RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TRPM1Q7Z4N2 1603 aa8.98□□□□□ -0.97
TCF4-228ENST00000565393 QRICH2Q9H0J4 1663 aa8.97□□□□□ -0.97
TCF4-228ENST00000565393 ANKRD24Q8TF21 1146 aa8.97□□□□□ -0.97
TCF4-228ENST00000565393 COG3Q96JB2 828 aa8.97□□□□□ -0.97
TCF4-228ENST00000565393 BCL11BQ9C0K0 894 aaPredicted RBP8.97□□□□□ -0.97
TCF4-228ENST00000565393 TOPAZ1Q8N9V7 1692 aa8.97□□□□□ -0.97
TCF4-228ENST00000565393 NRAPQ86VF7 1730 aa8.97□□□□□ -0.97
TCF4-228ENST00000565393 BRWD3Q6RI45 1802 aa8.96□□□□□ -0.97
TCF4-228ENST00000565393 FBLN1P23142 703 aa8.96□□□□□ -0.98
TCF4-228ENST00000565393 AMPHP49418 695 aa8.96□□□□□ -0.98
TCF4-228ENST00000565393 SBNO2Q9Y2G9 1366 aa8.96□□□□□ -0.98
TCF4-228ENST00000565393 NRKQ7Z2Y5 1582 aa8.95□□□□□ -0.98
TCF4-228ENST00000565393 PHRF1Q9P1Y6 1649 aaKnown RBP8.95□□□□□ -0.98
TCF4-228ENST00000565393 PLSCR1O15162 318 aa8.95□□□□□ -0.98
TCF4-228ENST00000565393 IL2RBP14784 551 aa8.95□□□□□ -0.98
TCF4-228ENST00000565393 CDCA8Q53HL2 280 aa8.95□□□□□ -0.98
TCF4-228ENST00000565393 PTF1AQ7RTS3 328 aa8.95□□□□□ -0.98
TCF4-228ENST00000565393 DDX54Q8TDD1 881 aaKnown RBP8.95□□□□□ -0.98
TCF4-228ENST00000565393 ACSBG1Q96GR2 724 aa8.95□□□□□ -0.98
TCF4-228ENST00000565393 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
TCF4-228ENST00000565393 USP31Q70CQ4 1352 aa8.95□□□□□ -0.98
TCF4-228ENST00000565393 IP6K1Q92551 441 aa8.94□□□□□ -0.98
TCF4-228ENST00000565393 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
TCF4-228ENST00000565393 A0A1W2PP64 1363 aa8.94□□□□□ -0.98
TCF4-228ENST00000565393 CCDC7Q96M83 1385 aa8.94□□□□□ -0.98
TCF4-228ENST00000565393 SLIT3O75094 1523 aa8.94□□□□□ -0.98
TCF4-228ENST00000565393 CRYBG1Q9Y4K1 1723 aa8.94□□□□□ -0.98
TCF4-228ENST00000565393 KCNQ2O43526 872 aa8.93□□□□□ -0.98
TCF4-228ENST00000565393 CCER1Q8TC90 406 aaPredicted RBP8.93□□□□□ -0.98
TCF4-228ENST00000565393 GGNBP2Q9H3C7 697 aa8.93□□□□□ -0.98
TCF4-228ENST00000565393 PARD3Q8TEW0 1356 aa8.93□□□□□ -0.98
TCF4-228ENST00000565393 OVOS2A0A0G2JMS6 1433 aa8.93□□□□□ -0.98
TCF4-228ENST00000565393 OVOS2A0A0J9YW53 1432 aa8.93□□□□□ -0.98
TCF4-228ENST00000565393 DISP2A7MBM2 1401 aa8.93□□□□□ -0.98
TCF4-228ENST00000565393 OVOS2Q6IE36 1432 aa8.93□□□□□ -0.98
TCF4-228ENST00000565393 EDC4Q6P2E9 1401 aaKnown RBP8.93□□□□□ -0.98
TCF4-228ENST00000565393 THSD7AQ9UPZ6 1657 aa8.93□□□□□ -0.98
TCF4-228ENST00000565393 CD163L1Q9NR16 1453 aa8.92□□□□□ -0.98
TCF4-228ENST00000565393 ERBB3P21860 1342 aa8.92□□□□□ -0.98
TCF4-228ENST00000565393 FYB1O15117 783 aa8.92□□□□□ -0.98
TCF4-228ENST00000565393 PROM2Q8N271 834 aa8.92□□□□□ -0.98
TCF4-228ENST00000565393 SPON1Q9HCB6 807 aa8.92□□□□□ -0.98
TCF4-228ENST00000565393 PPP1R1BQ9UD71 204 aaPredicted RBP8.92□□□□□ -0.98
TCF4-228ENST00000565393 LMO7Q8WWI1 1683 aa8.91□□□□□ -0.98
TCF4-228ENST00000565393 USP47Q96K76 1375 aa8.91□□□□□ -0.98
TCF4-228ENST00000565393 NINLQ9Y2I6 1382 aa8.91□□□□□ -0.98
TCF4-228ENST00000565393 MAP3K19Q56UN5 1328 aa8.91□□□□□ -0.98
TCF4-228ENST00000565393 RRS1Q15050 365 aaKnown RBP8.91□□□□□ -0.98
TCF4-228ENST00000565393 TXNRD1Q16881 649 aa8.91□□□□□ -0.98
TCF4-228ENST00000565393 STK32BQ9NY57 414 aa8.91□□□□□ -0.98
TCF4-228ENST00000565393 PPM1GO15355 546 aaPredicted RBP8.9□□□□□ -0.98
TCF4-228ENST00000565393 HOXC9P31274 260 aa8.9□□□□□ -0.98
TCF4-228ENST00000565393 SYTL4Q96C24 671 aaPredicted RBP8.9□□□□□ -0.98
TCF4-228ENST00000565393 PIK3C2AO00443 1686 aa8.9□□□□□ -0.98
TCF4-228ENST00000565393 ANKRD36BQ8N2N9 1353 aa8.89□□□□□ -0.99
TCF4-228ENST00000565393 DCAF8L1A6NGE4 600 aa8.89□□□□□ -0.99
TCF4-228ENST00000565393 ZCRB1Q8TBF4 217 aaKnown RBP8.89□□□□□ -0.99
TCF4-228ENST00000565393 CARD14Q9BXL6 1004 aa8.89□□□□□ -0.99
TCF4-228ENST00000565393 CLSPNQ9HAW4 1339 aa8.88□□□□□ -0.99
TCF4-228ENST00000565393 PRIM1P49642 420 aaKnown RBP8.88□□□□□ -0.99
TCF4-228ENST00000565393 SLC15A2Q16348 729 aa8.88□□□□□ -0.99
TCF4-228ENST00000565393 ATF5Q9Y2D1 282 aaPredicted RBP8.88□□□□□ -0.99
TCF4-228ENST00000565393 RGPD1P0DJD0 1748 aa8.88□□□□□ -0.99
TCF4-228ENST00000565393 NFAT5O94916 1531 aa8.87□□□□□ -0.99
TCF4-228ENST00000565393 ZBTB7AO95365 584 aa8.87□□□□□ -0.99
TCF4-228ENST00000565393 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.99
TCF4-228ENST00000565393 HSP90AB2PQ58FF8 381 aa8.87□□□□□ -0.99
TCF4-228ENST00000565393 NBPF6Q5VWK0 638 aa8.87□□□□□ -0.99
TCF4-228ENST00000565393 USHBP1Q8N6Y0 703 aa8.87□□□□□ -0.99
TCF4-228ENST00000565393 RAPGEF4Q8WZA2 1011 aa8.87□□□□□ -0.99
TCF4-228ENST00000565393 NBPF4Q96M43 638 aa8.87□□□□□ -0.99
TCF4-228ENST00000565393 ANO8Q9HCE9 1232 aaPredicted RBP8.87□□□□□ -0.99
TCF4-228ENST00000565393 TATP17735 454 aaPredicted RBP8.86□□□□□ -0.99
TCF4-228ENST00000565393 PDGFDQ9GZP0 370 aaPredicted RBP8.86□□□□□ -0.99
TCF4-228ENST00000565393 COL18A1P39060 1754 aa8.86□□□□□ -0.99
TCF4-228ENST00000565393 HSPA5P11021 654 aaKnown RBP8.85□□□□□ -0.99
TCF4-228ENST00000565393 TNNT2P45379 298 aaPredicted RBP8.85□□□□□ -0.99
TCF4-228ENST00000565393 BCL9O00512 1426 aa8.85□□□□□ -0.99
TCF4-228ENST00000565393 AKAP12Q02952 1782 aa8.84□□□□□ -0.99
TCF4-228ENST00000565393 KCNQ4P56696 695 aa8.84□□□□□ -0.99
TCF4-228ENST00000565393 EMILIN1Q9Y6C2 1016 aa8.84□□□□□ -0.99
TCF4-228ENST00000565393 CGNL1Q0VF96 1302 aa8.83□□□□□ -1
TCF4-228ENST00000565393 PARP4Q9UKK3 1724 aaKnown RBP8.83□□□□□ -1
TCF4-228ENST00000565393 TNS2Q63HR2 1409 aa8.83□□□□□ -1
TCF4-228ENST00000565393 MSH5O43196 834 aa8.83□□□□□ -1
TCF4-228ENST00000565393 SLC27A3Q5K4L6 730 aa8.83□□□□□ -1
TCF4-228ENST00000565393 PANK3Q9H999 370 aa8.83□□□□□ -1
TCF4-228ENST00000565393 LRRC4BQ9NT99 713 aa8.83□□□□□ -1
TCF4-228ENST00000565393 TFCP2L1Q9NZI6 479 aa8.83□□□□□ -1
TCF4-228ENST00000565393 SMG6Q86US8 1419 aaKnown RBP8.82□□□□□ -1
TCF4-228ENST00000565393 MPRIPQ6WCQ1 1025 aa8.82□□□□□ -1
TCF4-228ENST00000565393 MTFR1LQ9H019 292 aa8.82□□□□□ -1
TCF4-228ENST00000565393 LRRC37A3O60309 1634 aa8.82□□□□□ -1
TCF4-228ENST00000565393 INSRP06213 1382 aa8.82□□□□□ -1
TCF4-228ENST00000565393 MON2Q7Z3U7 1717 aa8.82□□□□□ -1
TCF4-228ENST00000565393 TNS1Q9HBL0 1735 aaKnown RBP8.82□□□□□ -1
TCF4-228ENST00000565393 NSD3Q9BZ95 1437 aa8.81□□□□□ -1
TCF4-228ENST00000565393 ABCC6O95255 1503 aa8.81□□□□□ -1
TCF4-228ENST00000565393 POLKQ9UBT6 870 aa8.81□□□□□ -1
TCF4-228ENST00000565393 CCNL1Q9UK58 526 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms