RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
KARS-207ENST00000566560 NUTM2BA6NNL0 878 aaPredicted RBP15.67■□□□□ 0.1
KARS-207ENST00000566560 NUTM2EB1AL46 878 aaPredicted RBP15.67■□□□□ 0.1
KARS-207ENST00000566560 NUTM2AQ8IVF1 878 aaPredicted RBP15.67■□□□□ 0.1
KARS-207ENST00000566560 REM2Q8IYK8 340 aaPredicted RBP15.67■□□□□ 0.1
KARS-207ENST00000566560 SOX12O15370 315 aa15.66■□□□□ 0.1
KARS-207ENST00000566560 COL14A1Q05707 1796 aaKnown RBP15.65■□□□□ 0.1
KARS-207ENST00000566560 CC2D1BQ5T0F9 858 aaKnown RBP15.65■□□□□ 0.1
KARS-207ENST00000566560 KCNH5Q8NCM2 988 aa15.65■□□□□ 0.1
KARS-207ENST00000566560 GCP02774 474 aa15.64■□□□□ 0.09
KARS-207ENST00000566560 ABCC6O95255 1503 aa15.63■□□□□ 0.09
KARS-207ENST00000566560 CPDO75976 1380 aa15.63■□□□□ 0.09
KARS-207ENST00000566560 KIAA0232Q92628 1395 aa15.63■□□□□ 0.09
KARS-207ENST00000566560 ADAMTS2O95450 1211 aa15.63■□□□□ 0.09
KARS-207ENST00000566560 CNGB1Q14028 1251 aaPredicted RBP15.63■□□□□ 0.09
KARS-207ENST00000566560 MEX3CQ5U5Q3 659 aaKnown RBP15.63■□□□□ 0.09
KARS-207ENST00000566560 MORC1Q86VD1 984 aa15.63■□□□□ 0.09
KARS-207ENST00000566560 SPDYE1Q8NFV5 336 aaPredicted RBP15.63■□□□□ 0.09
KARS-207ENST00000566560 LMO7Q8WWI1 1683 aa15.63■□□□□ 0.09
KARS-207ENST00000566560 MAP2P11137 1827 aaKnown RBP15.62■□□□□ 0.09
KARS-207ENST00000566560 VASPP50552 380 aaPredicted RBP15.62■□□□□ 0.09
KARS-207ENST00000566560 NWD2Q9ULI1 1742 aa15.62■□□□□ 0.09
KARS-207ENST00000566560 NRAPQ86VF7 1730 aa15.61■□□□□ 0.09
KARS-207ENST00000566560 PEAK1Q9H792 1746 aa15.61■□□□□ 0.09
KARS-207ENST00000566560 ZC3H6P61129 1189 aaKnown RBP15.61■□□□□ 0.09
KARS-207ENST00000566560 PRDM11Q9NQV5 511 aa15.61■□□□□ 0.09
KARS-207ENST00000566560 COL18A1P39060 1754 aa15.61■□□□□ 0.09
KARS-207ENST00000566560 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
KARS-207ENST00000566560 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
KARS-207ENST00000566560 AATKQ6ZMQ8 1374 aa15.6■□□□□ 0.09
KARS-207ENST00000566560 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.6■□□□□ 0.09
KARS-207ENST00000566560 RGPD5Q99666 1765 aa15.59■□□□□ 0.09
KARS-207ENST00000566560 RTL1A6NKG5 1358 aa15.59■□□□□ 0.09
KARS-207ENST00000566560 PARD3Q8TEW0 1356 aa15.59■□□□□ 0.09
KARS-207ENST00000566560 SMG6Q86US8 1419 aaKnown RBP15.59■□□□□ 0.09
KARS-207ENST00000566560 C8orf37Q96NL8 207 aa15.58■□□□□ 0.08
KARS-207ENST00000566560 MAP3K19Q56UN5 1328 aa15.58■□□□□ 0.08
KARS-207ENST00000566560 FBLN1P23142 703 aa15.57■□□□□ 0.08
KARS-207ENST00000566560 RRS1Q15050 365 aaKnown RBP15.57■□□□□ 0.08
KARS-207ENST00000566560 CHRNA2Q15822 529 aa15.57■□□□□ 0.08
KARS-207ENST00000566560 ARHGEF25Q86VW2 580 aa15.57■□□□□ 0.08
KARS-207ENST00000566560 CDK12Q9NYV4 1490 aaPredicted RBP15.57■□□□□ 0.08
KARS-207ENST00000566560 SLIT2O94813 1529 aa15.57■□□□□ 0.08
KARS-207ENST00000566560 FAM208AQ9UK61 1670 aaKnown RBP15.56■□□□□ 0.08
KARS-207ENST00000566560 CAMTA1Q9Y6Y1 1673 aa15.55■□□□□ 0.08
KARS-207ENST00000566560 BLMP54132 1417 aaPredicted RBP15.55■□□□□ 0.08
KARS-207ENST00000566560 FLT4P35916 1363 aa15.55■□□□□ 0.08
KARS-207ENST00000566560 KIF24Q5T7B8 1368 aa15.55■□□□□ 0.08
KARS-207ENST00000566560 EMILIN1Q9Y6C2 1016 aa15.55■□□□□ 0.08
KARS-207ENST00000566560 COL5A2P05997 1499 aaPredicted RBP15.54■□□□□ 0.08
KARS-207ENST00000566560 FAM83GA6ND36 823 aa15.54■□□□□ 0.08
KARS-207ENST00000566560 AMPHP49418 695 aa15.54■□□□□ 0.08
KARS-207ENST00000566560 NGLY1Q96IV0 654 aa15.54■□□□□ 0.08
KARS-207ENST00000566560 AFF2P51816 1311 aa15.53■□□□□ 0.08
KARS-207ENST00000566560 RALBP1Q15311 655 aa15.53■□□□□ 0.08
KARS-207ENST00000566560 PPM1GO15355 546 aaPredicted RBP15.52■□□□□ 0.08
KARS-207ENST00000566560 HOXC9P31274 260 aa15.52■□□□□ 0.08
KARS-207ENST00000566560 BTG4Q9NY30 223 aa15.52■□□□□ 0.08
KARS-207ENST00000566560 POLKQ9UBT6 870 aa15.52■□□□□ 0.08
KARS-207ENST00000566560 CLEC11AQ9Y240 323 aa15.52■□□□□ 0.08
KARS-207ENST00000566560 PRKRIP1Q9H875 184 aaPredicted RBP15.51■□□□□ 0.07
KARS-207ENST00000566560 BCL9LQ86UU0 1499 aa15.51■□□□□ 0.07
KARS-207ENST00000566560 ANP32CO43423 234 aa15.5■□□□□ 0.07
KARS-207ENST00000566560 PPP2R1AP30153 589 aa15.5■□□□□ 0.07
KARS-207ENST00000566560 FNBP4Q8N3X1 1017 aaPredicted RBP15.5■□□□□ 0.07
KARS-207ENST00000566560 IP6K1Q92551 441 aa15.5■□□□□ 0.07
KARS-207ENST00000566560 INSRP06213 1382 aa15.49■□□□□ 0.07
KARS-207ENST00000566560 RGPD2P0DJD1 1756 aa15.49■□□□□ 0.07
KARS-207ENST00000566560 ERBB3P21860 1342 aa15.49■□□□□ 0.07
KARS-207ENST00000566560 MYBBP1AQ9BQG0 1328 aaKnown RBP15.49■□□□□ 0.07
KARS-207ENST00000566560 COL3A1P02461 1466 aaPredicted RBP15.49■□□□□ 0.07
KARS-207ENST00000566560 STRN4Q9NRL3 753 aa15.49■□□□□ 0.07
KARS-207ENST00000566560 USP21Q9UK80 565 aa15.49■□□□□ 0.07
KARS-207ENST00000566560 AXIN2Q9Y2T1 843 aa15.49■□□□□ 0.07
KARS-207ENST00000566560 WNK3Q9BYP7 1800 aa15.49■□□□□ 0.07
KARS-207ENST00000566560 MTHFSP49914 203 aa15.48■□□□□ 0.07
KARS-207ENST00000566560 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
KARS-207ENST00000566560 ATRNO75882 1429 aa15.47■□□□□ 0.07
KARS-207ENST00000566560 CSB-PGBD3P0DP91 1061 aa15.47■□□□□ 0.07
KARS-207ENST00000566560 HSP90AB2PQ58FF8 381 aa15.47■□□□□ 0.07
KARS-207ENST00000566560 DIEXFQ68CQ4 756 aaKnown RBP15.47■□□□□ 0.07
KARS-207ENST00000566560 UNC5CLQ8IV45 518 aa15.47■□□□□ 0.07
KARS-207ENST00000566560 WDR17Q8IZU2 1322 aa15.46■□□□□ 0.07
KARS-207ENST00000566560 CRB1P82279 1406 aa15.46■□□□□ 0.07
KARS-207ENST00000566560 EVA1CP58658 441 aa15.46■□□□□ 0.07
KARS-207ENST00000566560 ZNF772Q68DY9 489 aaPredicted RBP15.46■□□□□ 0.07
KARS-207ENST00000566560 ANKRD24Q8TF21 1146 aa15.46■□□□□ 0.07
KARS-207ENST00000566560 LTV1Q96GA3 475 aaPredicted RBP15.46■□□□□ 0.07
KARS-207ENST00000566560 RTN4Q9NQC3 1192 aaKnown RBP15.46■□□□□ 0.07
KARS-207ENST00000566560 RGPD1P0DJD0 1748 aa15.46■□□□□ 0.06
KARS-207ENST00000566560 GLI3P10071 1580 aa15.45■□□□□ 0.06
KARS-207ENST00000566560 LARP1Q6PKG0 1096 aaKnown RBP15.44■□□□□ 0.06
KARS-207ENST00000566560 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
KARS-207ENST00000566560 PRR29P0C7W0 189 aa15.43■□□□□ 0.06
KARS-207ENST00000566560 EIF4A2Q14240 407 aaKnown RBP15.43■□□□□ 0.06
KARS-207ENST00000566560 VPS72Q15906 364 aa15.43■□□□□ 0.06
KARS-207ENST00000566560 TOM1L2Q6ZVM7 507 aa15.43■□□□□ 0.06
KARS-207ENST00000566560 MIER1Q8N108 512 aa15.43■□□□□ 0.06
KARS-207ENST00000566560 TRPC5Q9UL62 973 aaPredicted RBP15.43■□□□□ 0.06
KARS-207ENST00000566560 CCDC9Q9Y3X0 531 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms