14-208ENST00000566655 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
VAC14-208ENST00000566655 AMPHP49418 695 aa20.87■□□□□ 0.93
VAC14-208ENST00000566655 WWC1Q8IX03 1113 aa20.87■□□□□ 0.93
VAC14-208ENST00000566655 PNNQ9H307 717 aaKnown RBP20.87■□□□□ 0.93
VAC14-208ENST00000566655 MED1Q15648 1581 aaPredicted RBP20.87■□□□□ 0.93
VAC14-208ENST00000566655 PRKAR2BP31323 418 aa20.86■□□□□ 0.93
VAC14-208ENST00000566655 ARHGEF25Q86VW2 580 aa20.86■□□□□ 0.93
VAC14-208ENST00000566655 SPINK5Q9NQ38 1064 aaPredicted RBP20.86■□□□□ 0.93
VAC14-208ENST00000566655 RRP7AQ9Y3A4 280 aaKnown RBP20.86■□□□□ 0.93
VAC14-208ENST00000566655 RGPD1P0DJD0 1748 aa20.86■□□□□ 0.93
VAC14-208ENST00000566655 HMOX1P09601 288 aa20.85■□□□□ 0.93
VAC14-208ENST00000566655 TMPOP42166 694 aaKnown RBP20.85■□□□□ 0.93
VAC14-208ENST00000566655 GOLGA2Q08379 1002 aa20.85■□□□□ 0.93
VAC14-208ENST00000566655 SLFN5Q08AF3 891 aa20.85■□□□□ 0.93
VAC14-208ENST00000566655 IP6K1Q92551 441 aa20.85■□□□□ 0.93
VAC14-208ENST00000566655 ARHGEF10O15013 1369 aa20.84■□□□□ 0.93
VAC14-208ENST00000566655 PHRF1Q9P1Y6 1649 aaKnown RBP20.84■□□□□ 0.93
VAC14-208ENST00000566655 DUSP27Q5VZP5 1158 aa20.84■□□□□ 0.93
VAC14-208ENST00000566655 PHACTR3Q96KR7 559 aa20.84■□□□□ 0.93
VAC14-208ENST00000566655 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
VAC14-208ENST00000566655 LMOD2Q6P5Q4 547 aa20.83■□□□□ 0.92
VAC14-208ENST00000566655 AEBP1Q8IUX7 1158 aa20.83■□□□□ 0.92
VAC14-208ENST00000566655 TRIM35Q9UPQ4 493 aa20.83■□□□□ 0.92
VAC14-208ENST00000566655 IGSF1Q8N6C5 1336 aa20.83■□□□□ 0.92
VAC14-208ENST00000566655 EYA1Q99502 592 aa20.82■□□□□ 0.92
VAC14-208ENST00000566655 MAPK8IP3Q9UPT6 1336 aa20.82■□□□□ 0.92
VAC14-208ENST00000566655 KDRP35968 1356 aa20.81■□□□□ 0.92
VAC14-208ENST00000566655 NEUROD2Q15784 382 aa20.81■□□□□ 0.92
VAC14-208ENST00000566655 RNF123Q5XPI4 1314 aa20.81■□□□□ 0.92
VAC14-208ENST00000566655 SULT6B1Q6IMI4 303 aa20.81■□□□□ 0.92
VAC14-208ENST00000566655 WDR63Q8IWG1 891 aa20.81■□□□□ 0.92
VAC14-208ENST00000566655 NFE2L2Q16236 605 aa20.79■□□□□ 0.92
VAC14-208ENST00000566655 E9PSI1 815 aa20.78■□□□□ 0.92
VAC14-208ENST00000566655 NHSL1Q5SYE7 1610 aa20.77■□□□□ 0.92
VAC14-208ENST00000566655 RIPK4P57078 832 aa20.76■□□□□ 0.91
VAC14-208ENST00000566655 CRYBG1Q9Y4K1 1723 aa20.76■□□□□ 0.91
VAC14-208ENST00000566655 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
VAC14-208ENST00000566655 AXIN2Q9Y2T1 843 aa20.75■□□□□ 0.91
VAC14-208ENST00000566655 LTN1O94822 1766 aa20.75■□□□□ 0.91
VAC14-208ENST00000566655 PLEKHG5O94827 1062 aa20.73■□□□□ 0.91
VAC14-208ENST00000566655 ZC3H6P61129 1189 aaKnown RBP20.73■□□□□ 0.91
VAC14-208ENST00000566655 ILDR1Q86SU0 546 aaPredicted RBP20.73■□□□□ 0.91
VAC14-208ENST00000566655 NCAPD2Q15021 1401 aa20.73■□□□□ 0.91
VAC14-208ENST00000566655 CPDO75976 1380 aa20.73■□□□□ 0.91
VAC14-208ENST00000566655 LTV1Q96GA3 475 aaPredicted RBP20.72■□□□□ 0.91
VAC14-208ENST00000566655 IL16Q14005 1332 aa20.72■□□□□ 0.91
VAC14-208ENST00000566655 NBPF6Q5VWK0 638 aa20.72■□□□□ 0.91
VAC14-208ENST00000566655 NBPF4Q96M43 638 aa20.72■□□□□ 0.91
VAC14-208ENST00000566655 RCAN3Q9UKA8 241 aa20.72■□□□□ 0.91
VAC14-208ENST00000566655 AHDC1Q5TGY3 1603 aaPredicted RBP20.71■□□□□ 0.91
VAC14-208ENST00000566655 NEFMP07197 916 aa20.71■□□□□ 0.91
VAC14-208ENST00000566655 ABCC6O95255 1503 aa20.7■□□□□ 0.9
VAC14-208ENST00000566655 ZBTB7CA1YPR0 619 aa20.7■□□□□ 0.9
VAC14-208ENST00000566655 COL18A1P39060 1754 aa20.69■□□□□ 0.9
VAC14-208ENST00000566655 ROBO1Q9Y6N7 1651 aa20.69■□□□□ 0.9
VAC14-208ENST00000566655 FKBP8Q14318 412 aa20.69■□□□□ 0.9
VAC14-208ENST00000566655 ANKRD24Q8TF21 1146 aa20.69■□□□□ 0.9
VAC14-208ENST00000566655 KIAA0232Q92628 1395 aa20.68■□□□□ 0.9
VAC14-208ENST00000566655 MTHFSDQ2M296 383 aaKnown RBP20.67■□□□□ 0.9
VAC14-208ENST00000566655 USHBP1Q8N6Y0 703 aa20.67■□□□□ 0.9
VAC14-208ENST00000566655 LRRC59Q96AG4 307 aaKnown RBP20.67■□□□□ 0.9
VAC14-208ENST00000566655 ERBB3P21860 1342 aa20.67■□□□□ 0.9
VAC14-208ENST00000566655 LMO7Q8WWI1 1683 aa20.65■□□□□ 0.9
VAC14-208ENST00000566655 CAMTA1Q9Y6Y1 1673 aa20.65■□□□□ 0.9
VAC14-208ENST00000566655 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
VAC14-208ENST00000566655 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
VAC14-208ENST00000566655 NEFLP07196 543 aa20.63■□□□□ 0.89
VAC14-208ENST00000566655 RRP1P56182 461 aaKnown RBP20.63■□□□□ 0.89
VAC14-208ENST00000566655 LMOD3Q0VAK6 560 aa20.63■□□□□ 0.89
VAC14-208ENST00000566655 CHRNA2Q15822 529 aa20.63■□□□□ 0.89
VAC14-208ENST00000566655 MYH16Q9H6N6 1097 aa20.63■□□□□ 0.89
VAC14-208ENST00000566655 FANCIQ9NVI1 1328 aa20.63■□□□□ 0.89
VAC14-208ENST00000566655 FAM83GA6ND36 823 aa20.62■□□□□ 0.89
VAC14-208ENST00000566655 TOM1O60784 492 aa20.61■□□□□ 0.89
VAC14-208ENST00000566655 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
VAC14-208ENST00000566655 DCTN1Q14203 1278 aa20.6■□□□□ 0.89
VAC14-208ENST00000566655 GAS2L2Q8NHY3 880 aa20.6■□□□□ 0.89
VAC14-208ENST00000566655 TSR2Q969E8 191 aaKnown RBP20.6■□□□□ 0.89
VAC14-208ENST00000566655 ABCA3Q99758 1704 aa20.6■□□□□ 0.89
VAC14-208ENST00000566655 IFT57Q9NWB7 429 aa20.59■□□□□ 0.89
VAC14-208ENST00000566655 CALD1Q05682 793 aaKnown RBP20.59■□□□□ 0.89
VAC14-208ENST00000566655 CRB1P82279 1406 aa20.58■□□□□ 0.89
VAC14-208ENST00000566655 HTATSF1O43719 755 aaKnown RBP20.58■□□□□ 0.88
VAC14-208ENST00000566655 ERICH6BQ5W0A0 696 aa20.58■□□□□ 0.88
VAC14-208ENST00000566655 COL16A1Q07092 1604 aaPredicted RBP20.57■□□□□ 0.88
VAC14-208ENST00000566655 COL22A1Q8NFW1 1626 aaPredicted RBP20.57■□□□□ 0.88
VAC14-208ENST00000566655 PRDM11Q9NQV5 511 aa20.57■□□□□ 0.88
VAC14-208ENST00000566655 EXOSC9Q06265 439 aaKnown RBP20.56■□□□□ 0.88
VAC14-208ENST00000566655 MCM10Q7L590 875 aa20.56■□□□□ 0.88
VAC14-208ENST00000566655 CFAP44Q96MT7 982 aa20.56■□□□□ 0.88
VAC14-208ENST00000566655 CT47B1P0C2W7 299 aaPredicted RBP20.55■□□□□ 0.88
VAC14-208ENST00000566655 RARSP54136 660 aaKnown RBP20.55■□□□□ 0.88
VAC14-208ENST00000566655 GNAI1P63096 354 aa20.55■□□□□ 0.88
VAC14-208ENST00000566655 RGPD2P0DJD1 1756 aa20.55■□□□□ 0.88
VAC14-208ENST00000566655 FAM208AQ9UK61 1670 aaKnown RBP20.55■□□□□ 0.88
VAC14-208ENST00000566655 RGPD5Q99666 1765 aa20.54■□□□□ 0.88
VAC14-208ENST00000566655 MBIPQ9NS73 344 aa20.54■□□□□ 0.88
VAC14-208ENST00000566655 DLG5Q8TDM6 1919 aa20.54■□□□□ 0.88
VAC14-208ENST00000566655 COL5A2P05997 1499 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms