RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 MDM2Q00987 491 aaPredicted RBP8.16□□□□□ -1.1
RBFOX1-216ENST00000564850 C4orf48Q5BLP8 95 aa8.16□□□□□ -1.1
RBFOX1-216ENST00000564850 VASH1Q7L8A9 365 aaPredicted RBP8.16□□□□□ -1.1
RBFOX1-216ENST00000564850 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
RBFOX1-216ENST00000564850 ACDQ96AP0 544 aa8.16□□□□□ -1.1
RBFOX1-216ENST00000564850 SEMA6BQ9H3T3 888 aa8.16□□□□□ -1.1
RBFOX1-216ENST00000564850 CTSOP43234 321 aaPredicted RBP8.15□□□□□ -1.1
RBFOX1-216ENST00000564850 CBLBQ13191 982 aa8.15□□□□□ -1.1
RBFOX1-216ENST00000564850 DESI1Q6ICB0 168 aa8.15□□□□□ -1.1
RBFOX1-216ENST00000564850 LRRC4BQ9NT99 713 aa8.15□□□□□ -1.1
RBFOX1-216ENST00000564850 MKL2Q9ULH7 1088 aa8.15□□□□□ -1.1
RBFOX1-216ENST00000564850 Q6ZVU0 165 aa8.14□□□□□ -1.11
RBFOX1-216ENST00000564850 CUEDC1Q9NWM3 386 aaPredicted RBP8.14□□□□□ -1.11
RBFOX1-216ENST00000564850 MAP4K5Q9Y4K4 846 aa8.14□□□□□ -1.11
RBFOX1-216ENST00000564850 COL8A1P27658 744 aa8.13□□□□□ -1.11
RBFOX1-216ENST00000564850 SNRPNP63162 240 aaKnown RBP8.13□□□□□ -1.11
RBFOX1-216ENST00000564850 SMYD5Q6GMV2 418 aa8.13□□□□□ -1.11
RBFOX1-216ENST00000564850 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
RBFOX1-216ENST00000564850 POLMQ9NP87 494 aaPredicted RBP8.13□□□□□ -1.11
RBFOX1-216ENST00000564850 PGPEP1Q9NXJ5 209 aa8.13□□□□□ -1.11
RBFOX1-216ENST00000564850 INSM2Q96T92 566 aaPredicted RBP8.12□□□□□ -1.11
RBFOX1-216ENST00000564850 KRTAP4-7Q9BYR0 210 aa8.12□□□□□ -1.11
RBFOX1-216ENST00000564850 GPR25O00155 361 aa8.11□□□□□ -1.11
RBFOX1-216ENST00000564850 GRIN2CQ14957 1233 aa8.11□□□□□ -1.11
RBFOX1-216ENST00000564850 RNF217Q8TC41 542 aa8.11□□□□□ -1.11
RBFOX1-216ENST00000564850 C1QTNF9BB2RNN3 333 aa8.09□□□□□ -1.11
RBFOX1-216ENST00000564850 OIP5O43482 229 aa8.09□□□□□ -1.11
RBFOX1-216ENST00000564850 PPP1R26Q5T8A7 1209 aaPredicted RBP8.09□□□□□ -1.11
RBFOX1-216ENST00000564850 NBPF11Q86T75 865 aa8.09□□□□□ -1.11
RBFOX1-216ENST00000564850 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
RBFOX1-216ENST00000564850 MAP10Q9P2G4 905 aa8.09□□□□□ -1.11
RBFOX1-216ENST00000564850 SLC24A1O60721 1099 aa8.08□□□□□ -1.12
RBFOX1-216ENST00000564850 RELBQ01201 579 aa8.08□□□□□ -1.12
RBFOX1-216ENST00000564850 LYPD8Q6UX82 237 aa8.08□□□□□ -1.12
RBFOX1-216ENST00000564850 P3H3Q8IVL6 736 aa8.08□□□□□ -1.12
RBFOX1-216ENST00000564850 ZNF837Q96EG3 531 aaPredicted RBP8.08□□□□□ -1.12
RBFOX1-216ENST00000564850 AGBL1Q96MI9 1066 aa8.08□□□□□ -1.12
RBFOX1-216ENST00000564850 ZFP64Q9NPA5 681 aa8.08□□□□□ -1.12
RBFOX1-216ENST00000564850 NSFL1CQ9UNZ2 370 aaKnown RBP8.08□□□□□ -1.12
RBFOX1-216ENST00000564850 SPDYE5A6NIY4 337 aa8.07□□□□□ -1.12
RBFOX1-216ENST00000564850 MTMR2Q13614 643 aa8.07□□□□□ -1.12
RBFOX1-216ENST00000564850 GMCL1Q96IK5 515 aa8.07□□□□□ -1.12
RBFOX1-216ENST00000564850 RRAGCQ9HB90 399 aa8.07□□□□□ -1.12
RBFOX1-216ENST00000564850 TESPA1A2RU30 521 aaPredicted RBP8.06□□□□□ -1.12
RBFOX1-216ENST00000564850 DOC2BQ14184 412 aa8.06□□□□□ -1.12
RBFOX1-216ENST00000564850 CD163Q86VB7 1156 aa8.05□□□□□ -1.12
RBFOX1-216ENST00000564850 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
RBFOX1-216ENST00000564850 TRIM22Q8IYM9 498 aa8.05□□□□□ -1.12
RBFOX1-216ENST00000564850 FAM217BQ9NTX9 383 aaPredicted RBP8.05□□□□□ -1.12
RBFOX1-216ENST00000564850 F12P00748 615 aaPredicted RBP8.04□□□□□ -1.12
RBFOX1-216ENST00000564850 ARTNQ5T4W7 220 aa8.04□□□□□ -1.12
RBFOX1-216ENST00000564850 GPIHBP1Q8IV16 184 aa8.04□□□□□ -1.12
RBFOX1-216ENST00000564850 TRERF1Q96PN7 1200 aa8.04□□□□□ -1.12
RBFOX1-216ENST00000564850 MX2P20592 715 aa8.03□□□□□ -1.12
RBFOX1-216ENST00000564850 LCE1DQ5T752 114 aa8.03□□□□□ -1.12
RBFOX1-216ENST00000564850 NDUFV2P19404 249 aa8.02□□□□□ -1.13
RBFOX1-216ENST00000564850 MAP2K5Q13163 448 aa8.02□□□□□ -1.13
RBFOX1-216ENST00000564850 FOXD4L6Q3SYB3 417 aaPredicted RBP8.02□□□□□ -1.13
RBFOX1-216ENST00000564850 PRPF38BQ5VTL8 546 aaKnown RBP8.02□□□□□ -1.13
RBFOX1-216ENST00000564850 FOXD4L3Q6VB84 417 aaPredicted RBP8.02□□□□□ -1.13
RBFOX1-216ENST00000564850 OXCT2Q9BYC2 517 aaPredicted RBP8.02□□□□□ -1.13
RBFOX1-216ENST00000564850 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
RBFOX1-216ENST00000564850 MAGEB6P1A0A0J9YX57 407 aa8.01□□□□□ -1.13
RBFOX1-216ENST00000564850 SHISA8B8ZZ34 492 aa8.01□□□□□ -1.13
RBFOX1-216ENST00000564850 COBLO75128 1261 aa8.01□□□□□ -1.13
RBFOX1-216ENST00000564850 CHRNA4P43681 627 aa8.01□□□□□ -1.13
RBFOX1-216ENST00000564850 LYSMD3Q7Z3D4 306 aa8.01□□□□□ -1.13
RBFOX1-216ENST00000564850 ZNF395Q9H8N7 513 aaPredicted RBP8.01□□□□□ -1.13
RBFOX1-216ENST00000564850 PIK3R2O00459 728 aa8□□□□□ -1.13
RBFOX1-216ENST00000564850 CLCN1P35523 988 aa8□□□□□ -1.13
RBFOX1-216ENST00000564850 RIPOR1Q6ZS17 1223 aa8□□□□□ -1.13
RBFOX1-216ENST00000564850 GTPBP3Q969Y2 492 aaKnown RBP8□□□□□ -1.13
RBFOX1-216ENST00000564850 SUV39H2Q9H5I1 410 aa8□□□□□ -1.13
RBFOX1-216ENST00000564850 FOXD4L5Q5VV16 416 aaPredicted RBP7.99□□□□□ -1.13
RBFOX1-216ENST00000564850 ARMC2Q8NEN0 867 aa7.99□□□□□ -1.13
RBFOX1-216ENST00000564850 MOXD2PA6NHM9 499 aa7.98□□□□□ -1.13
RBFOX1-216ENST00000564850 DHX9Q08211 1270 aaKnown RBP7.98□□□□□ -1.13
RBFOX1-216ENST00000564850 DBN1Q16643 649 aa7.98□□□□□ -1.13
RBFOX1-216ENST00000564850 MAP2K3P46734 347 aa7.97□□□□□ -1.13
RBFOX1-216ENST00000564850 NBPF14Q5TI25 921 aa7.97□□□□□ -1.13
RBFOX1-216ENST00000564850 SPIRE2Q8WWL2 714 aa7.97□□□□□ -1.13
RBFOX1-216ENST00000564850 CARD14Q9BXL6 1004 aa7.97□□□□□ -1.13
RBFOX1-216ENST00000564850 H7C1W4 665 aa7.96□□□□□ -1.14
RBFOX1-216ENST00000564850 IRF6O14896 467 aa7.96□□□□□ -1.14
RBFOX1-216ENST00000564850 GNB5O14775 395 aa7.95□□□□□ -1.14
RBFOX1-216ENST00000564850 RHOQP17081 205 aa7.95□□□□□ -1.14
RBFOX1-216ENST00000564850 SH3BP5LQ7L8J4 393 aa7.95□□□□□ -1.14
RBFOX1-216ENST00000564850 CFAP99D6REC4 459 aa7.94□□□□□ -1.14
RBFOX1-216ENST00000564850 LINC00114Q6XXX2 140 aa7.94□□□□□ -1.14
RBFOX1-216ENST00000564850 PRICKLE2Q7Z3G6 844 aa7.94□□□□□ -1.14
RBFOX1-216ENST00000564850 AMPD1P23109 780 aa7.93□□□□□ -1.14
RBFOX1-216ENST00000564850 GATA4P43694 442 aa7.93□□□□□ -1.14
RBFOX1-216ENST00000564850 KRI1Q8N9T8 703 aaKnown RBP7.93□□□□□ -1.14
RBFOX1-216ENST00000564850 NOP53Q9NZM5 478 aaKnown RBP7.93□□□□□ -1.14
RBFOX1-216ENST00000564850 ERFEQ4G0M1 354 aa7.92□□□□□ -1.14
RBFOX1-216ENST00000564850 EDARADDQ8WWZ3 215 aa7.92□□□□□ -1.14
RBFOX1-216ENST00000564850 KCTD15Q96SI1 283 aaPredicted RBP7.92□□□□□ -1.14
RBFOX1-216ENST00000564850 RSPO4Q2I0M5 234 aaPredicted RBP7.91□□□□□ -1.14
RBFOX1-216ENST00000564850 C1orf229Q6ZS94 237 aaPredicted RBP7.91□□□□□ -1.14
RBFOX1-216ENST00000564850 GDF2Q9UK05 429 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms