RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PUS10Q3MIT2 529 aaKnown RBP6.09□□□□□ -1.43
SMG1-207ENST00000563235 DCAF8Q5TAQ9 597 aa6.09□□□□□ -1.43
SMG1-207ENST00000563235 JDP2Q8WYK2 163 aa6.09□□□□□ -1.43
SMG1-207ENST00000563235 LARP6Q9BRS8 491 aaKnown RBP6.09□□□□□ -1.43
SMG1-207ENST00000563235 DDX56Q9NY93 547 aaKnown RBP6.09□□□□□ -1.43
SMG1-207ENST00000563235 GOLIM4O00461 696 aa6.09□□□□□ -1.44
SMG1-207ENST00000563235 SOCS7O14512 581 aa6.09□□□□□ -1.44
SMG1-207ENST00000563235 S100BP04271 92 aaPredicted RBP6.09□□□□□ -1.44
SMG1-207ENST00000563235 AXDND1Q5T1B0 1012 aaPredicted RBP6.09□□□□□ -1.44
SMG1-207ENST00000563235 FILIP1Q7Z7B0 1213 aa6.09□□□□□ -1.44
SMG1-207ENST00000563235 NT5DC4Q86YG4 428 aa6.09□□□□□ -1.44
SMG1-207ENST00000563235 NEUROD6Q96NK8 337 aa6.09□□□□□ -1.44
SMG1-207ENST00000563235 BSDC1Q9NW68 430 aaPredicted RBP6.09□□□□□ -1.44
SMG1-207ENST00000563235 RSF1Q96T23 1441 aaPredicted RBP6.08□□□□□ -1.44
SMG1-207ENST00000563235 LMOD1P29536 600 aaPredicted RBP6.08□□□□□ -1.44
SMG1-207ENST00000563235 SCNN1AP37088 669 aa6.08□□□□□ -1.44
SMG1-207ENST00000563235 LDLRAD1Q5T700 205 aa6.08□□□□□ -1.44
SMG1-207ENST00000563235 OTUD6BQ8N6M0 293 aa6.08□□□□□ -1.44
SMG1-207ENST00000563235 ZBTB47Q9UFB7 747 aaPredicted RBP6.08□□□□□ -1.44
SMG1-207ENST00000563235 PUF60Q9UHX1 559 aaKnown RBP6.08□□□□□ -1.44
SMG1-207ENST00000563235 PALM3A6NDB9 673 aaPredicted RBP6.08□□□□□ -1.44
SMG1-207ENST00000563235 NRDCO43847 1150 aa6.08□□□□□ -1.44
SMG1-207ENST00000563235 EGFL6Q8IUX8 553 aa6.08□□□□□ -1.44
SMG1-207ENST00000563235 RAVER1Q8IY67 606 aaKnown RBP6.08□□□□□ -1.44
SMG1-207ENST00000563235 PAGR1Q9BTK6 254 aa6.08□□□□□ -1.44
SMG1-207ENST00000563235 ZRANB2O95218 330 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMG1-207ENST00000563235 DHX8Q14562 1220 aaKnown RBP6.07□□□□□ -1.44
SMG1-207ENST00000563235 RGL3Q3MIN7 710 aa6.07□□□□□ -1.44
SMG1-207ENST00000563235 TTC39BQ5VTQ0 682 aaPredicted RBP6.07□□□□□ -1.44
SMG1-207ENST00000563235 TTF2Q9UNY4 1162 aaKnown RBP6.07□□□□□ -1.44
SMG1-207ENST00000563235 GIGYF1O75420 1035 aaPredicted RBP6.07□□□□□ -1.44
SMG1-207ENST00000563235 TSR2Q969E8 191 aaKnown RBP6.07□□□□□ -1.44
SMG1-207ENST00000563235 TRIM34Q9BYJ4 488 aa6.07□□□□□ -1.44
SMG1-207ENST00000563235 LMTK3Q96Q04 1460 aa6.07□□□□□ -1.44
SMG1-207ENST00000563235 SOWAHDA6NJG2 315 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 PRC1O43663 620 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 RFC5P40937 340 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 USP5P45974 858 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 ENOX2Q16206 610 aaKnown RBP6.06□□□□□ -1.44
SMG1-207ENST00000563235 FBXO41Q8TF61 875 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 SLC39A13Q96H72 371 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 ATG7O95352 703 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 APPP05067 770 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 FAM163BP0C2L3 166 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 XPCQ01831 940 aaPredicted RBP6.06□□□□□ -1.44
SMG1-207ENST00000563235 MSL3Q8N5Y2 521 aaKnown RBP6.06□□□□□ -1.44
SMG1-207ENST00000563235 MPHOSPH6Q99547 160 aaKnown RBP6.06□□□□□ -1.44
SMG1-207ENST00000563235 CHST12Q9NRB3 414 aa6.06□□□□□ -1.44
SMG1-207ENST00000563235 POU5F1Q01860 360 aaKnown RBP6.05□□□□□ -1.44
SMG1-207ENST00000563235 ZNF746Q6NUN9 644 aaPredicted RBP6.05□□□□□ -1.44
SMG1-207ENST00000563235 LRRC27Q9C0I9 530 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 TCEAL9Q9UHQ7 104 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 CT47B1P0C2W7 299 aaPredicted RBP6.05□□□□□ -1.44
SMG1-207ENST00000563235 TNNI2P48788 182 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 PSEN1P49768 467 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 TERF1P54274 439 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 PDILTQ8N807 584 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 ZNF830Q96NB3 372 aaPredicted RBP6.05□□□□□ -1.44
SMG1-207ENST00000563235 THRAP3Q9Y2W1 955 aaKnown RBP6.05□□□□□ -1.44
SMG1-207ENST00000563235 ATP2B1P20020 1258 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 UBE4AQ14139 1066 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 UCN2Q96RP3 112 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 SLAIN2Q9P270 581 aa6.05□□□□□ -1.44
SMG1-207ENST00000563235 ATAD2BQ9ULI0 1458 aa6.04□□□□□ -1.44
SMG1-207ENST00000563235 LDHAP00338 332 aaKnown RBP6.04□□□□□ -1.44
SMG1-207ENST00000563235 CD53P19397 219 aa6.04□□□□□ -1.44
SMG1-207ENST00000563235 MNX1P50219 401 aaPredicted RBP6.04□□□□□ -1.44
SMG1-207ENST00000563235 CBLBQ13191 982 aa6.04□□□□□ -1.44
SMG1-207ENST00000563235 HDAC1Q13547 482 aaPredicted RBP6.04□□□□□ -1.44
SMG1-207ENST00000563235 STK32AQ8WU08 396 aa6.04□□□□□ -1.44
SMG1-207ENST00000563235 BRINP2Q9C0B6 783 aa6.04□□□□□ -1.44
SMG1-207ENST00000563235 IGF1RP08069 1367 aa6.04□□□□□ -1.44
SMG1-207ENST00000563235 PCGF5Q86SE9 256 aa6.04□□□□□ -1.44
SMG1-207ENST00000563235 EPAS1Q99814 870 aa6.04□□□□□ -1.44
SMG1-207ENST00000563235 AMPD3Q01432 767 aa6.03□□□□□ -1.44
SMG1-207ENST00000563235 RNF187Q5TA31 235 aaPredicted RBP6.03□□□□□ -1.44
SMG1-207ENST00000563235 PPP1R18Q6NYC8 613 aa6.03□□□□□ -1.44
SMG1-207ENST00000563235 METTL16Q86W50 562 aaKnown RBP6.03□□□□□ -1.44
SMG1-207ENST00000563235 ZCRB1Q8TBF4 217 aaKnown RBP6.03□□□□□ -1.44
SMG1-207ENST00000563235 CEP63Q96MT8 703 aa6.03□□□□□ -1.44
SMG1-207ENST00000563235 CARD10Q9BWT7 1032 aa6.03□□□□□ -1.44
SMG1-207ENST00000563235 SCINQ9Y6U3 715 aa6.03□□□□□ -1.44
SMG1-207ENST00000563235 TMEM164Q5U3C3 297 aa6.03□□□□□ -1.44
SMG1-207ENST00000563235 IER2Q9BTL4 223 aa6.03□□□□□ -1.44
SMG1-207ENST00000563235 MUC3BQ9H195 1237 aa6.03□□□□□ -1.44
SMG1-207ENST00000563235 RSPH9Q9H1X1 276 aaPredicted RBP6.03□□□□□ -1.44
SMG1-207ENST00000563235 TFIP11Q9UBB9 837 aaKnown RBP6.03□□□□□ -1.44
SMG1-207ENST00000563235 GALR2O43603 387 aaPredicted RBP6.02□□□□□ -1.45
SMG1-207ENST00000563235 NGDNQ8NEJ9 315 aaKnown RBP6.02□□□□□ -1.45
SMG1-207ENST00000563235 YTHDC1Q96MU7 727 aaKnown RBP6.02□□□□□ -1.45
SMG1-207ENST00000563235 ZMIZ1Q9ULJ6 1067 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 LDHCP07864 332 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 DNAJA1P31689 397 aaKnown RBP6.02□□□□□ -1.45
SMG1-207ENST00000563235 RASSF7Q02833 373 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 ODR4Q5SWX8 454 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 ZNF513Q8N8E2 541 aaPredicted RBP6.02□□□□□ -1.45
SMG1-207ENST00000563235 TSC1Q92574 1164 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 MKL1Q969V6 931 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 BIN2Q9UBW5 565 aaPredicted RBP6.02□□□□□ -1.45
SMG1-207ENST00000563235 CAMK2BQ13554 666 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms