RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 KIAA2012Q0VF49 1180 aa15.64■□□□□ 0.09
CCDC187-201ENST00000563590 JARID2Q92833 1246 aaPredicted RBP15.64■□□□□ 0.09
CCDC187-201ENST00000563590 ZNF830Q96NB3 372 aaPredicted RBP15.64■□□□□ 0.09
CCDC187-201ENST00000563590 ZFYVE16Q7Z3T8 1539 aa15.63■□□□□ 0.09
CCDC187-201ENST00000563590 ABCA6Q8N139 1617 aa15.63■□□□□ 0.09
CCDC187-201ENST00000563590 DCTN1Q14203 1278 aa15.63■□□□□ 0.09
CCDC187-201ENST00000563590 SLC4A10Q6U841 1118 aa15.63■□□□□ 0.09
CCDC187-201ENST00000563590 KIF2CQ99661 725 aa15.63■□□□□ 0.09
CCDC187-201ENST00000563590 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
CCDC187-201ENST00000563590 CHD1LQ86WJ1 897 aa15.63■□□□□ 0.09
CCDC187-201ENST00000563590 RBSNQ9H1K0 784 aa15.63■□□□□ 0.09
CCDC187-201ENST00000563590 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
CCDC187-201ENST00000563590 CT47B1P0C2W7 299 aaPredicted RBP15.62■□□□□ 0.09
CCDC187-201ENST00000563590 ZSCAN23Q3MJ62 389 aa15.62■□□□□ 0.09
CCDC187-201ENST00000563590 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
CCDC187-201ENST00000563590 ABCA9Q8IUA7 1624 aa15.62■□□□□ 0.09
CCDC187-201ENST00000563590 HDGFP51858 240 aaKnown RBP15.61■□□□□ 0.09
CCDC187-201ENST00000563590 TMPOP42166 694 aaKnown RBP15.61■□□□□ 0.09
CCDC187-201ENST00000563590 RBM33Q96EV2 1170 aaKnown RBP15.61■□□□□ 0.09
CCDC187-201ENST00000563590 CSPP1Q1MSJ5 1256 aa15.61■□□□□ 0.09
CCDC187-201ENST00000563590 RRS1Q15050 365 aaKnown RBP15.6■□□□□ 0.09
CCDC187-201ENST00000563590 TAOK2Q9UL54 1235 aa15.6■□□□□ 0.09
CCDC187-201ENST00000563590 TRIM35Q9UPQ4 493 aa15.6■□□□□ 0.09
CCDC187-201ENST00000563590 NCKAP5LQ9HCH0 1330 aa15.6■□□□□ 0.09
CCDC187-201ENST00000563590 MAP3K4Q9Y6R4 1608 aa15.6■□□□□ 0.09
CCDC187-201ENST00000563590 NEO1Q92859 1461 aa15.6■□□□□ 0.09
CCDC187-201ENST00000563590 IPO8O15397 1037 aaKnown RBP15.6■□□□□ 0.09
CCDC187-201ENST00000563590 TXNDC2Q86VQ3 553 aa15.6■□□□□ 0.09
CCDC187-201ENST00000563590 SBNO2Q9Y2G9 1366 aa15.6■□□□□ 0.09
CCDC187-201ENST00000563590 KLHL40Q2TBA0 621 aa15.59■□□□□ 0.09
CCDC187-201ENST00000563590 KIAA1210Q9ULL0 1709 aa15.59■□□□□ 0.09
CCDC187-201ENST00000563590 NPATQ14207 1427 aa15.59■□□□□ 0.09
CCDC187-201ENST00000563590 BMP2KLQ5H9B9 411 aa15.59■□□□□ 0.09
CCDC187-201ENST00000563590 TBC1D9Q6ZT07 1266 aa15.59■□□□□ 0.09
CCDC187-201ENST00000563590 HDGFL2Q7Z4V5 671 aaPredicted RBP15.59■□□□□ 0.09
CCDC187-201ENST00000563590 PKP1Q13835 747 aa15.58■□□□□ 0.08
CCDC187-201ENST00000563590 PPP1R9BQ96SB3 815 aa15.58■□□□□ 0.08
CCDC187-201ENST00000563590 ZRANB1Q9UGI0 708 aa15.58■□□□□ 0.08
CCDC187-201ENST00000563590 EID1Q9Y6B2 187 aa15.58■□□□□ 0.08
CCDC187-201ENST00000563590 MYOM2P54296 1465 aa15.58■□□□□ 0.08
CCDC187-201ENST00000563590 CDK11BP21127 795 aaKnown RBP15.57■□□□□ 0.08
CCDC187-201ENST00000563590 C17orf53Q8N3J3 647 aaPredicted RBP15.57■□□□□ 0.08
CCDC187-201ENST00000563590 MIS18AQ9NYP9 233 aa15.57■□□□□ 0.08
CCDC187-201ENST00000563590 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
CCDC187-201ENST00000563590 EVC2Q86UK5 1308 aa15.57■□□□□ 0.08
CCDC187-201ENST00000563590 PRKAR2BP31323 418 aa15.57■□□□□ 0.08
CCDC187-201ENST00000563590 KIF16BQ96L93 1317 aa15.56■□□□□ 0.08
CCDC187-201ENST00000563590 NUCB2P80303 420 aa15.56■□□□□ 0.08
CCDC187-201ENST00000563590 ZNF771Q7L3S4 317 aaPredicted RBP15.56■□□□□ 0.08
CCDC187-201ENST00000563590 PLEKHF1Q96S99 279 aa15.56■□□□□ 0.08
CCDC187-201ENST00000563590 SASS6Q6UVJ0 657 aa15.56■□□□□ 0.08
CCDC187-201ENST00000563590 GDPD2Q9HCC8 539 aa15.56■□□□□ 0.08
CCDC187-201ENST00000563590 MLH3Q9UHC1 1453 aa15.55■□□□□ 0.08
CCDC187-201ENST00000563590 ZKSCAN5Q9Y2L8 839 aa15.55■□□□□ 0.08
CCDC187-201ENST00000563590 TET3O43151 1660 aa15.55■□□□□ 0.08
CCDC187-201ENST00000563590 CASC1Q6TDU7 716 aa15.55■□□□□ 0.08
CCDC187-201ENST00000563590 C14orf93Q9H972 538 aaKnown RBP15.55■□□□□ 0.08
CCDC187-201ENST00000563590 ST18O60284 1047 aa15.54■□□□□ 0.08
CCDC187-201ENST00000563590 DIAPH1O60610 1272 aaKnown RBP15.54■□□□□ 0.08
CCDC187-201ENST00000563590 CHAF1AQ13111 956 aaPredicted RBP15.54■□□□□ 0.08
CCDC187-201ENST00000563590 NCBP3Q53F19 620 aaKnown RBP15.54■□□□□ 0.08
CCDC187-201ENST00000563590 ZGPATQ8N5A5 531 aaKnown RBP15.54■□□□□ 0.08
CCDC187-201ENST00000563590 TERF2IPQ9NYB0 399 aa15.54■□□□□ 0.08
CCDC187-201ENST00000563590 PPP4R3BQ5MIZ7 849 aa15.54■□□□□ 0.08
CCDC187-201ENST00000563590 ABCC11Q96J66 1382 aa15.54■□□□□ 0.08
CCDC187-201ENST00000563590 ARAP3Q8WWN8 1544 aa15.53■□□□□ 0.08
CCDC187-201ENST00000563590 DYNC1I1O14576 645 aa15.53■□□□□ 0.08
CCDC187-201ENST00000563590 MTERF4Q7Z6M4 381 aaKnown RBP15.53■□□□□ 0.08
CCDC187-201ENST00000563590 FAM83GA6ND36 823 aa15.53■□□□□ 0.08
CCDC187-201ENST00000563590 BBXQ8WY36 941 aaPredicted RBP15.53■□□□□ 0.08
CCDC187-201ENST00000563590 NOL7Q9UMY1 257 aaKnown RBP15.53■□□□□ 0.08
CCDC187-201ENST00000563590 RPGRIP1LQ68CZ1 1315 aa15.52■□□□□ 0.08
CCDC187-201ENST00000563590 CDC45O75419 566 aa15.52■□□□□ 0.08
CCDC187-201ENST00000563590 ADGRB2O60241 1585 aa15.52■□□□□ 0.07
CCDC187-201ENST00000563590 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.07
CCDC187-201ENST00000563590 CDK19Q9BWU1 502 aa15.51■□□□□ 0.07
CCDC187-201ENST00000563590 TTC12Q9H892 705 aaPredicted RBP15.51■□□□□ 0.07
CCDC187-201ENST00000563590 PRDM4Q9UKN5 801 aa15.51■□□□□ 0.07
CCDC187-201ENST00000563590 CHMP3Q9Y3E7 222 aa15.51■□□□□ 0.07
CCDC187-201ENST00000563590 PPIP5K1Q6PFW1 1433 aa15.51■□□□□ 0.07
CCDC187-201ENST00000563590 SPC24Q8NBT2 197 aa15.51■□□□□ 0.07
CCDC187-201ENST00000563590 MYO3AQ8NEV4 1616 aa15.5■□□□□ 0.07
CCDC187-201ENST00000563590 GCC1Q96CN9 775 aa15.5■□□□□ 0.07
CCDC187-201ENST00000563590 USP25Q9UHP3 1055 aa15.5■□□□□ 0.07
CCDC187-201ENST00000563590 ZBTB7BO15156 539 aaPredicted RBP15.5■□□□□ 0.07
CCDC187-201ENST00000563590 IL16Q14005 1332 aa15.5■□□□□ 0.07
CCDC187-201ENST00000563590 ANKRD36BQ8N2N9 1353 aa15.5■□□□□ 0.07
CCDC187-201ENST00000563590 DRC7Q8IY82 874 aa15.49■□□□□ 0.07
CCDC187-201ENST00000563590 NEK4P51957 841 aa15.49■□□□□ 0.07
CCDC187-201ENST00000563590 SMAP1Q8IYB5 467 aaPredicted RBP15.49■□□□□ 0.07
CCDC187-201ENST00000563590 TSPY26PQ9H489 355 aa15.49■□□□□ 0.07
CCDC187-201ENST00000563590 HECW2Q9P2P5 1572 aa15.49■□□□□ 0.07
CCDC187-201ENST00000563590 CLEC17AQ6ZS10 378 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 DEPDC5O75140 1603 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 ZNF445P59923 1031 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 ALDH1L2Q3SY69 923 aa15.48■□□□□ 0.07
CCDC187-201ENST00000563590 CGNQ9P2M7 1197 aaKnown RBP15.48■□□□□ 0.07
CCDC187-201ENST00000563590 NRXN1Q9ULB1 1477 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms