RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
ABCA3-203ENST00000563623 POLKQ9UBT6 870 aa14.58□□□□□ -0.08
ABCA3-203ENST00000563623 NUTM2FA1L443 756 aa14.57□□□□□ -0.08
ABCA3-203ENST00000563623 ARID3AQ99856 593 aa14.57□□□□□ -0.08
ABCA3-203ENST00000563623 MROH2AA6NES4 1674 aa14.57□□□□□ -0.08
ABCA3-203ENST00000563623 BCL11BQ9C0K0 894 aaPredicted RBP14.57□□□□□ -0.08
ABCA3-203ENST00000563623 ISY1Q9ULR0 285 aaKnown RBP14.57□□□□□ -0.08
ABCA3-203ENST00000563623 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
ABCA3-203ENST00000563623 PRPF40AO75400 957 aaKnown RBP14.56□□□□□ -0.08
ABCA3-203ENST00000563623 MLECQ14165 292 aa14.56□□□□□ -0.08
ABCA3-203ENST00000563623 NME9Q86XW9 330 aa14.56□□□□□ -0.08
ABCA3-203ENST00000563623 PPIP5K1Q6PFW1 1433 aa14.56□□□□□ -0.08
ABCA3-203ENST00000563623 KRT24Q2M2I5 525 aa14.56□□□□□ -0.08
ABCA3-203ENST00000563623 FBXO31Q5XUX0 539 aaPredicted RBP14.56□□□□□ -0.08
ABCA3-203ENST00000563623 SIRT2Q8IXJ6 389 aa14.56□□□□□ -0.08
ABCA3-203ENST00000563623 OTUD7AQ8TE49 926 aaPredicted RBP14.56□□□□□ -0.08
ABCA3-203ENST00000563623 KIF2CQ99661 725 aa14.55□□□□□ -0.08
ABCA3-203ENST00000563623 RABEP1Q15276 862 aa14.55□□□□□ -0.08
ABCA3-203ENST00000563623 RRP9O43818 475 aaKnown RBP14.55□□□□□ -0.08
ABCA3-203ENST00000563623 ST18O60284 1047 aa14.55□□□□□ -0.08
ABCA3-203ENST00000563623 PUS7Q96PZ0 661 aaKnown RBP14.55□□□□□ -0.08
ABCA3-203ENST00000563623 FGD1P98174 961 aa14.54□□□□□ -0.08
ABCA3-203ENST00000563623 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
ABCA3-203ENST00000563623 INTS3Q68E01 1043 aaKnown RBP14.54□□□□□ -0.08
ABCA3-203ENST00000563623 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
ABCA3-203ENST00000563623 NUCB2P80303 420 aa14.54□□□□□ -0.08
ABCA3-203ENST00000563623 CCDC173Q0VFZ6 552 aa14.54□□□□□ -0.08
ABCA3-203ENST00000563623 KIAA1211Q6ZU35 1233 aa14.54□□□□□ -0.08
ABCA3-203ENST00000563623 UHRF1BP1LA0JNW5 1464 aa14.54□□□□□ -0.08
ABCA3-203ENST00000563623 LMOD3Q0VAK6 560 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 PLEKHM2Q8IWE5 1019 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 CHAMP1Q96JM3 812 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 RBM27Q9P2N5 1060 aaKnown RBP14.53□□□□□ -0.08
ABCA3-203ENST00000563623 PTMAP06454 111 aaKnown RBP14.53□□□□□ -0.08
ABCA3-203ENST00000563623 GSPT1P15170 499 aaKnown RBP14.53□□□□□ -0.08
ABCA3-203ENST00000563623 ZNF428Q96B54 188 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 COG3Q96JB2 828 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 TULP4Q9NRJ4 1543 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 PKP1Q13835 747 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 RNF214Q8ND24 703 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 IFT57Q9NWB7 429 aa14.53□□□□□ -0.08
ABCA3-203ENST00000563623 DEPDC5O75140 1603 aa14.52□□□□□ -0.08
ABCA3-203ENST00000563623 PDIA4P13667 645 aaKnown RBP14.52□□□□□ -0.09
ABCA3-203ENST00000563623 ZGPATQ8N5A5 531 aaKnown RBP14.52□□□□□ -0.09
ABCA3-203ENST00000563623 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.09
ABCA3-203ENST00000563623 SLC52A1Q9NWF4 448 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 MIS18AQ9NYP9 233 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 ADGRB3O60242 1522 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 VWDEQ8N2E2 1590 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
ABCA3-203ENST00000563623 KLHL40Q2TBA0 621 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 TTC22Q5TAA0 569 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 R3HCC1Q9Y3T6 440 aaKnown RBP14.51□□□□□ -0.09
ABCA3-203ENST00000563623 NRXN1Q9ULB1 1477 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 DDIT3P35638 169 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 MCM10Q7L590 875 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 ARHGAP45Q92619 1136 aa14.51□□□□□ -0.09
ABCA3-203ENST00000563623 NCKAP5LQ9HCH0 1330 aa14.5□□□□□ -0.09
ABCA3-203ENST00000563623 TRIM6-TRIM34B2RNG4 842 aa14.5□□□□□ -0.09
ABCA3-203ENST00000563623 TSHZ3Q63HK5 1081 aa14.5□□□□□ -0.09
ABCA3-203ENST00000563623 NECTIN2Q92692 538 aa14.5□□□□□ -0.09
ABCA3-203ENST00000563623 ADGRB1O14514 1584 aa14.5□□□□□ -0.09
ABCA3-203ENST00000563623 SDSP20132 328 aa14.5□□□□□ -0.09
ABCA3-203ENST00000563623 NEK4P51957 841 aa14.5□□□□□ -0.09
ABCA3-203ENST00000563623 SULT6B1Q6IMI4 303 aa14.5□□□□□ -0.09
ABCA3-203ENST00000563623 ZSCAN30Q86W11 494 aa14.49□□□□□ -0.09
ABCA3-203ENST00000563623 MPNDQ8N594 471 aa14.49□□□□□ -0.09
ABCA3-203ENST00000563623 RILPL2Q969X0 211 aa14.49□□□□□ -0.09
ABCA3-203ENST00000563623 CFAP44Q96MT7 982 aa14.49□□□□□ -0.09
ABCA3-203ENST00000563623 SETBP1Q9Y6X0 1596 aa14.49□□□□□ -0.09
ABCA3-203ENST00000563623 GLI2P10070 1586 aa14.49□□□□□ -0.09
ABCA3-203ENST00000563623 MROH1Q8NDA8 1641 aa14.49□□□□□ -0.09
ABCA3-203ENST00000563623 REC8O95072 547 aa14.48□□□□□ -0.09
ABCA3-203ENST00000563623 TXNDC2Q86VQ3 553 aa14.48□□□□□ -0.09
ABCA3-203ENST00000563623 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.48□□□□□ -0.09
ABCA3-203ENST00000563623 ZSCAN23Q3MJ62 389 aa14.48□□□□□ -0.09
ABCA3-203ENST00000563623 AEBP1Q8IUX7 1158 aa14.48□□□□□ -0.09
ABCA3-203ENST00000563623 MEIS3Q99687 375 aa14.48□□□□□ -0.09
ABCA3-203ENST00000563623 USP26Q9BXU7 913 aa14.48□□□□□ -0.09
ABCA3-203ENST00000563623 FAM13BQ9NYF5 915 aa14.48□□□□□ -0.09
ABCA3-203ENST00000563623 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
ABCA3-203ENST00000563623 DCTPP1Q9H773 170 aa14.47□□□□□ -0.09
ABCA3-203ENST00000563623 F6X3S4 739 aa14.47□□□□□ -0.09
ABCA3-203ENST00000563623 SYCE3A1L190 88 aa14.47□□□□□ -0.09
ABCA3-203ENST00000563623 HMMRO75330 724 aa14.46□□□□□ -0.09
ABCA3-203ENST00000563623 PRIM1P49642 420 aaKnown RBP14.46□□□□□ -0.09
ABCA3-203ENST00000563623 XPCQ01831 940 aaPredicted RBP14.46□□□□□ -0.09
ABCA3-203ENST00000563623 DNTTIP2Q5QJE6 756 aaKnown RBP14.46□□□□□ -0.09
ABCA3-203ENST00000563623 EXOC6BQ9Y2D4 811 aa14.46□□□□□ -0.09
ABCA3-203ENST00000563623 AK9Q5TCS8 1911 aa14.46□□□□□ -0.09
ABCA3-203ENST00000563623 PLCB2Q00722 1185 aa14.46□□□□□ -0.09
ABCA3-203ENST00000563623 ANO2Q9NQ90 1003 aa14.46□□□□□ -0.09
ABCA3-203ENST00000563623 ARAP3Q8WWN8 1544 aa14.46□□□□□ -0.09
ABCA3-203ENST00000563623 ABCC4O15439 1325 aa14.46□□□□□ -0.09
ABCA3-203ENST00000563623 MYO3AQ8NEV4 1616 aa14.46□□□□□ -0.09
ABCA3-203ENST00000563623 NCOA3Q9Y6Q9 1424 aa14.46□□□□□ -0.1
ABCA3-203ENST00000563623 RBSNQ9H1K0 784 aa14.46□□□□□ -0.1
ABCA3-203ENST00000563623 YTHDC2Q9H6S0 1430 aaKnown RBP14.45□□□□□ -0.1
ABCA3-203ENST00000563623 IL13P35225 146 aa14.45□□□□□ -0.1
ABCA3-203ENST00000563623 PLPPR3Q6T4P5 718 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms