RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 UTRNP46939 3433 aa12.12□□□□□ -0.47
PKM-212ENST00000564440 SMG6Q86US8 1419 aaKnown RBP12.12□□□□□ -0.47
PKM-212ENST00000564440 PPIP5K1Q6PFW1 1433 aa12.12□□□□□ -0.47
PKM-212ENST00000564440 ANKRD36BQ8N2N9 1353 aa12.12□□□□□ -0.47
PKM-212ENST00000564440 ARHGEF10O15013 1369 aa12.11□□□□□ -0.47
PKM-212ENST00000564440 PNPLA6Q8IY17 1366 aa12.11□□□□□ -0.47
PKM-212ENST00000564440 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
PKM-212ENST00000564440 SKAP1Q86WV1 359 aa12.11□□□□□ -0.47
PKM-212ENST00000564440 JCADQ9P266 1359 aa12.11□□□□□ -0.47
PKM-212ENST00000564440 USP19O94966 1318 aa12.11□□□□□ -0.47
PKM-212ENST00000564440 U2AF1L5P0DN76 240 aaPredicted RBP12.11□□□□□ -0.47
PKM-212ENST00000564440 U2AF1Q01081 240 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■□□□□ 9
PKM-212ENST00000564440 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
PKM-212ENST00000564440 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
PKM-212ENST00000564440 PLEKHG2Q9H7P9 1386 aa12.1□□□□□ -0.47
PKM-212ENST00000564440 OVOS2A0A0J9YW53 1432 aa12.09□□□□□ -0.47
PKM-212ENST00000564440 OVOS2Q6IE36 1432 aa12.09□□□□□ -0.47
PKM-212ENST00000564440 RNF123Q5XPI4 1314 aa12.09□□□□□ -0.47
PKM-212ENST00000564440 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
PKM-212ENST00000564440 LTV1Q96GA3 475 aaPredicted RBP12.09□□□□□ -0.47
PKM-212ENST00000564440 BCL2L13Q9BXK5 485 aa12.09□□□□□ -0.47
PKM-212ENST00000564440 NSD2O96028 1365 aa12.08□□□□□ -0.48
PKM-212ENST00000564440 LTN1O94822 1766 aa12.08□□□□□ -0.48
PKM-212ENST00000564440 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
PKM-212ENST00000564440 CPDO75976 1380 aa12.08□□□□□ -0.48
PKM-212ENST00000564440 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
PKM-212ENST00000564440 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
PKM-212ENST00000564440 NGDNQ8NEJ9 315 aaKnown RBP12.07□□□□□ -0.48
PKM-212ENST00000564440 CGNL1Q0VF96 1302 aa12.07□□□□□ -0.48
PKM-212ENST00000564440 UBAP1LF5GYI3 381 aa12.07□□□□□ -0.48
PKM-212ENST00000564440 KIF24Q5T7B8 1368 aa12.07□□□□□ -0.48
PKM-212ENST00000564440 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
PKM-212ENST00000564440 FOXO3O43524 673 aa12.06□□□□□ -0.48
PKM-212ENST00000564440 ORAI2Q96SN7 254 aa12.06□□□□□ -0.48
PKM-212ENST00000564440 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
PKM-212ENST00000564440 ACEP12821 1306 aa12.05□□□□□ -0.48
PKM-212ENST00000564440 LRP6O75581 1613 aa12.05□□□□□ -0.48
PKM-212ENST00000564440 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
PKM-212ENST00000564440 HDGFL2Q7Z4V5 671 aaPredicted RBP12.05□□□□□ -0.48
PKM-212ENST00000564440 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
PKM-212ENST00000564440 TERF2IPQ9NYB0 399 aa12.04□□□□□ -0.48
PKM-212ENST00000564440 LAS1LQ9Y4W2 734 aaKnown RBP12.04□□□□□ -0.48
PKM-212ENST00000564440 SLIT2O94813 1529 aa12.04□□□□□ -0.48
PKM-212ENST00000564440 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
PKM-212ENST00000564440 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
PKM-212ENST00000564440 PSME1Q06323 249 aa12.03□□□□□ -0.48
PKM-212ENST00000564440 C20orf194Q5TEA3 1177 aa12.03□□□□□ -0.48
PKM-212ENST00000564440 THSD7AQ9UPZ6 1657 aa12.03□□□□□ -0.48
PKM-212ENST00000564440 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
PKM-212ENST00000564440 ELL2O00472 640 aaPredicted RBP12.02□□□□□ -0.49
PKM-212ENST00000564440 DCTN1Q14203 1278 aa12.02□□□□□ -0.49
PKM-212ENST00000564440 LRRC59Q96AG4 307 aaKnown RBP12.02□□□□□ -0.49
PKM-212ENST00000564440 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
PKM-212ENST00000564440 PARP4Q9UKK3 1724 aaKnown RBP12.02□□□□□ -0.49
PKM-212ENST00000564440 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
PKM-212ENST00000564440 AATKQ6ZMQ8 1374 aa12.01□□□□□ -0.49
PKM-212ENST00000564440 HSP90AB2PQ58FF8 381 aa12.01□□□□□ -0.49
PKM-212ENST00000564440 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
PKM-212ENST00000564440 USHBP1Q8N6Y0 703 aa12□□□□□ -0.49
PKM-212ENST00000564440 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
PKM-212ENST00000564440 USP35Q9P2H5 1018 aa12□□□□□ -0.49
PKM-212ENST00000564440 RTL1A6NKG5 1358 aa12□□□□□ -0.49
PKM-212ENST00000564440 FAM83GA6ND36 823 aa12□□□□□ -0.49
PKM-212ENST00000564440 NEFMP07197 916 aa12□□□□□ -0.49
PKM-212ENST00000564440 IL27Q8NEV9 243 aa12□□□□□ -0.49
PKM-212ENST00000564440 TNNQ9UQP3 1299 aa12□□□□□ -0.49
PKM-212ENST00000564440 EP400Q96L91 3159 aa12□□□□□ -0.49
PKM-212ENST00000564440 PEAK1Q9H792 1746 aa11.99□□□□□ -0.49
PKM-212ENST00000564440 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
PKM-212ENST00000564440 INSRP06213 1382 aa11.99□□□□□ -0.49
PKM-212ENST00000564440 BCAR3O75815 825 aa11.99□□□□□ -0.49
PKM-212ENST00000564440 PHACTR3Q96KR7 559 aa11.99□□□□□ -0.49
PKM-212ENST00000564440 NLRP6P59044 892 aa11.98□□□□□ -0.49
PKM-212ENST00000564440 ZNF428Q96B54 188 aa11.98□□□□□ -0.49
PKM-212ENST00000564440 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
PKM-212ENST00000564440 PDE4AP27815 886 aa11.97□□□□□ -0.49
PKM-212ENST00000564440 HSPA1LP34931 641 aa11.97□□□□□ -0.49
PKM-212ENST00000564440 RGPD5Q99666 1765 aa11.97□□□□□ -0.49
PKM-212ENST00000564440 ABTB2Q8N961 1025 aa11.97□□□□□ -0.49
PKM-212ENST00000564440 EXOC6Q8TAG9 804 aa11.97□□□□□ -0.49
PKM-212ENST00000564440 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
PKM-212ENST00000564440 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
PKM-212ENST00000564440 ATRNO75882 1429 aa11.97□□□□□ -0.49
PKM-212ENST00000564440 FRAT1Q92837 279 aaPredicted RBP11.97□□□□□ -0.49
PKM-212ENST00000564440 TTC21BQ7Z4L5 1316 aa11.96□□□□□ -0.49
PKM-212ENST00000564440 PKD1L3Q7Z443 1732 aa11.96□□□□□ -0.49
PKM-212ENST00000564440 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.49
PKM-212ENST00000564440 RGPD4Q7Z3J3 1758 aa11.96□□□□□ -0.49
PKM-212ENST00000564440 KRT28Q7Z3Y7 464 aa11.96□□□□□ -0.49
PKM-212ENST00000564440 COG3Q96JB2 828 aa11.96□□□□□ -0.49
PKM-212ENST00000564440 PRKAR2BP31323 418 aa11.96□□□□□ -0.5
PKM-212ENST00000564440 RRP1P56182 461 aaKnown RBP11.96□□□□□ -0.5
PKM-212ENST00000564440 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
PKM-212ENST00000564440 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
PKM-212ENST00000564440 RCAN3Q9UKA8 241 aa11.95□□□□□ -0.5
PKM-212ENST00000564440 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
PKM-212ENST00000564440 BACH2Q9BYV9 841 aa11.95□□□□□ -0.5
PKM-212ENST00000564440 SHANK3Q9BYB0 1731 aa11.94□□□□□ -0.5
PKM-212ENST00000564440 MS4A1P11836 297 aa11.94□□□□□ -0.5
PKM-212ENST00000564440 ZC3H6P61129 1189 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms