RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 AMPHP49418 695 aa12.37□□□□□ -0.43
CNEP1R1-206ENST00000565556 DDX17Q92841 729 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-206ENST00000565556 RUNDC1Q96C34 613 aa12.37□□□□□ -0.43
CNEP1R1-206ENST00000565556 NFAT5O94916 1531 aa12.37□□□□□ -0.43
CNEP1R1-206ENST00000565556 RTL1A6NKG5 1358 aa12.36□□□□□ -0.43
CNEP1R1-206ENST00000565556 PEAK1Q9H792 1746 aa12.36□□□□□ -0.43
CNEP1R1-206ENST00000565556 LTN1O94822 1766 aa12.36□□□□□ -0.43
CNEP1R1-206ENST00000565556 GCP02774 474 aa12.36□□□□□ -0.43
CNEP1R1-206ENST00000565556 IL13P35225 146 aa12.36□□□□□ -0.43
CNEP1R1-206ENST00000565556 PHRF1Q9P1Y6 1649 aaKnown RBP12.35□□□□□ -0.43
CNEP1R1-206ENST00000565556 FCHSD2O94868 740 aa12.35□□□□□ -0.43
CNEP1R1-206ENST00000565556 IQSEC2Q5JU85 1478 aa12.35□□□□□ -0.43
CNEP1R1-206ENST00000565556 ROBO1Q9Y6N7 1651 aa12.34□□□□□ -0.43
CNEP1R1-206ENST00000565556 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
CNEP1R1-206ENST00000565556 TOM1O60784 492 aa12.34□□□□□ -0.43
CNEP1R1-206ENST00000565556 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
CNEP1R1-206ENST00000565556 CCDC146Q8IYE0 955 aa12.34□□□□□ -0.43
CNEP1R1-206ENST00000565556 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
CNEP1R1-206ENST00000565556 HSP90AB2PQ58FF8 381 aa12.34□□□□□ -0.43
CNEP1R1-206ENST00000565556 NEFMP07197 916 aa12.33□□□□□ -0.44
CNEP1R1-206ENST00000565556 HOXC9P31274 260 aa12.33□□□□□ -0.44
CNEP1R1-206ENST00000565556 PDE3BQ13370 1112 aa12.33□□□□□ -0.44
CNEP1R1-206ENST00000565556 EIF4A2Q14240 407 aaKnown RBP12.33□□□□□ -0.44
CNEP1R1-206ENST00000565556 IP6K1Q92551 441 aa12.33□□□□□ -0.44
CNEP1R1-206ENST00000565556 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
CNEP1R1-206ENST00000565556 APAF1O14727 1248 aa12.32□□□□□ -0.44
CNEP1R1-206ENST00000565556 ARHGEF25Q86VW2 580 aa12.32□□□□□ -0.44
CNEP1R1-206ENST00000565556 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
CNEP1R1-206ENST00000565556 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
CNEP1R1-206ENST00000565556 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
CNEP1R1-206ENST00000565556 RGPD1P0DJD0 1748 aa12.31□□□□□ -0.44
CNEP1R1-206ENST00000565556 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
CNEP1R1-206ENST00000565556 TCP11L2Q8N4U5 519 aa12.3□□□□□ -0.44
CNEP1R1-206ENST00000565556 LRRC59Q96AG4 307 aaKnown RBP12.3□□□□□ -0.44
CNEP1R1-206ENST00000565556 RSPH6AQ9H0K4 717 aa12.3□□□□□ -0.44
CNEP1R1-206ENST00000565556 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
CNEP1R1-206ENST00000565556 ABCC6O95255 1503 aa12.29□□□□□ -0.44
CNEP1R1-206ENST00000565556 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 HMOX1P09601 288 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 NOP58Q9Y2X3 529 aaKnown RBP12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 CPDO75976 1380 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 SENP3-EIF4A1A0A087X0R7 540 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 IGSF1Q8N6C5 1336 aa12.28□□□□□ -0.44
CNEP1R1-206ENST00000565556 PHLPP1O60346 1717 aa12.27□□□□□ -0.45
CNEP1R1-206ENST00000565556 UBAP1LF5GYI3 381 aa12.27□□□□□ -0.45
CNEP1R1-206ENST00000565556 ZC3H6P61129 1189 aaKnown RBP12.27□□□□□ -0.45
CNEP1R1-206ENST00000565556 SULT6B1Q6IMI4 303 aa12.27□□□□□ -0.45
CNEP1R1-206ENST00000565556 CERKQ8TCT0 537 aa12.27□□□□□ -0.45
CNEP1R1-206ENST00000565556 CABLES1Q8TDN4 633 aa12.27□□□□□ -0.45
CNEP1R1-206ENST00000565556 ZNF521Q96K83 1311 aa12.27□□□□□ -0.45
CNEP1R1-206ENST00000565556 TMPOP42166 694 aaKnown RBP12.26□□□□□ -0.45
CNEP1R1-206ENST00000565556 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
CNEP1R1-206ENST00000565556 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
CNEP1R1-206ENST00000565556 EYA1Q99502 592 aa12.26□□□□□ -0.45
CNEP1R1-206ENST00000565556 ABCA3Q99758 1704 aa12.26□□□□□ -0.45
CNEP1R1-206ENST00000565556 KDRP35968 1356 aa12.25□□□□□ -0.45
CNEP1R1-206ENST00000565556 COL18A1P39060 1754 aa12.25□□□□□ -0.45
CNEP1R1-206ENST00000565556 COL22A1Q8NFW1 1626 aaPredicted RBP12.25□□□□□ -0.45
CNEP1R1-206ENST00000565556 PIP4K2BP78356 416 aa12.25□□□□□ -0.45
CNEP1R1-206ENST00000565556 NEUROD2Q15784 382 aa12.25□□□□□ -0.45
CNEP1R1-206ENST00000565556 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
CNEP1R1-206ENST00000565556 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
CNEP1R1-206ENST00000565556 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
CNEP1R1-206ENST00000565556 RGPD5Q99666 1765 aa12.24□□□□□ -0.45
CNEP1R1-206ENST00000565556 KIAA0232Q92628 1395 aa12.24□□□□□ -0.45
CNEP1R1-206ENST00000565556 NFE2L2Q16236 605 aa12.24□□□□□ -0.45
CNEP1R1-206ENST00000565556 WDR63Q8IWG1 891 aa12.24□□□□□ -0.45
CNEP1R1-206ENST00000565556 ANKRD24Q8TF21 1146 aa12.24□□□□□ -0.45
CNEP1R1-206ENST00000565556 RRP7AQ9Y3A4 280 aaKnown RBP12.24□□□□□ -0.45
CNEP1R1-206ENST00000565556 COL16A1Q07092 1604 aaPredicted RBP12.24□□□□□ -0.45
CNEP1R1-206ENST00000565556 ANP32AP39687 249 aaKnown RBP12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 RIPK4P57078 832 aa12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 PHACTR3Q96KR7 559 aa12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 FAM208AQ9UK61 1670 aaKnown RBP12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 E9PSI1 815 aa12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 LMOD3Q0VAK6 560 aa12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 AXIN2Q9Y2T1 843 aa12.23□□□□□ -0.45
CNEP1R1-206ENST00000565556 ERBB3P21860 1342 aa12.22□□□□□ -0.45
CNEP1R1-206ENST00000565556 RGPD2P0DJD1 1756 aa12.21□□□□□ -0.45
CNEP1R1-206ENST00000565556 SLFN5Q08AF3 891 aa12.21□□□□□ -0.45
CNEP1R1-206ENST00000565556 NBPF6Q5VWK0 638 aa12.21□□□□□ -0.45
CNEP1R1-206ENST00000565556 CDCA7LQ96GN5 454 aa12.21□□□□□ -0.45
CNEP1R1-206ENST00000565556 NBPF4Q96M43 638 aa12.21□□□□□ -0.45
CNEP1R1-206ENST00000565556 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.45
CNEP1R1-206ENST00000565556 NCAPD2Q15021 1401 aa12.21□□□□□ -0.46
CNEP1R1-206ENST00000565556 DLG5Q8TDM6 1919 aa12.2□□□□□ -0.46
CNEP1R1-206ENST00000565556 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
CNEP1R1-206ENST00000565556 CHRNA2Q15822 529 aa12.2□□□□□ -0.46
CNEP1R1-206ENST00000565556 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
CNEP1R1-206ENST00000565556 IL16Q14005 1332 aa12.2□□□□□ -0.46
CNEP1R1-206ENST00000565556 LMO7Q8WWI1 1683 aa12.2□□□□□ -0.46
CNEP1R1-206ENST00000565556 DEKP35659 375 aaKnown RBP12.2□□□□□ -0.46
CNEP1R1-206ENST00000565556 TRMT2AQ8IZ69 625 aaKnown RBP12.2□□□□□ -0.46
CNEP1R1-206ENST00000565556 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms