RNA–Protein interactions for RNA: ENST00000565215.1

LINC01227-204, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 3

Gene LINC01227, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-204ENST00000565215 ARID3AQ99856 593 aa6.96□□□□□ -1.3
LINC01227-204ENST00000565215 RGS20O76081 388 aa6.95□□□□□ -1.3
LINC01227-204ENST00000565215 FSHRP23945 695 aa6.95□□□□□ -1.3
LINC01227-204ENST00000565215 ARID5BQ14865 1188 aa6.95□□□□□ -1.3
LINC01227-204ENST00000565215 INTS6LQ5JSJ4 861 aaKnown RBP6.95□□□□□ -1.3
LINC01227-204ENST00000565215 MPNDQ8N594 471 aa6.95□□□□□ -1.3
LINC01227-204ENST00000565215 KCTD15Q96SI1 283 aaPredicted RBP6.95□□□□□ -1.3
LINC01227-204ENST00000565215 SERPINA10Q9UK55 444 aa6.95□□□□□ -1.3
LINC01227-204ENST00000565215 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
LINC01227-204ENST00000565215 PALM3A6NDB9 673 aaPredicted RBP6.94□□□□□ -1.3
LINC01227-204ENST00000565215 ADH1CP00326 375 aa6.94□□□□□ -1.3
LINC01227-204ENST00000565215 GRM5P41594 1212 aa6.94□□□□□ -1.3
LINC01227-204ENST00000565215 CFAP70Q5T0N1 1121 aa6.94□□□□□ -1.3
LINC01227-204ENST00000565215 RNF135Q8IUD6 432 aa6.94□□□□□ -1.3
LINC01227-204ENST00000565215 CCDC85AQ96PX6 553 aaPredicted RBP6.94□□□□□ -1.3
LINC01227-204ENST00000565215 PPP1R12CQ9BZL4 782 aa6.94□□□□□ -1.3
LINC01227-204ENST00000565215 CHIC2Q9UKJ5 165 aa6.94□□□□□ -1.3
LINC01227-204ENST00000565215 RAB15P59190 212 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 PRR20EP86478 221 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 PRR20CP86479 221 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 PRR20DP86480 221 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 PRR20BP86481 221 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 PRR20AP86496 221 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 TSGA10IPQ3SY00 556 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 SLFNL1Q499Z3 407 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 NFATC2IPQ8NCF5 419 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 TOR4AQ9NXH8 423 aa6.93□□□□□ -1.3
LINC01227-204ENST00000565215 TFIP11Q9UBB9 837 aaKnown RBP6.93□□□□□ -1.3
LINC01227-204ENST00000565215 MAFBQ9Y5Q3 323 aaPredicted RBP6.93□□□□□ -1.3
LINC01227-204ENST00000565215 J3QL48 77 aa6.92□□□□□ -1.3
LINC01227-204ENST00000565215 ATP9BO43861 1147 aa6.92□□□□□ -1.3
LINC01227-204ENST00000565215 ALDH1A1P00352 501 aa6.92□□□□□ -1.3
LINC01227-204ENST00000565215 NR3C2P08235 984 aa6.92□□□□□ -1.3
LINC01227-204ENST00000565215 SKIP12755 728 aa6.92□□□□□ -1.3
LINC01227-204ENST00000565215 SEPT12Q8IYM1 358 aa6.92□□□□□ -1.3
LINC01227-204ENST00000565215 PLPP7Q8NBV4 271 aa6.92□□□□□ -1.3
LINC01227-204ENST00000565215 SNIP1Q8TAD8 396 aaKnown RBP6.92□□□□□ -1.3
LINC01227-204ENST00000565215 USP17L5A8MUK1 530 aa6.91□□□□□ -1.3
LINC01227-204ENST00000565215 TRAF7Q6Q0C0 670 aa6.91□□□□□ -1.3
LINC01227-204ENST00000565215 TTC24A2A3L6 582 aaPredicted RBP6.9□□□□□ -1.3
LINC01227-204ENST00000565215 USP17L3A6NCW0 530 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 USP17L4A6NCW7 530 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 ERVH48-1M5A8F1 160 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 SMPD1P17405 629 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 NR5A1Q13285 461 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 RNF20Q5VTR2 975 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 USP17L2Q6R6M4 530 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 USP17L1Q7RTZ2 530 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
LINC01227-204ENST00000565215 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
LINC01227-204ENST00000565215 RFX1P22670 979 aa6.89□□□□□ -1.31
LINC01227-204ENST00000565215 LMOD1P29536 600 aaPredicted RBP6.89□□□□□ -1.31
LINC01227-204ENST00000565215 NNTQ13423 1086 aa6.89□□□□□ -1.31
LINC01227-204ENST00000565215 PLEKHM2Q8IWE5 1019 aa6.89□□□□□ -1.31
LINC01227-204ENST00000565215 CCDC116Q8IYX3 515 aa6.89□□□□□ -1.31
LINC01227-204ENST00000565215 TMPRSS4Q9NRS4 437 aa6.89□□□□□ -1.31
LINC01227-204ENST00000565215 DOLKQ9UPQ8 538 aa6.89□□□□□ -1.31
LINC01227-204ENST00000565215 PCDHB11Q9Y5F2 797 aa6.89□□□□□ -1.31
LINC01227-204ENST00000565215 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.88□□□□□ -1.31
LINC01227-204ENST00000565215 SRPK2P78362 688 aaKnown RBP6.88□□□□□ -1.31
LINC01227-204ENST00000565215 NCOA4Q13772 614 aa6.88□□□□□ -1.31
LINC01227-204ENST00000565215 MAP7D1Q3KQU3 841 aa6.88□□□□□ -1.31
LINC01227-204ENST00000565215 OXLD1Q5BKU9 147 aa6.88□□□□□ -1.31
LINC01227-204ENST00000565215 PDZRN3Q9UPQ7 1066 aa6.88□□□□□ -1.31
LINC01227-204ENST00000565215 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
LINC01227-204ENST00000565215 SCTRP47872 440 aa6.87□□□□□ -1.31
LINC01227-204ENST00000565215 PPP1R26Q5T8A7 1209 aaPredicted RBP6.87□□□□□ -1.31
LINC01227-204ENST00000565215 ZNF784Q8NCA9 323 aaPredicted RBP6.87□□□□□ -1.31
LINC01227-204ENST00000565215 KLF16Q9BXK1 252 aaPredicted RBP6.86□□□□□ -1.31
LINC01227-204ENST00000565215 CYLDQ9NQC7 956 aa6.86□□□□□ -1.31
LINC01227-204ENST00000565215 LILRA1O75019 489 aa6.85□□□□□ -1.31
LINC01227-204ENST00000565215 ERVK-9P63128 1117 aa6.85□□□□□ -1.31
LINC01227-204ENST00000565215 DHX9Q08211 1270 aaKnown RBP6.85□□□□□ -1.31
LINC01227-204ENST00000565215 EML3Q32P44 896 aa6.85□□□□□ -1.31
LINC01227-204ENST00000565215 KANK4Q5T7N3 995 aaPredicted RBP6.85□□□□□ -1.31
LINC01227-204ENST00000565215 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
LINC01227-204ENST00000565215 HPS1Q92902 700 aa6.85□□□□□ -1.31
LINC01227-204ENST00000565215 ITPKCQ96DU7 683 aa6.85□□□□□ -1.31
LINC01227-204ENST00000565215 TIMP2P16035 220 aa6.84□□□□□ -1.31
LINC01227-204ENST00000565215 CDCA8Q53HL2 280 aa6.84□□□□□ -1.31
LINC01227-204ENST00000565215 PBXIP1Q96AQ6 731 aa6.84□□□□□ -1.31
LINC01227-204ENST00000565215 ZFAND3Q9H8U3 227 aa6.84□□□□□ -1.31
LINC01227-204ENST00000565215 EMILIN1Q9Y6C2 1016 aa6.84□□□□□ -1.31
LINC01227-204ENST00000565215 FAM187AA6NFU0 413 aa6.83□□□□□ -1.32
LINC01227-204ENST00000565215 LZTS3O60299 673 aaPredicted RBP6.83□□□□□ -1.32
LINC01227-204ENST00000565215 ZIC2O95409 532 aaPredicted RBP6.83□□□□□ -1.32
LINC01227-204ENST00000565215 WDR4P57081 412 aaKnown RBP6.83□□□□□ -1.32
LINC01227-204ENST00000565215 CC2D2BQ6DHV5 1058 aa6.83□□□□□ -1.32
LINC01227-204ENST00000565215 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
LINC01227-204ENST00000565215 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
LINC01227-204ENST00000565215 MKRN1Q9UHC7 482 aaKnown RBP6.83□□□□□ -1.32
LINC01227-204ENST00000565215 ADD1P35611 737 aaKnown RBP6.82□□□□□ -1.32
LINC01227-204ENST00000565215 CLDN10P78369 228 aa6.82□□□□□ -1.32
LINC01227-204ENST00000565215 MYT1Q01538 1121 aa6.82□□□□□ -1.32
LINC01227-204ENST00000565215 CBLBQ13191 982 aa6.82□□□□□ -1.32
LINC01227-204ENST00000565215 KIAA1024Q9UPX6 916 aa6.82□□□□□ -1.32
LINC01227-204ENST00000565215 NOD1Q9Y239 953 aa6.82□□□□□ -1.32
LINC01227-204ENST00000565215 ATP5J2-PTCD1G3V325 749 aa6.81□□□□□ -1.32
LINC01227-204ENST00000565215 NRG2O14511 850 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms