RNA–Protein interactions for RNA: ENST00000564239.1

BBS4-207, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-207ENST00000564239 NBPF20Q3BBV1 942 aa9.55□□□□□ -0.88
BBS4-207ENST00000564239 KCTD15Q96SI1 283 aaPredicted RBP9.55□□□□□ -0.88
BBS4-207ENST00000564239 WASF2Q9Y6W5 498 aa9.55□□□□□ -0.88
BBS4-207ENST00000564239 SOX11P35716 441 aa9.54□□□□□ -0.88
BBS4-207ENST00000564239 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
BBS4-207ENST00000564239 FSHRP23945 695 aa9.53□□□□□ -0.88
BBS4-207ENST00000564239 NR5A1Q13285 461 aa9.53□□□□□ -0.88
BBS4-207ENST00000564239 ALG2Q9H553 416 aa9.53□□□□□ -0.88
BBS4-207ENST00000564239 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
BBS4-207ENST00000564239 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
BBS4-207ENST00000564239 ESPNB1AK53 854 aa9.52□□□□□ -0.89
BBS4-207ENST00000564239 NR3C2P08235 984 aa9.52□□□□□ -0.89
BBS4-207ENST00000564239 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
BBS4-207ENST00000564239 ADAMTS19Q8TE59 1207 aa9.52□□□□□ -0.89
BBS4-207ENST00000564239 CEP126Q9P2H0 1117 aa9.52□□□□□ -0.89
BBS4-207ENST00000564239 GIGYF1O75420 1035 aaPredicted RBP9.51□□□□□ -0.89
BBS4-207ENST00000564239 NNTQ13423 1086 aa9.51□□□□□ -0.89
BBS4-207ENST00000564239 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
BBS4-207ENST00000564239 DGAT1O75907 488 aa9.5□□□□□ -0.89
BBS4-207ENST00000564239 HPS1Q92902 700 aa9.5□□□□□ -0.89
BBS4-207ENST00000564239 HDGFL1Q5TGJ6 251 aa9.49□□□□□ -0.89
BBS4-207ENST00000564239 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
BBS4-207ENST00000564239 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
BBS4-207ENST00000564239 AVPP01185 164 aa9.48□□□□□ -0.89
BBS4-207ENST00000564239 RAB15P59190 212 aa9.48□□□□□ -0.89
BBS4-207ENST00000564239 PKDCCQ504Y2 493 aa9.48□□□□□ -0.89
BBS4-207ENST00000564239 CCDC116Q8IYX3 515 aa9.48□□□□□ -0.89
BBS4-207ENST00000564239 PHTF2Q8N3S3 785 aa9.47□□□□□ -0.89
BBS4-207ENST00000564239 GLMNQ92990 594 aa9.47□□□□□ -0.89
BBS4-207ENST00000564239 KLF16Q9BXK1 252 aaPredicted RBP9.47□□□□□ -0.89
BBS4-207ENST00000564239 PPP1R26Q5T8A7 1209 aaPredicted RBP9.46□□□□□ -0.9
BBS4-207ENST00000564239 RNF20Q5VTR2 975 aa9.46□□□□□ -0.9
BBS4-207ENST00000564239 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
BBS4-207ENST00000564239 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
BBS4-207ENST00000564239 SLFNL1Q499Z3 407 aa9.45□□□□□ -0.9
BBS4-207ENST00000564239 TIMP2P16035 220 aa9.44□□□□□ -0.9
BBS4-207ENST00000564239 WDR4P57081 412 aaKnown RBP9.44□□□□□ -0.9
BBS4-207ENST00000564239 CCDC125Q86Z20 511 aa9.44□□□□□ -0.9
BBS4-207ENST00000564239 ITPKCQ96DU7 683 aa9.44□□□□□ -0.9
BBS4-207ENST00000564239 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
BBS4-207ENST00000564239 EMILIN1Q9Y6C2 1016 aa9.44□□□□□ -0.9
BBS4-207ENST00000564239 PIK3CDO00329 1044 aa9.43□□□□□ -0.9
BBS4-207ENST00000564239 MYT1Q01538 1121 aa9.43□□□□□ -0.9
BBS4-207ENST00000564239 TSGA10IPQ3SY00 556 aa9.43□□□□□ -0.9
BBS4-207ENST00000564239 RNF135Q8IUD6 432 aa9.43□□□□□ -0.9
BBS4-207ENST00000564239 CCDC85AQ96PX6 553 aaPredicted RBP9.43□□□□□ -0.9
BBS4-207ENST00000564239 TMPRSS4Q9NRS4 437 aa9.43□□□□□ -0.9
BBS4-207ENST00000564239 CHIC2Q9UKJ5 165 aa9.43□□□□□ -0.9
BBS4-207ENST00000564239 ZIC2O95409 532 aaPredicted RBP9.42□□□□□ -0.9
BBS4-207ENST00000564239 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
BBS4-207ENST00000564239 Q6ZNB5 142 aa9.42□□□□□ -0.9
BBS4-207ENST00000564239 CRIPAKQ8N1N5 446 aa9.42□□□□□ -0.9
BBS4-207ENST00000564239 UCN2Q96RP3 112 aa9.42□□□□□ -0.9
BBS4-207ENST00000564239 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
BBS4-207ENST00000564239 PGPEP1Q9NXJ5 209 aa9.42□□□□□ -0.9
BBS4-207ENST00000564239 CTC1Q2NKJ3 1217 aa9.41□□□□□ -0.9
BBS4-207ENST00000564239 ZNF784Q8NCA9 323 aaPredicted RBP9.41□□□□□ -0.9
BBS4-207ENST00000564239 PCDHB11Q9Y5F2 797 aa9.41□□□□□ -0.9
BBS4-207ENST00000564239 ARID3CA6NKF2 412 aa9.4□□□□□ -0.9
BBS4-207ENST00000564239 CAPN5O15484 640 aaPredicted RBP9.4□□□□□ -0.9
BBS4-207ENST00000564239 NFATC2IPQ8NCF5 419 aa9.4□□□□□ -0.9
BBS4-207ENST00000564239 LCE2BO14633 110 aa9.39□□□□□ -0.91
BBS4-207ENST00000564239 AXIN1O15169 862 aa9.39□□□□□ -0.91
BBS4-207ENST00000564239 LILRA1O75019 489 aa9.39□□□□□ -0.91
BBS4-207ENST00000564239 PLPP7Q8NBV4 271 aa9.39□□□□□ -0.91
BBS4-207ENST00000564239 CDCA7Q9BWT1 371 aaPredicted RBP9.39□□□□□ -0.91
BBS4-207ENST00000564239 ST8SIA5O15466 376 aa9.38□□□□□ -0.91
BBS4-207ENST00000564239 SKIP12755 728 aa9.38□□□□□ -0.91
BBS4-207ENST00000564239 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
BBS4-207ENST00000564239 TRAF7Q6Q0C0 670 aa9.38□□□□□ -0.91
BBS4-207ENST00000564239 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
BBS4-207ENST00000564239 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
BBS4-207ENST00000564239 AAASQ9NRG9 546 aa9.38□□□□□ -0.91
BBS4-207ENST00000564239 DOLKQ9UPQ8 538 aa9.38□□□□□ -0.91
BBS4-207ENST00000564239 SCTRP47872 440 aa9.37□□□□□ -0.91
BBS4-207ENST00000564239 ERVK-9P63128 1117 aa9.37□□□□□ -0.91
BBS4-207ENST00000564239 CBLBQ13191 982 aa9.37□□□□□ -0.91
BBS4-207ENST00000564239 ADD1P35611 737 aaKnown RBP9.36□□□□□ -0.91
BBS4-207ENST00000564239 Q6ZVU0 165 aa9.36□□□□□ -0.91
BBS4-207ENST00000564239 C1orf115Q9H7X2 142 aa9.36□□□□□ -0.91
BBS4-207ENST00000564239 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
BBS4-207ENST00000564239 ATP9BO43861 1147 aa9.35□□□□□ -0.91
BBS4-207ENST00000564239 CC2D2BQ6DHV5 1058 aa9.35□□□□□ -0.91
BBS4-207ENST00000564239 MEIOBQ8N635 442 aa9.35□□□□□ -0.91
BBS4-207ENST00000564239 TRIM52Q96A61 297 aa9.35□□□□□ -0.91
BBS4-207ENST00000564239 PPP1R12CQ9BZL4 782 aa9.35□□□□□ -0.91
BBS4-207ENST00000564239 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
BBS4-207ENST00000564239 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
BBS4-207ENST00000564239 SUPT5HO00267 1087 aaKnown RBP9.34□□□□□ -0.91
BBS4-207ENST00000564239 OXLD1Q5BKU9 147 aa9.34□□□□□ -0.91
BBS4-207ENST00000564239 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
BBS4-207ENST00000564239 USP4Q13107 963 aa9.33□□□□□ -0.92
BBS4-207ENST00000564239 DEPDC4Q8N2C3 294 aa9.33□□□□□ -0.92
BBS4-207ENST00000564239 LZTS3O60299 673 aaPredicted RBP9.32□□□□□ -0.92
BBS4-207ENST00000564239 ADH1AP07327 375 aa9.32□□□□□ -0.92
BBS4-207ENST00000564239 BMP1P13497 986 aa9.32□□□□□ -0.92
BBS4-207ENST00000564239 NCOA4Q13772 614 aa9.32□□□□□ -0.92
BBS4-207ENST00000564239 TRIM46Q7Z4K8 759 aa9.32□□□□□ -0.92
BBS4-207ENST00000564239 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
BBS4-207ENST00000564239 KDF1Q8NAX2 398 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms